| Literature DB >> 33099318 |
Feng Huang1, Yuanfei Peng2, Qing Ye3, Jinhu Chen1, Yangming Li1, Shengyuan Liu1, Yangmei Xu1, Lijie Huang1.
Abstract
BACKGROUND: Genetic alterations play an important role in the progression of colorectal cancer (CRC). Identifying new biomarkers to assess the prognosis of patients with CRC is critical. Cartilage intermediate layer protein 2 (CILP2) gene, screened from TCGA database by bioinformatics, may be closely related to the progression of CRC. CILP2 was barely reported with clinical features of tumors.Entities:
Keywords: CILP2; Colorectal cancer; Immunohistochemistry; Prognosis; TCGA
Mesh:
Substances:
Year: 2020 PMID: 33099318 PMCID: PMC7585680 DOI: 10.1186/s12957-020-02049-6
Source DB: PubMed Journal: World J Surg Oncol ISSN: 1477-7819 Impact factor: 2.754
Fig. 1CILP2 was upregulated in colorectal cancer samples. a, b The line chart and histogram of CILP2 gene expression in 50 paired tumor and matched adjacent normal tissue samples in TCGA cohort. FC, fold change. c Scatter plot of CILP2 expression in all normal and cancer samples in TCGA cohort. ***P < 0.001. d Positive or negative expression of CILP2 protein in matched adjacent normal tissues (normal) or cancer tissues in the TMA cohort. **P = 0.001. e Representative image of normal tissue immunohistochemical staining in the TMA cohort. Left: original magnification × 100; right: original magnification × 400. f Representative image of cancer tissue immunohistochemical staining in the TMA cohort. Left: original magnification × 100; right: original magnification × 400
CILP2 gene expression in 50 paired tumor and matched adjacent normal tissue samples, and in all normal and cancer samples in TCGA cohort
| ID | Gene symbol | FC | Total sample | Sample unchanged | Sample up | Sample down | ||
|---|---|---|---|---|---|---|---|---|
| 148113 | CILP2 | 3.412 | 2.56E−07 | 50 | 15 | 31 | 4 | |
| 148113 | CILP2 | 8.6161 | 1.28E−19 | 621 | – | – | – |
Association between CILP2 expression level and clinicopathological parameters in CRC patients
| Clinicopathological parameters | Expression of CILP2 mRNA in TGCA | Expression of CILP2 protein in TMA cohort | ||||
|---|---|---|---|---|---|---|
| High ( | Low ( | High ( | Low ( | |||
| Age (years) | 0.059 | 0.37 | ||||
| ≤ 68 ( | 177 (53.47%) | 154 (46.53%) | 20 (66.67%) | 10 (33.33%) | ||
| > 68 ( | 133 (45.86%) | 157 (54.14%) | 19 (55.88%) | 15 (44.12%) | ||
| Gender | 0.400 | 0.8 | ||||
| Male ( | 160 (48.34%) | 171 (51.66%) | 22 (62.86%) | 13 (37.14%) | ||
| Female ( | 150 (51.72%) | 140 (48.28%) | 17 (58.62%) | 12 (41.38%) | ||
| Pathological T stagea | ||||||
| T1/2 ( | 46 (36.51%) | 80 (63.49%) | 13 (44.83%) | 16 (55.17%) | ||
| T3/4 ( | 263 (53.35%) | 230 (46.65%) | 26 (74.29%) | 9 (25.71%) | ||
| N stagea | 0.2 | |||||
| N0 ( | 158 (44.89%) | 194 (55.11%) | 16 (51.61%) | 15 (48.39%) | ||
| N1/2/3 ( | 149 (56.23%) | 116 (43.77%) | 23 (69.70%) | 10 (30.30%) | ||
| M stagea | 0.074 | |||||
| M0 ( | 223 (48.69%) | 235 (51.31%) | 30 (55.56%) | 24 (44.44%) | ||
| M1 ( | 53 (60.23%) | 35 (39.77%) | 9 (90.00%) | 1 (10.00%) | ||
| Clinical stagea | ||||||
| Stage I ( | 36 (34.29%) | 69 (65.71%) | 5 (35.71%) | 9 (64.29%) | ||
| Stage II ( | 113 (49.35%) | 116 (50.65%) | 8 (50.00%) | 8 (50.00%) | ||
| Stage III ( | 97 (54.19%) | 82 (45.81%) | 17 (70.83%) | 7 (29.17%) | ||
| Stage IV ( | 54 (60.00%) | 36 (40.00%) | 9 (90.00%) | 1 (10.00%) | ||
P value < 0.05 was considered statistically significant (in bold). T tumor, N regional lymph node, M metastasis
