Literature DB >> 33118310

Adapting to the Coronavirus Pandemic: Building and Incorporating a Diagnostic Pipeline in a Shared Resource Laboratory.

Emma Russell1, Ana Agua-Doce1, Lotte Carr1, Asha Malla1, Kerol Bartolovic1, Dina Levi1, Carl Henderson1, Debipriya Das1, Hefin Rhys1, Philip Hobson1, Sukhveer Purewal1, Andrew Riddell1.   

Abstract

In March 2020, with lockdown due to the coronavirus pandemic underway, the Francis Crick Institute (the Crick) regeared its research laboratories into clinical testing facilities. Two pipelines were established, one for polymerase chain reaction and the other for Serology. This article discusses the Cricks Flow Cytometry Science Technology Platform (Flow STP) role in setting up the Serology pipeline. Pipeline here referring to the overarching processes in place to facilitate the receipt of human sera through to a SARs-CoV-2 enzyme-linked immunosorbent assay result. We examine the challenges that had to be overcome by a research laboratory to incorporate clinical diagnostics and the processes by which this was achieved. It describes the governance required to run the service, the design of the standard operating procedures (SOPs) and pipeline, the setting up of the assay, the validation required to show the robustness of the pipeline and reporting the results of the assay. Finally, as the lockdown started to ease in June 2020, it examines how this new service affects the daily running of the Flow STP.
© 2020 The Authors. Cytometry Part A published by Wiley Periodicals LLC on behalf of International Society for Advancement of Cytometry. © 2020 The Authors. Cytometry Part A published by Wiley Periodicals LLC on behalf of International Society for Advancement of Cytometry.

Entities:  

Keywords:  Assay; Covid-19; Cytometry; Development; ELISA; Flow; Pipeline; SARs-CoV-2; SRL; Validation; clinical; pandemic; testing

Mesh:

Year:  2020        PMID: 33118310      PMCID: PMC7894326          DOI: 10.1002/cyto.a.24248

Source DB:  PubMed          Journal:  Cytometry A        ISSN: 1552-4922            Impact factor:   4.714


  2 in total

1.  Scalable and robust SARS-CoV-2 testing in an academic center.

Authors:  Paul R Grant; Nnennaya Kanu; Jim Aitken; Karen Ambrose; Sam Barrell; Rupert Beale; Ganka Bineva-Todd; Dhruva Biswas; Richard Byrne; Simon Caidan; Peter Cherepanov; Laura Churchward; Graham Clark; Margaret Crawford; Laura Cubitt; Vicky Dearing; Christopher Earl; Amelia Edwards; Chris Ekin; Efthymios Fidanis; Alessandra Gaiba; Steve Gamblin; Sonia Gandhi; Jacki Goldman; Robert Goldstone; Maria Greco; Judith Heaney; Steve Hindmarsh; Catherine F Houlihan; Michael Howell; Michael Hubank; Deborah Hughes; Rachael Instrell; Deborah Jackson; Mariam Jamal-Hanjani; Ming Jiang; Mark Johnson; Leigh Jones; George Kassiotis; Stuart Kirk; Svend Kjaer; Andrew Levett; Lisa Levett; Marcel Levi; Wei-Ting Lu; James I MacRae; John Matthews; Laura E McCoy; Catherine Moore; David Moore; Eleni Nastouli; Jerome Nicod; Luke Nightingale; Jessica Olsen; Nicola O'Reilly; Amar Pabari; Venizelos Papayannopoulos; Namita Patel; Nigel Peat; Marc Pollitt; Peter Ratcliffe; Caetano Reis E Sousa; Annachiara Rosa; Rachel Rosenthal; Chloe Roustan; Andrew Rowan; Gee Yen Shin; Daniel M Snell; Ok-Ryul Song; Moira J Spyer; Amy Strange; Charles Swanton; James M A Turner; Melanie Turner; Andreas Wack; Philip A Walker; Sophia Ward; Wai Keong Wong; Joshua Wright; Mary Wu
Journal:  Nat Biotechnol       Date:  2020-08       Impact factor: 54.908

2.  Pandemic peak SARS-CoV-2 infection and seroconversion rates in London frontline health-care workers.

Authors:  Catherine F Houlihan; Nina Vora; Thomas Byrne; Dan Lewer; Gavin Kelly; Judith Heaney; Sonia Gandhi; Moira J Spyer; Rupert Beale; Peter Cherepanov; David Moore; Richard Gilson; Steve Gamblin; George Kassiotis; Laura E McCoy; Charles Swanton; Andrew Hayward; Eleni Nastouli
Journal:  Lancet       Date:  2020-07-09       Impact factor: 79.321

  2 in total

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