| Literature DB >> 33119699 |
Jun Ho Yun1,2, Jeong-Min Kim1, Hyun Jeong Jeon3, Taekeun Oh3, Hyung Jin Choi4, Bong-Jo Kim1.
Abstract
Diabetic retinopathy (DR) is a common complication of diabetes, and it is the consequence of microvascular retinal changes due to high glucose levels over a long time. Metabolomics profiling is a rapidly evolving method used to identify the metabolites in biological fluids and investigate disease progression. In this study, we used a targeted metabolomics approach to quantify the serum metabolites in type 2 diabetes (T2D) patients. Diabetes patients were divided into three groups based on the status of their complications: non-DR (NDR, n = 143), non-proliferative DR (NPDR, n = 123), and proliferative DR (PDR, n = 51) groups. Multiple logistic regression analysis and multiple testing corrections were performed to identify the significant differences in the metabolomics profiles of the different analysis groups. The concentrations of 62 metabolites of the NDR versus DR group, 53 metabolites of the NDR versus NPDR group, and 30 metabolites of the NDR versus PDR group were found to be significantly different. Finally, sixteen metabolites were selected as specific metabolites common to NPDR and PDR. Among them, three metabolites including total DMA, tryptophan, and kynurenine were potential makers of DR progression in T2D patients. Additionally, several metabolites such as carnitines, several amino acids, and phosphatidylcholines also showed a marker potential. The metabolite signatures identified in this study will provide insight into the mechanisms underlying DR development and progression in T2D patients in future studies.Entities:
Mesh:
Year: 2020 PMID: 33119699 PMCID: PMC7595280 DOI: 10.1371/journal.pone.0241365
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Fig 1An overview of the metabolomics analysis workflow.
Clinical and biochemical characteristics of the study population.
| Clinical and biochemical parameters | NDR (n = 143) | DR (n = 174) | NPDR (n = 123) | PDR (n = 51) | ||||
|---|---|---|---|---|---|---|---|---|
| Female (%) | 37.8 | 41.9 | 0.4494 | 39.8 | 0.73 | 47.1 | < 0.01 | 0.3885 |
| Age (years) | 54.89 (11.34) | 62.18 (11.66) | < 0.01 | 62.60 (11.60) | < 0.01 | 61.18 (11.87) | 0.257 | 0.4698 |
| Height (cm) | 164.29 (8.58) | 162.95 (8.59) | 0.1878 | 162.94 (9.14) | 62.48 (10.89) | 162.97 (7.22) | 0.3061 | 0.9809 |
| Weight (kg) | 66 (10.76) | 65.95 (10.12) | 0.5602 | 66.03 (10.43) | 164.03 (7.09) | 64.99 (9.38) | 0.3771 | 0.5272 |
| BMI (kg/m2) | 24.53 (3.38) | 24.76 (3.41) | 0.5606 | 24.89 (3.56) | 67.17 (8.21) | 24.48 (3.06) | 0.919 | 0.6432 |
| HbA1c (%) | 7.38 (1.84) | 8.19 (1.89) | < 0.01 | 8.07 (1.78) | < 0.01 | 8.49 (2.14) | < 0.01 | 0.2363 |
| Glucose (mg/dL) | 148.20 (59.58) | 173.52 (77.41) | < 0.01 | 172.98 (71.65) | < 0.01 | 174.82 (90.61) | 0.05955 | 0.8999 |
| Creatinine (mg/dL) | 0.96 (0.18) | 1.21 (0.58) | < 0.01 | 1.10 (0.36) | < 0.01 | 1.49 (0.87) | < 0.01 | < 0.01 |
| T2D duration (years) | 7.1 (4.9) | 16.43 (11.1) | - | 14.9 (8.2) | - | 20 (15.48) | - | - |
* DR, diabetic retinopathy; NDR, non-diabetic retinopathy; NPDR, non-proliferative diabetic retinopathy; PDR, proliferative diabetic retinopathy; BMI, body mass index; T2D, type 2 diabetes.
Fig 2The levels of 16 DR-specific metabolites.
Dot- and box- plots represent the concentrations of the relevant metabolites in the serum of type 2 diabetes patients with non-diabetic retinopathy (NDR), non-proliferative DR (NPDR), and proliferative diabetic retinopathy (PDR). Graphs were plotted using the R package (Stats, version 3.6.2). The Y-axis indicates the metabolite concentration in micromoles (μM). P-values were determined via ANCOVA analysis. Fourteen metabolites (except PC ae C36.5 and PC ae 42.3) showed p-values lower than 0.001. Abbreviations: C:14:1, tetradecenoylcarnitine; C:16, hexadecanoylcarnitine; DMA, dimethylarginine; PC aa, phosphatidylcholine diacyl; PC ae, phosphatidylcholine acyl-alkyl; SM, sphingomyelin.
Identification of the common metabolites associated with both non-proliferative and proliferative diabetic retinopathy.
| Metabolites | Logistic regression | ANCOVA | ||
|---|---|---|---|---|
| Odds Ratio (95% CI) | Fold Change | |||
| Tetradecenoylcarnitine (C14:1) | 0.63 (0.48–0.82) | 4.32E-03 | 0.87 | 3.51E-04 |
| Hexadecanoylcarnitine (C16) | 0.59 (0.45–0.75) | 6.68E-04 | 0.86 | 1.95E-05 |
| Lysine (Lys) | 0.63 (0.49–0.81) | 2.90E-03 | 0.92 | 2.15E-04 |
| Methionine (Met) | 0.53 (0.4–0.69) | 1.69E-04 | 0.88 | 9.26E-07 |
| Tryptophan (Trp) | 0.36 (0.26–0.49) | 4.48E-08 | 0.81 | 1.79E-12 |
| Tyrosine (Tyr) | 0.43 (0.31–0.57) | 1.42E-06 | 0.84 | 4.84E-10 |
| Total Dimethyarginine (Total DMA) | 2.3 (1.59–3.47) | 4.28E-04 | 1.31 | 4.73E-05 |
| Phosphatidylcholine diacyl C32:2 (PC aa C32:2) | 0.47 (0.34–0.62) | 1.82E-05 | 0.75 | 4.79E-08 |
| Phosphatidylcholine diacyl C34:2 (PC aa C34:2) | 0.56 (0.42–0.73) | 6.68E-04 | 0.85 | 2.24E-05 |
| Phosphatidylcholine diacyl C36:2 (PC aa C36:2) | 0.56 (0.43–0.73) | 4.28E-04 | 0.85 | 1.10E-05 |
| Phosphatidylcholine diacyl C38:6 (PC aa C38:6) | 0.61 (0.47–0.78) | 1.49E-03 | 0.86 | 8.06E-05 |
| Phosphatidylcholine diacyl C40:6 (PC aa C40:6) | 0.6 (0.46–0.77) | 1.15E-03 | 0.86 | 5.91E-05 |
| Phosphatidylcholine acyl-alkyl C36:5 (PC ae C36:5) | 0.67 (0.51–0.86) | 1.03E-02 | 0.87 | 1.46E-03 |
| Phosphatidylcholine acyl-alkyl C42:3 (PC ae C42:3) | 0.69 (0.53–0.88) | 1.60E-02 | 0.9 | 2.30E-03 |
| Hydroxysphingomyeline C22:1 (SM (OH) C22:1) | 0.6 (0.46–0.77) | 1.22E-03 | 0.88 | 6.09E-05 |
| Sphingomyeline C24:0 (SM C24:0) | 0.57 (0.44–0.74) | 4.28E-04 | 0.88 | 7.84E-06 |