| Literature DB >> 33113222 |
Xiao-Hua Luo1, Yan Zhu2, Jian Mao1, Rui-Chan Du1.
Abstract
2019 coronavirus disease (COVID-19) presents as a newly recognized pneumonia and could rapidly progress into acute respiratory distress syndrome which has brought about a global pandemic. Until now, no curative therapy has been strongly recommended for COVID-19 except for personalized supportive care. T cells and virus-specific T cells are essential to protect against virus infection, including COVID-19. Delayed immune reconstitution (IR) and cytokine storm (CS) remain serious obstacles for the cure of COVID-19. Most COVID-19 patients, especially among elderly patients, had marked lymphopenia and increased neutrophils, but T cell counts in severe COVID-19 patients surviving the disease gradually restored later. Elevated pro-inflammatory cytokines, particularly IL-6, IL-10, IL-2 and IL-17, and exhausted T cells are found in peripheral blood and the lungs. It suggests that Thymosin α1 and adoptive COVID-19-specific T cells could improve IR, while convalescent plasma, IL-6 blockade, mesenchymal stem cells and corticosteroids could suppress CS. More clinical studies in this field worldwide are urgently warranted to pave the way for therapy of COVID-19 in the future.Entities:
Keywords: COVID-19; T cell; coronavirus disease 2019; cytokine storm; immune reconstitution
Mesh:
Substances:
Year: 2020 PMID: 33113222 PMCID: PMC7645942 DOI: 10.1111/sji.12989
Source DB: PubMed Journal: Scand J Immunol ISSN: 0300-9475 Impact factor: 3.889
T cell immunobiology and cytokine storm reported tin COVID‐19 patients
| Cohort | Sample | Methods used | T cell immunobiology | Cytokine storm | References |
|---|---|---|---|---|---|
| 452 patients with 286 having severe infection | PBMCs, serum or plasma samples | Flow cytometry | T cells number significantly decreased and were more impaired in severe cases. Both Th cells and suppressor T cells in patients were below normal levels, with lower levels of Th cells in the severe group. The percentage of naive Th cells increased and memory Th cells decreased in severe cases. | Most severe cases demonstrated elevated levels of infection‐related biomarkers and inflammatory cytokines. (ie TNF‐α, IL‐2R and IL‐6) |
|
| 11 severe cases and 10 moderate cases | PBMCs, serum or plasma samples | Flow cytometry and chemiluminescence immunoassay | Absolute numbers of T lymphocytes, CD4+ T cells and CD8+ T cells decreased in nearly all the patients and were markedly lower in severe cases than moderate cases. | Markedly higher levels of IL‐2R, IL‐6, IL‐10 and TNF‐α. |
|
| 60 patients | PBMCs | Flow cytometry | CD4+ T cells and CD8+ T cells decreased in patients, and severe cases had a lower level than mild cases. | NR |
|
| 522 patients and 40 healthy controls | PBMCs, serum or plasma samples | Flow cytometry | CD4+ and CD8+ T cells were dramatically reduced in patients. T cells from patients had significantly higher levels of the exhausted marker PD‐1. | T cell numbers were negatively correlated to serum IL‐6, IL‐10 and TNF‐α concentration, with patients in the disease resolution period showing reduced IL‐6, IL‐10 and TNF‐α concentrations and restored T cell counts. |
|
| 65 patients having mild (n = 30), severe (n = 20) and extremely severe (n = 15) illness | PBMCs, serum or plasma samples | Flow cytometry and chemiluminescence immunoassay | The absolute numbers of CD4+ T cells and CD8+ T cells were gradually decreased with increased severity of illness. HLA‐DR and CD45RO expressed on CD4+ and CD8+ T cells were increased in severe and extremely severe patients. The percentage of IFN‐γ‐producing CD8+ T cells was increased in both severe and extremely severe patients compared with mild patients. | IL‐2R, IL‐6 and IL‐10 were all increased in extremely severe patients. |
|
| patients in ICU(n = 12) and Non‐ICU(n = 21), and healthy controls (n= 10) | PBMCs | Flow cytometry | The CD4+ T cells from both ICU and non‐ICU patients had decreased remarkably, whereas CD8+ T cells decreased more significantly in ICU patients. CD4+ and CD8+ T cells in patients have higher expression of CD69, CD38 and CD44. A much higher percentage of co‐expression Tim3+ PD‐1+ T subsets existed in both CD4+ and CD8+ T cells from patients, especially in ICU patients. A high percentage of GM‐CSF+ and IL‐6+ expressions could be found in CD4+ T cells from patients in both ICU and non‐ICU patients compared to healthy controls | NR |
|
