Literature DB >> 33120413

Real-time clinical note monitoring to detect conditions for rapid follow-up: A case study of clinical trial enrollment in drug-induced torsades de pointes and Stevens-Johnson syndrome.

Sarah DeLozier1, Peter Speltz1, Jason Brito1, Leigh Anne Tang1, Janey Wang1, Joshua C Smith1, Dario Giuse1, Elizabeth Phillips2, Kristina Williams2, Teresa Strickland2, Giovanni Davogustto2, Dan Roden1,2, Joshua C Denny1,2.   

Abstract

Identifying acute events as they occur is challenging in large hospital systems. Here, we describe an automated method to detect 2 rare adverse drug events (ADEs), drug-induced torsades de pointes and Stevens-Johnson syndrome and toxic epidermal necrolysis, in near real time for participant recruitment into prospective clinical studies. A text processing system searched clinical notes from the electronic health record (EHR) for relevant keywords and alerted study personnel via email of potential patients for chart review or in-person evaluation. Between 2016 and 2018, the automated recruitment system resulted in capture of 138 true cases of drug-induced rare events, improving recall from 43% to 93%. Our focused electronic alert system maintained 2-year enrollment, including across an EHR migration from a bespoke system to Epic. Real-time monitoring of EHR notes may accelerate research for certain conditions less amenable to conventional study recruitment paradigms.
© The Author(s) 2020. Published by Oxford University Press on behalf of the American Medical Informatics Association. All rights reserved. For permissions, please email: journals.permissions@oup.com.

Entities:  

Keywords:  data mining; electronic health records; natural language processing; patient selection; precision medicine; rare diseases

Year:  2021        PMID: 33120413      PMCID: PMC7810433          DOI: 10.1093/jamia/ocaa213

Source DB:  PubMed          Journal:  J Am Med Inform Assoc        ISSN: 1067-5027            Impact factor:   4.497


  16 in total

1.  Research electronic data capture (REDCap)--a metadata-driven methodology and workflow process for providing translational research informatics support.

Authors:  Paul A Harris; Robert Taylor; Robert Thielke; Jonathon Payne; Nathaniel Gonzalez; Jose G Conde
Journal:  J Biomed Inform       Date:  2008-09-30       Impact factor: 6.317

2.  Genome-wide association study of serious blistering skin rash caused by drugs.

Authors:  Y Shen; P Nicoletti; A Floratos; M Pirmohamed; M Molokhia; P Geppetti; S Benemei; B Giomi; D Schena; A Vultaggio; R Stern; M J Daly; S John; M R Nelson; I Pe'er
Journal:  Pharmacogenomics J       Date:  2011-01-11       Impact factor: 3.550

3.  PheKB: a catalog and workflow for creating electronic phenotype algorithms for transportability.

Authors:  Jacqueline C Kirby; Peter Speltz; Luke V Rasmussen; Melissa Basford; Omri Gottesman; Peggy L Peissig; Jennifer A Pacheco; Gerard Tromp; Jyotishman Pathak; David S Carrell; Stephen B Ellis; Todd Lingren; Will K Thompson; Guergana Savova; Jonathan Haines; Dan M Roden; Paul A Harris; Joshua C Denny
Journal:  J Am Med Inform Assoc       Date:  2016-03-28       Impact factor: 4.497

Review 4.  Predicting the Unpredictable: Drug-Induced QT Prolongation and Torsades de Pointes.

Authors:  Peter J Schwartz; Raymond L Woosley
Journal:  J Am Coll Cardiol       Date:  2016-04-05       Impact factor: 24.094

Review 5.  What clinicians should know about the QT interval.

Authors:  Sana M Al-Khatib; Nancy M Allen LaPointe; Judith M Kramer; Robert M Califf
Journal:  JAMA       Date:  2003 Apr 23-30       Impact factor: 56.272

6.  Effect of a clinical trial alert system on physician participation in trial recruitment.

Authors:  Peter J Embi; Anil Jain; Jeffrey Clark; Susan Bizjack; Richard Hornung; C Martin Harris
Journal:  Arch Intern Med       Date:  2005-10-24

Review 7.  Comparing semi-automatic systems for recruitment of patients to clinical trials.

Authors:  Marc Cuggia; Paolo Besana; David Glasspool
Journal:  Int J Med Inform       Date:  2011-04-02       Impact factor: 4.046

8.  Enrollment into a time sensitive clinical study in the critical care setting: results from computerized septic shock sniffer implementation.

Authors:  Vitaly Herasevich; Matthew S Pieper; Juan Pulido; Ognjen Gajic
Journal:  J Am Med Inform Assoc       Date:  2011-04-20       Impact factor: 4.497

9.  Morbidity and Mortality of Stevens-Johnson Syndrome and Toxic Epidermal Necrolysis in United States Adults.

Authors:  Derek Y Hsu; Joaquin Brieva; Nanette B Silverberg; Jonathan I Silverberg
Journal:  J Invest Dermatol       Date:  2016-03-30       Impact factor: 8.551

10.  Automatic capture of student notes to augment mentor feedback and student performance on patient write-ups.

Authors:  Anderson Spickard; Joseph Gigante; Glenn Stein; Joshua C Denny
Journal:  J Gen Intern Med       Date:  2008-07       Impact factor: 5.128

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  3 in total

Review 1.  The Use of Electronic Health Records to Study Drug-Induced Hypersensitivity Reactions from 2000 to 2021: A Systematic Review.

Authors:  Fatima Bassir; Sheril Varghese; Liqin Wang; Yen Po Chin; Li Zhou
Journal:  Immunol Allergy Clin North Am       Date:  2022-03-31       Impact factor: 3.152

2.  The U.S. National Library of Medicine's impact on precision and genomic medicine.

Authors:  Huan Mo; Joshua C Denny
Journal:  Inf Serv Use       Date:  2022-05-10

3.  The maturation of clinical research informatics as a subdomain of biomedical informatics.

Authors:  Suzanne Bakken
Journal:  J Am Med Inform Assoc       Date:  2021-01-15       Impact factor: 4.497

  3 in total

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