aSome missing data for parameter
Correlation between CILP2 expression and TNM stages in CRC patients in TCGA cohort
| CILP2 expression | T stage | N stage | M stage | Clinical stage | ||
|---|---|---|---|---|---|---|
| CILP2 expression | 1.000 | 0.136 | 0.112 | 0.085 | 0.149 | |
| N.A | ||||||
| T stage | 0.136 | 1.000 | 0.308 | 0.197 | 0.589 | |
| N.A | ||||||
| N stage | 0.112 | 0.308 | 1.000 | 0.418 | 0.846 | |
| N.A | ||||||
| M stage | 0.085 | 0.197 | 0.418 | 1.000 | 0.665 | |
| N.A | ||||||
| Clinical stage | 0.149 | 0.589 | 0.846 | 0.665 | 1.000 | |
| N.A |
P value < 0.05 was considered statistically significant (in bold). T tumor, N regional lymph node, M metastasis
Fig. 2CILP2 expression was correlated with different clinicopathological parameters of CRC patients in TCGA cohort, as in a T stages, b regional lymph node metastatic patients, c distant metastatic patients, and d UICC clinical stages. *P < 0.05; **P < 0.01; ***P < 0.001
Fig. 3The Kaplan-Meier analysis of CILP2 expression and overall survival in total CRC samples of 10 years in TCGA cohort. Higher CILP2 expression group had a poorer overall survival than the low CILP2 expression group (P = 0.003)
Survival analysis was performed by the Kaplan-Meier method
| Variables | Means for survival time (month) | Survival time (month, 95% CI) | ||||
|---|---|---|---|---|---|---|
| CILP2 expression | Low | 304 | 83.770 | 74.181 | 93.359 | |
| High | 305 | 70.805 | 61.802 | 79.807 | ||
| Total | 609 | 77.193 | 70.583 | 83.803 | ||
| Gender | Male | 329 | 74.017 | 64.871 | 83.163 | 0.941 |
| Female | 280 | 80.242 | 70.918 | 89.566 | ||
| Total | 609 | 77.193 | 70.583 | 83.803 | ||
| Age | ≤ 68 | 324 | 86.777 | 77.219 | 96.334 | |
| > 68 | 285 | 68.173 | 59.326 | 77.021 | ||
| Total | 609 | 77.193 | 70.583 | 83.803 | ||
| T stage | T1/2 | 126 | 97.409 | 81.150 | 113.667 | |
| T3/4 | 481 | 74.489 | 67.519 | 81.460 | ||
| Total | 607 | 77.572 | 70.950 | 84.194 | ||
| N stage | N0 | 348 | 88.348 | 79.810 | 96.887 | |
| N1/2/3 | 257 | 63.017 | 53.234 | 72.799 | ||
| Total | 605 | 77.530 | 70.908 | 84.152 | ||
| M stage | M0 | 450 | 87.130 | 79.689 | 94.571 | |
| M1 | 86 | 37.131 | 29.468 | 44.794 | ||
| Total | 536 | 78.778 | 71.809 | 85.747 | ||
| Clinical stage | Stage I/II | 330 | 89.089 | 80.335 | 97.843 | |
| Stage III/IV | 262 | 64.632 | 54.851 | 74.413 | ||
| Total | 592 | 78.325 | 71.646 | 85.005 | ||
P value < 0.05 was considered statistically significant (in bold). T tumor, N regional lymph node, M metastasis
Survival analysis was performed by univariate and multivariate Cox regression analysis
| Variables | Univariate analysis | Multivariate analysis | ||||
|---|---|---|---|---|---|---|
| HR | 95% CI | HR | 95% CI | |||
| CILP2 expression (high vs. low) | 0.003 | 1.713 | 1.194–2.457 | 1.547 | 1.033–2.317 | |
| Gender (male vs. female) | 0.941 | 0.987 | 0.694–1.404 | 0.132 | 1.351 | 0.913–1.999 |
| Age (> 68 vs. ≤ 68) | 1.923 | 1.337–2.767 | 2.626 | 1.743–3.957 | ||
| T stage (T3/4 vs. T1/2) | 2.457 | 1.320–4.572 | 0.143 | 1.817 | 0.816–4.044 | |
| N stage (N1/2/3 vs. N0) | 2.734 | 1.897–3.942 | 0.264 | 0.589 | 0.232–1.491 | |
| M stage (M1 vs. M0) | 4.126 | 2.776–6.133 | 2.854 | 1.769–4.604 | ||
| Clinical stage (III/IV vs. I/II) | 3. | 2.046–4.401 | 3.408 | 1.244–9.337 | ||
P value < 0.05 was considered statistically significant (in bold). T tumor, N regional lymph node, M metastasis, HR hazard ratio, CI confidence interval