| 55 cases of mild disease (MD) and 13 cases of severe disease (SD). | PBMCs | Flow cytometry | The number of T cells and CD8+ T cells was significantly lower in SD patients than that in MD cases. In patients infected with SARS‐CoV‐2, NKG2A expression was increased significantly on CD8+ T cells compared with that in HCs. Patients showed decreased percentages of CD107a+ CD8+, IFN‐γ+ CD8+ and IL‐2+ CD8+ T cells and MFI of granzyme B+ CD8+ T cells, compared with those in healthy controls | NR |
|
| 13 severe cases and 27 mild cases | PBMCs, serum or plasma samples | Flow cytometry and cytokine profiles | Significant decreases in the counts of T cells, especially CD8+ T cells in the peripheral blood in the severe cases compared to those in the mild cases. T cell counts and cytokine levels in severe patients who survived the disease gradually recovered at later time points to levels that were comparable to those of the mild cases. | Increases in IL‐6, IL‐10, IL‐2 and IFN‐γ levels in the peripheral blood in the severe cases compared to those in the mild cases. |
|
| 86 were patients with mild‐to‐moderate illness and 17 were patients with severe illness | PBMCs | Flow cytometry | CD3+ T cells, CD4+ T cells and CD8+ T cells were significantly decreased in patients with COVID‐19. These patients had a relatively slight decrease in CD4+ T cells but a severe decrease in CD8+ T cells. The significantly elevated CD4/CD8 ratio was observed in patients. | NR |
|
| 19 patients with moderate or critical disease and five healthy controls | nasopharyngeal and bronchial samples | single‐cell RNA sequencing | NR | Critical cases exhibited stronger interactions between epithelial and immune cells, as indicated by ligand‐receptor expression profiles and activated immune cells, including inflammatory macrophages expressing CCL2, CCL3, CCL20, CXCL1, CXCL3, CXCL10, IL8, IL1B and TNF. | |
| A non‐severe case | PBMCs, serum or plasma samples | Flow cytometry and the Human CBA Kit |
The recruitment of immune cell populations (follicular helper T cells (TFH cells) and activated CD4+ and CD8+ T cells) in the patient's blood before the resolution of symptoms. | Minimal pro‐inflammatory cytokines and chemokines were found in this patient with COVID‐19, even while she was symptomatic at days 7‐9. |
|
| 14 patients who recently recovered | PBMCs | Flow cytometry and ELISPOT | A strong correlation between neutralization antibody titres and the numbers of virus‐specific T cells. | NR |
|
| Unexposed individuals, exposed family members and individuals with acute or convalescent disease | PBMCs | High‐dimensional flow cytometry and ELISPOT | Acute‐phase SARS‐CoV‐2‐specific T cells displayed a highly activated cytotoxic phenotype that correlated with various clinical markers of disease severity, whereas convalescent‐phase SARS‐CoV‐2‐specific T cells were polyfunctional and displayed a stem‐like memory phenotype. SARS‐CoV‐2‐specific T cells were detectable in antibody‐seronegative exposed family members and convalescent individuals with a history of asymptomatic and mild COVID‐19. | NR` |
|
| 20 adult patients who had recovered and 20 unexposed individuals | PBMCs | Flow cytometry and the Human CBA Kit | Circulating SARS‐CoV‐2‐specific CD8+ and CD4+ T cells were identified in ~ 70% and 100% of COVID‐19 convalescent patients, respectively. SARS‐CoV‐2‐reactive CD4+ T cells were detected in ~ 40%–60% of unexposed individuals. | NR |
|
| 10 patients who required admission to an intensive care unit and 10 healthy controls | PBMCs | Flow cytometry | SARS‐CoV‐2‐specific CD4+ and CD8+ T cells were detected in 10 out of 10 and 8 out of 10 patients, respectively. Low levels of SARS‐CoV‐2‐reactive T cells were detected in 2 out of 10 healthy controls not previously exposed to SARS‐CoV‐2. The strongest T cell responses were directed to the spike surface glycoprotein and SARS‐CoV‐2‐specific T cells predominantly produced effector and Th1 cytokines. | NR |
|
| 42 patients following recovery (28 with mild disease and 14 with severe disease) and 16 unexposed donors | PBMCs | Flow cytometry and ELISPOT | The breadth and magnitude of T cell responses were significantly higher in severe as compared with mild cases. Peptide‐MHC pentamer‐positive cells displaying the central and effector memory phenotype. In mild cases, higher proportions of SARS‐CoV‐2‐specific CD8+ T cells were observed. | NR |
|
| patients who recovered (n = 36) and patients who recovered from SARS (n = 23) 17 years after infection, healthy donors (n = 26) | PBMCs | Flow cytometry and ELISPOT | CD4 and CD8 T cells recognized multiple regions of the N protein. Patients who recovered from SARS possess long‐lasting memory T cells that are reactive to the N protein of SARS‐CoV 17 years after the outbreak of SARS in 2003; these T cells displayed robust cross‐reactivity to the N protein of SARS‐CoV‐2. SARS‐CoV‐2‐specific T cells were also detected in individuals with no history of SARS | NR |
