Literature DB >> 33125082

Acetylation-modulated communication between the H3 N-terminal tail domain and the intrinsically disordered H1 C-terminal domain.

Fanfan Hao1, Kevin J Murphy1, Tomoya Kujirai2, Naoki Kamo3, Junko Kato2, Masako Koyama2, Akimitsu Okamato3,4, Gosuke Hayashi5, Hitoshi Kurumizaka2, Jeffrey J Hayes1.   

Abstract

Linker histones (H1s) are key structural components of the chromatin of higher eukaryotes. However, the mechanisms by which the intrinsically disordered linker histone carboxy-terminal domain (H1 CTD) influences chromatin structure and gene regulation remain unclear. We previously demonstrated that the CTD of H1.0 undergoes a significant condensation (reduction of end-to-end distance) upon binding to nucleosomes, consistent with a transition to an ordered structure or ensemble of structures. Here, we show that deletion of the H3 N-terminal tail or the installation of acetylation mimics or bona fide acetylation within H3 N-terminal tail alters the condensation of the nucleosome-bound H1 CTD. Additionally, we present evidence that the H3 N-tail influences H1 CTD condensation through direct protein-protein interaction, rather than alterations in linker DNA trajectory. These results support an emerging hypothesis wherein the H1 CTD serves as a nexus for signaling in the nucleosome.
© The Author(s) 2020. Published by Oxford University Press on behalf of Nucleic Acids Research.

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Year:  2020        PMID: 33125082      PMCID: PMC7672455          DOI: 10.1093/nar/gkaa949

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  55 in total

1.  Preferential interaction of the core histone tail domains with linker DNA.

Authors:  D Angelov; J M Vitolo; V Mutskov; S Dimitrov; J J Hayes
Journal:  Proc Natl Acad Sci U S A       Date:  2001-05-29       Impact factor: 11.205

2.  Single-base resolution mapping of H1-nucleosome interactions and 3D organization of the nucleosome.

Authors:  Sajad Hussain Syed; Damien Goutte-Gattat; Nils Becker; Sam Meyer; Manu Shubhdarshan Shukla; Jeffrey J Hayes; Ralf Everaers; Dimitar Angelov; Jan Bednar; Stefan Dimitrov
Journal:  Proc Natl Acad Sci U S A       Date:  2010-05-10       Impact factor: 11.205

3.  Gene induction and repression during terminal erythropoiesis are mediated by distinct epigenetic changes.

Authors:  Piu Wong; Shilpa M Hattangadi; Albert W Cheng; Garrett M Frampton; Richard A Young; Harvey F Lodish
Journal:  Blood       Date:  2011-08-22       Impact factor: 22.113

Review 4.  A brief review of nucleosome structure.

Authors:  Amber R Cutter; Jeffrey J Hayes
Journal:  FEBS Lett       Date:  2015-05-14       Impact factor: 4.124

5.  Drosophila H1 regulates the genetic activity of heterochromatin by recruitment of Su(var)3-9.

Authors:  Xingwu Lu; Sandeep N Wontakal; Harsh Kavi; Byung Ju Kim; Paloma M Guzzardo; Alexander V Emelyanov; Na Xu; Gregory J Hannon; Jiri Zavadil; Dmitry V Fyodorov; Arthur I Skoultchi
Journal:  Science       Date:  2013-04-05       Impact factor: 47.728

6.  The conformation of the histone H3 tail inhibits association of the BPTF PHD finger with the nucleosome.

Authors:  Emma A Morrison; Samuel Bowerman; Kelli L Sylvers; Jeff Wereszczynski; Catherine A Musselman
Journal:  Elife       Date:  2018-04-12       Impact factor: 8.140

Review 7.  Histone chaperone networks shaping chromatin function.

Authors:  Colin M Hammond; Caroline B Strømme; Hongda Huang; Dinshaw J Patel; Anja Groth
Journal:  Nat Rev Mol Cell Biol       Date:  2017-01-05       Impact factor: 94.444

8.  A direct link between core histone acetylation and transcriptionally active chromatin.

Authors:  T R Hebbes; A W Thorne; C Crane-Robinson
Journal:  EMBO J       Date:  1988-05       Impact factor: 11.598

Review 9.  The molecular hallmarks of epigenetic control.

Authors:  C David Allis; Thomas Jenuwein
Journal:  Nat Rev Genet       Date:  2016-06-27       Impact factor: 53.242

10.  High-resolution mapping of h1 linker histone variants in embryonic stem cells.

Authors:  Kaixiang Cao; Nathalie Lailler; Yunzhe Zhang; Ashwath Kumar; Karan Uppal; Zheng Liu; Eva K Lee; Hongwei Wu; Magdalena Medrzycki; Chenyi Pan; Po-Yi Ho; Guy P Cooper; Xiao Dong; Christoph Bock; Eric E Bouhassira; Yuhong Fan
Journal:  PLoS Genet       Date:  2013-04-25       Impact factor: 5.917

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  2 in total

Review 1.  Unraveling linker histone interactions in nucleosomes.

Authors:  Fanfan Hao; Seyit Kale; Stefan Dimitrov; Jeffrey J Hayes
Journal:  Curr Opin Struct Biol       Date:  2021-07-08       Impact factor: 6.809

Review 2.  Transcriptionally Active Chromatin-Lessons Learned from the Chicken Erythrocyte Chromatin Fractionation.

Authors:  Tasnim H Beacon; James R Davie
Journal:  Cells       Date:  2021-05-30       Impact factor: 6.600

  2 in total

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