Literature DB >> 33128777

Short tandem repeat profiling for the authentication of cancer stem-like cells.

Paola Visconti1, Federica Parodi1, Barbara Parodi1, Lucia Casarino2, Paolo Romano3, Mariachiara Buccarelli4, Roberto Pallini5, Quintino Giorgio D'Alessandris5, Andrea Montori6, Emanuela Pilozzi6, Lucia Ricci-Vitiani4.   

Abstract

Colorectal and glioblastoma cancer stem-like cells (CSCs) are essential for translational research. Cell line authentication by short tandem repeat (STR) profiling ensures reproducibility of results in oncology research. This technique enables to identify mislabeling or cross-contamination of cell lines. In our study, we provide a reference dataset for a panel of colorectal and glioblastoma CSCs that allows authentication. Each cell line was entered into the cell Line Integrated Molecular Authentication database 2.1 to be compared to the STR profiles of 4485 tumor cell lines. This article also provides clinical data of patients from whom CSCs arose and data on the parent tumor stage and mutations. STR profiles and information of our CSCs are also available in the Cellosaurus database (ExPASy) as identified by unique research resource identifier codes.
© 2020 The Authors. International Journal of Cancer published by John Wiley & Sons Ltd on behalf of Union for International Cancer Control.

Entities:  

Keywords:  cell line authentication; colorectal tumor; glioblastoma; human stem-like cell lines; short tandem repeat profiling

Year:  2020        PMID: 33128777      PMCID: PMC7894552          DOI: 10.1002/ijc.33370

Source DB:  PubMed          Journal:  Int J Cancer        ISSN: 0020-7136            Impact factor:   7.396


  29 in total

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Authors:  Annelien L Bredenoord; Menno Mostert; Rosario Isasi; Bartha M Knoppers
Journal:  Regen Med       Date:  2015-10-27       Impact factor: 3.806

2.  Match criteria for human cell line authentication: where do we draw the line?

Authors:  Amanda Capes-Davis; Yvonne A Reid; Margaret C Kline; Douglas R Storts; Ethan Strauss; Wilhelm G Dirks; Hans G Drexler; Roderick A F MacLeod; Gregory Sykes; Arihiro Kohara; Yukio Nakamura; Eugene Elmore; Raymond W Nims; Christine Alston-Roberts; Rita Barallon; Georgyi V Los; Roland M Nardone; Paul J Price; Anton Steuer; Jim Thomson; John R W Masters; Liz Kerrigan
Journal:  Int J Cancer       Date:  2012-11-28       Impact factor: 7.396

3.  A human X-Y homologous region encodes "amelogenin".

Authors:  Y Nakahori; O Takenaka; Y Nakagome
Journal:  Genomics       Date:  1991-02       Impact factor: 5.736

4.  Identification and expansion of human colon-cancer-initiating cells.

Authors:  Lucia Ricci-Vitiani; Dario G Lombardi; Emanuela Pilozzi; Mauro Biffoni; Matilde Todaro; Cesare Peschle; Ruggero De Maria
Journal:  Nature       Date:  2006-11-19       Impact factor: 49.962

5.  Inactivation of the DNA repair gene O6-methylguanine-DNA methyltransferase by promoter hypermethylation is a common event in primary human neoplasia.

Authors:  M Esteller; S R Hamilton; P C Burger; S B Baylin; J G Herman
Journal:  Cancer Res       Date:  1999-02-15       Impact factor: 12.701

6.  Cancer Stem Cell-Based Models of Colorectal Cancer Reveal Molecular Determinants of Therapy Resistance.

Authors:  Maria Laura De Angelis; Ann Zeuner; Eleonora Policicchio; Giorgio Russo; Alessandro Bruselles; Michele Signore; Sara Vitale; Gabriele De Luca; Emanuela Pilozzi; Alessandra Boe; Giorgio Stassi; Lucia Ricci-Vitiani; Carla Azzurra Amoreo; Alfredo Pagliuca; Federica Francescangeli; Marco Tartaglia; Ruggero De Maria; Marta Baiocchi
Journal:  Stem Cells Transl Med       Date:  2016-03-08       Impact factor: 6.940

7.  Cancer stem cell analysis and clinical outcome in patients with glioblastoma multiforme.

Authors:  Roberto Pallini; Lucia Ricci-Vitiani; Giuseppe Luigi Banna; Michele Signore; Dario Lombardi; Matilde Todaro; Giorgio Stassi; Maurizio Martini; Giulio Maira; Luigi Maria Larocca; Ruggero De Maria
Journal:  Clin Cancer Res       Date:  2008-12-15       Impact factor: 12.531