|
| 18 healthy adult donors | PBMCs | Flow cytometry and FluoroSPOT | A range of pre‐existing memory CD4+ T cells that are cross‐reactive with comparable affinity to SARS‐CoV‐2 and the common cold coronaviruses human coronavirus (HCoV)‐OC43, HCoV‐229E, HCoV‐NL63 and HCoV‐HKU1. | NR |
|
| 68 healthy donors and 25 patients | PBMCs | Flow cytometry | Spike‐reactive CD4+ T cells were detected not only in 83% of patients with COVID‐19 but also in 35% of healthy donors. Spike‐reactive CD4+ T cells in healthy donors were primarily active against C‐terminal epitopes in the spike protein. | NR |
|
| 125 patients | PBMCs, serum or plasma samples | High‐dimensional flow cytometry and Luminex | Two major immune response components and a third pattern lacking robust adaptive immune responses, thus revealing immunotypes of COVID‐19: (a) Immunotype 1 was associated with disease severity and showed robust activated CD4 T cells, a paucity of circulating follicular helper cells, activated CD8 ‘EMRAs’, hyperactivated or exhausted CD8 T cells and PBs. (b) Immunotype 2 was characterized by less CD4 T cell activation, Tbet+ effector CD4 and CD8 T cells and proliferating memory B cells and was not associated with disease severity. (c) Immunotype 3, which negatively correlated with disease severity and lacked obvious activated T and B cell responses | Elevated systemic cytokines and chemokines, including myeloid‐recruiting chemokines. |
|
| 7 patients had moderate disease and 28 with severe disease, 7 recovered patients and 12 healthy donors | PBMCs | Flow cytometry | Extensive induction and activation of multiple immune lineages, including T cell activation and Fc and trafficking receptor modulation on innate lymphocytes and granulocytes, that distinguished severe COVID‐19 cases from healthy donors or SARS‐CoV‐2‐recovered or moderate severity patients. | NR |
|
| A patient who died from severe disease | PBMCs, post‐mortem biopsies. | Flow cytometry andhistological examination | The counts of peripheral CD4 and CD8 T cells were substantially reduced, while their status was hyperactivated, as evidenced by the high proportions of HLA‐DR and CD38 double‐positive fractions. There was an increased concentration of highly pro‐inflammatory CCR6+ Th17 in CD4 T cells. CD8 T cells were found to harbour high concentrations of cytotoxic granules. Interstitial mononuclear inflammatory infiltrates, dominated by lymphocytes, were seen in both lungs. | NR |
|
| 13 patients | Bronchoalveolar lavage fluid immune cells | Single‐cell RNA sequencing and cytometric bead array | Moderate cases were characterized by the presence of highly clonally expanded CD8+ T cells. | Pro‐inflammatory monocyte‐derived macrophages were abundant in the bronchoalveolar lavage fluid from patients with severe COVID‐9. Patients with severe/critical infection had much higher levels of inflammatory cytokines, particularly IL‐8, IL‐6 and IL‐1β, in their BALFs |
|
| 2 patients | COVID‐19 human lung tissue, human patient sera, healthy human lung tissue | RNA‐Seq and Cytokine and Chemokine Protein Analysis | NR | Low levels of type I and III interferons juxtaposed to elevated chemokines and high expression of IL‐6. |
|
| 76 patients and 69 healthy individuals | PBMCs | Mass cytometry and CITE‐seq single‐cell RNA sequencing | There was a notable increase in the frequency of effector CD8 T cells in all infected individuals. The kinetics of the CD8 effector T cell response were prolonged and continued to increase up to day 40 after onset of the symptoms | 43 cytokines, including IL‐6, MCP‐3 and CXCL10, were significantly upregulated. Enhanced plasma levels of inflammatory mediators—including EN‐RAGE, TNFSF14 and oncostatin M—which correlated with disease severity and increased bacterial products were detected in plasma. |
|
| 41 patients | Plasma samples | Human Cytokine Standard 27‐Plex Assays panel and the Bio‐Plex 200 system | NR | ICU patients had higher plasma levels of IL2, IL7, IL10, GSCF, IP10, MCP1, MIP1A and TNF‐α. |
|
| 102 mild and 21 severe patients | PBMCs, plasma samples | Flow cytometry, cytokine and chemokine measurements | There were significant differences in CD4+ T, CD8+ T, IL‐6 and IL‐10 between mild and severe groups. There were significant positive correlations between CD4+ T and CD8+ T, IL‐6 and IL‐10 in the mild group. | CD4+ T, CD8+ T, IL‐6 and IL‐10 can be used as indicators of disease evolution. |
|
| 113 patients with moderate or severe disease | PBMCs, plasma samples | Flow cytometry and multiple microsphere flow immunofluorescence | Patients with COVID‐19 presented with marked reductions in the number and frequency of both CD4+ and CD8+ T cells. | An early elevation in cytokine levels was associated with worse disease outcomes. Following an early increase in cytokines, patients with moderate COVID‐19 displayed a progressive reduction in type 1 (antiviral) and type 3 (antifungal) responses. Severe COVID‐19 was accompanied by an increase in multiple type 2 (antihelminths) effectors, including IL‐5, IL‐13, immunoglobulin E and eosinophils. |
|
| 63 patients | PBMCs, serum or plasma samples | Flow cytometry and cytokine analysis | Highly cycling T cells and CD8+ T cells co‐expressed exhaustion‐associated markers, PD‐1 and TIM3. αβ and γδ T cells were depleted and the composition of the B cell compartment was altered. T lymphopenia most overtly affected CD8+ cells and γδ cells | A third set of traits, including a triad of IP‐10, interleukin‐10 and interleukin‐6, anticipate subsequent clinical progression. |
|
| 37 adult patients | PBMCs, serum or plasma samples | Mass Cytometry and Plasma protein profiling | The recovery of T cells after the initial lymphopenia occurs over the following 2‐3 weeks and is dominated by CD127‐expressing effector and central memory CD4+ T cells, as well as CD57‐expressing and differentiated memory CD8+ T cells. The CD4+ T cell response was initially dominated by effector and central memory responses, followed by an increase in regulatory Tregs ~ 4 days after admission. The CD8+ T cell responses are dominated by activated cells expressing high CD38 and also a subset of effector cells upregulating the CD147 receptor from ~ 1 week onward | An IFNγ‐eosinophil axis activated before lung hyperinflammation and changes in cell‐cell co‐regulation during different stages of the disease. |
|
| 48 patients | PBMCs, plasma samples | Flow cytometry and ELISA | The occurrence of lymphopenia in COVID‐19 patients, mainly affected CD3+ T cells. | Higher levels of inflammatory cytokines were observed in COVID‐19 patients than in healthy donors. Both IL‐6 and IL‐8 were negatively correlated with perforin content in both innate (NK) and adaptive (CD3) immune cells. |
|
| 3 COVID‐19 patients and 10 healthy volunteers | Whole blood | Daily transcriptomic profiling | The CD4, CD8A and CD8B mRNA transcript levels were the lowest among all the subjects. | The pro‐inflammatory response may be intertwined with T cell activation that could exacerbate disease or prolong the infection. Most inflammatory gene expression peaked after respiratory function nadir, except expression in the IL1 pathway. |
|
| 10 patients and 5 healthy donors | PBMCs | Single‐cell RNA sequencing technique | CD4+ T cells and CD8+ T cells decreased significantly and expressed high levels of inflammatory genes in the early recovery stage. | IL‐1β and M‐CSF may be novel candidate target genes for inflammatory storm and that TNFSF13, IL‐18, IL‐2 and IL‐4 may be beneficial for the recovery of COVID‐19 patients. |
|
| 10 patients who died from disease | Post‐mortem needle autopsies | Immunohistochemistry | The cell composition of the spleen decreased, white pulp atrophied at different levels, meanwhile lymphoid follicles decreased or absent; the ratio of red pulp to white pulp increased with varying degrees. the T and B lymphocyte components of the spleen in all cases decreased in varying degrees. CD3(+), CD4(+) and CD8(+)T cells were decreased. | NR |
|
| 13 convalescent patients and13 healthy individuals | PBMCs, plasma samples | Flow cytometry, magnetic chemiluminescence enzyme antibody immunoassay, and measurement of cytokine and chemokine | More severe individuals showed higher frequency of TEM and TFH‐EM cells but a lower frequency of TCM, TFH‐CM and TNaive cells, relative to mild and moderate patients. cTFH1 cell associated with SARS‐CoV‐2 targeting antibodies. | Around 4‐fold higher of IL‐6 production was observed in COVID‐19 convalescent patients. Higher level of IL‐1β while comparable IFN‐γ has been noticed in convalescents. Around 46% of COVID‐19 convalescents displayed higher TNF‐α and exhibited higher plasma level of CXCL11 , |
|
GM‐CSF, granulocyte‐macrophage colony‐stimulating factor; ICU, intensive care unit; NR, not reported; PBMC, peripheral blood mononuclear cell; PD1, programmed cell death protein 1; TFH cell, T follicular helper cell; TH1 cell, T helper 1 cell; TIM3, T cell immunoglobulin and mucin domain‐containing protein 3.
FIGURE 1T cell immune reconstitution and kinetics of cytokines in one patient who progresses to severe COVID‐19 during a typical course, and proposed ways to control these aberrant immune responses