8.  The clinical value of patient-derived glioblastoma tumorspheres in predicting treatment response.

Authors:  Quintino Giorgio D'Alessandris; Mauro Biffoni; Maurizio Martini; Daniele Runci; Mariachiara Buccarelli; Tonia Cenci; Michele Signore; Louis Stancato; Alessandro Olivi; Ruggero De Maria; Luigi M Larocca; Lucia Ricci-Vitiani; Roberto Pallini
Journal:  Neuro Oncol       Date:  2017-08-01       Impact factor: 12.300

9.  Identifiability and privacy in pluripotent stem cell research.

Authors:  Rosario Isasi; Peter W Andrews; Jay M Baltz; Annelien L Bredenoord; Paul Burton; Ing-Ming Chiu; Sara Chandros Hull; Ji-Won Jung; Andreas Kurtz; Geoffrey Lomax; Tenneille Ludwig; Michael McDonald; Clive Morris; Huck Hui Ng; Heather Rooke; Alka Sharma; Glyn N Stacey; Clare Williams; Fanyi Zeng; Bartha Maria Knoppers
Journal:  Cell Stem Cell       Date:  2014-04-03       Impact factor: 24.633

10.  Cell Line Data Base: structure and recent improvements towards molecular authentication of human cell lines.

Authors:  Paolo Romano; Assunta Manniello; Ottavia Aresu; Massimiliano Armento; Michela Cesaro; Barbara Parodi
Journal:  Nucleic Acids Res       Date:  2008-10-15       Impact factor: 16.971

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  6 in total

1.  MiR-378a-3p Acts as a Tumor Suppressor in Colorectal Cancer Stem-Like Cells and Affects the Expression of MALAT1 and NEAT1 lncRNAs.

Authors:  Giorgia Castellani; Mariachiara Buccarelli; Valentina Lulli; Ramona Ilari; Gabriele De Luca; Francesca Pedini; Alessandra Boe; Nadia Felli; Mauro Biffoni; Emanuela Pilozzi; Giovanna Marziali; Lucia Ricci-Vitiani
Journal:  Front Oncol       Date:  2022-06-24       Impact factor: 5.738

2.  Effects of the Combined Treatment with a G-Quadruplex-Stabilizing Ligand and Photon Beams on Glioblastoma Stem-like Cells: A Magnetic Resonance Study.

Authors:  Alessandra Palma; Sveva Grande; Anna Maria Luciani; Lucia Ricci-Vitiani; Mariachiara Buccarelli; Roberto Pallini; Alice Triveri; Valentina Pirota; Filippo Doria; Quintino Giorgio D'Alessandris; Francesco Berardinelli; Antonio Antoccia; Antonella Rosi
Journal:  Int J Mol Sci       Date:  2021-11-24       Impact factor: 5.923

3.  Chlorpromazine induces cytotoxic autophagy in glioblastoma cells via endoplasmic reticulum stress and unfolded protein response.

Authors:  Silvia Matteoni; Paola Matarrese; Barbara Ascione; Lucia Ricci-Vitiani; Roberto Pallini; Veronica Villani; Andrea Pace; Marco G Paggi; Claudia Abbruzzese
Journal:  J Exp Clin Cancer Res       Date:  2021-11-05

4.  Highly Potent and Selective Dopamine D4 Receptor Antagonists Potentially Useful for the Treatment of Glioblastoma.

Authors:  Pegi Pavletić; Ana Semeano; Hideaki Yano; Alessandro Bonifazi; Gianfabio Giorgioni; Alessandro Piergentili; Wilma Quaglia; Maria Giovanna Sabbieti; Dimitrios Agas; Giorgio Santoni; Roberto Pallini; Lucia Ricci-Vitiani; Emanuela Sabato; Giulio Vistoli; Fabio Del Bello
Journal:  J Med Chem       Date:  2022-09-13       Impact factor: 8.039

5.  Short tandem repeat profiling for the authentication of cancer stem-like cells.

Authors:  Paola Visconti; Federica Parodi; Barbara Parodi; Lucia Casarino; Paolo Romano; Mariachiara Buccarelli; Roberto Pallini; Quintino Giorgio D'Alessandris; Andrea Montori; Emanuela Pilozzi; Lucia Ricci-Vitiani
Journal:  Int J Cancer       Date:  2020-11-09       Impact factor: 7.396

6.  Elesclomol-induced increase of mitochondrial reactive oxygen species impairs glioblastoma stem-like cell survival and tumor growth.

Authors:  Mauro Biffoni; Roberto Pallini; Lucia Ricci-Vitiani; Mariachiara Buccarelli; Quintino Giorgio D'Alessandris; Paola Matarrese; Cristiana Mollinari; Michele Signore; Andrea Cappannini; Maurizio Martini; Pierluigi D'Aliberti; Gabriele De Luca; Francesca Pedini; Alessandra Boe
Journal:  J Exp Clin Cancer Res       Date:  2021-07-12
  6 in total

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