Literature DB >> 11835502

The leghemoglobin proximal heme pocket directs oxygen dissociation and stabilizes bound heme.

Suman Kundu1, Barry Snyder, Kaustuv Das, Pramit Chowdhury, Jaehun Park, Jacob W Petrich, Mark S Hargrove.   

Abstract

Sperm whale myoglobin (Mb) and soybean leghemoglobin (Lba) are two small, monomeric hemoglobins that share a common globin fold but differ widely in many other aspects. Lba has a much higher affinity for most ligands, and the two proteins use different distal and proximal heme pocket regulatory mechanisms to control ligand binding. Removal of the constraint provided by covalent attachment of the proximal histidine to the F-helices of these proteins decreases oxygen affinity in Lba and increases oxygen affinity in Mb, mainly because of changes in oxygen dissociation rate constants. Hence, Mb and Lba use covalent constraints in opposite ways to regulate ligand binding. Swapping the F-helices of the two proteins brings about similar effects, highlighting the importance of this helix in proximal heme pocket regulation of ligand binding. The F7 residue in Mb is capable of weaving a hydrogen-bonding network that holds the proximal histidine in a fixed orientation. On the contrary, the F7 residue in Lba lacks this property and allows the proximal histidine to assume a conformation favorable for higher ligand binding affinity. Geminate recombination studies indicate that heme iron reactivity on picosecond timescales is not the dominant cause for the effects observed in each mutation. Results also indicate that in Lba the proximal and distal pocket mutations probably influence ligand binding independently. These results are discussed in the context of current hypotheses for proximal heme pocket structure and function. Copyright 2002 Wiley-Liss, Inc.

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Year:  2002        PMID: 11835502     DOI: 10.1002/prot.10048

Source DB:  PubMed          Journal:  Proteins        ISSN: 0887-3585


  6 in total

1.  Direct measurement of equilibrium constants for high-affinity hemoglobins.

Authors:  Suman Kundu; Scott A Premer; Julie A Hoy; James T Trent; Mark S Hargrove
Journal:  Biophys J       Date:  2003-06       Impact factor: 4.033

2.  Significantly enhanced heme retention ability of myoglobin engineered to mimic the third covalent linkage by nonaxial histidine to heme (vinyl) in synechocystis hemoglobin.

Authors:  Sheetal Uppal; Shikha Salhotra; Nitika Mukhi; Fatima Kamal Zaidi; Manas Seal; Somdatta Ghosh Dey; Rajiv Bhat; Suman Kundu
Journal:  J Biol Chem       Date:  2014-12-01       Impact factor: 5.157

3.  Proximal influences in two-on-two globins: effect of the Ala69Ser replacement on Synechocystis sp. PCC 6803 hemoglobin.

Authors:  Jane A Knappenberger; Syna A Kuriakose; B Christie Vu; Henry J Nothnagel; David A Vuletich; Juliette T J Lecomte
Journal:  Biochemistry       Date:  2006-09-26       Impact factor: 3.162

Review 4.  How do heme-protein sensors exclude oxygen? Lessons learned from cytochrome c', Nostoc puntiforme heme nitric oxide/oxygen-binding domain, and soluble guanylyl cyclase.

Authors:  Ah-Lim Tsai; Emil Martin; Vladimir Berka; John S Olson
Journal:  Antioxid Redox Signal       Date:  2012-04-10       Impact factor: 8.401

Review 5.  A new paradigm for gaseous ligand selectivity of hemoproteins highlighted by soluble guanylate cyclase.

Authors:  Gang Wu; Emil Martin; Vladimir Berka; Wen Liu; Elsa D Garcin; Ah-Lim Tsai
Journal:  J Inorg Biochem       Date:  2020-10-16       Impact factor: 4.155

6.  CO binding and ligand discrimination in human myeloperoxidase.

Authors:  Emma J Murphy; Amandine Maréchal; Anthony W Segal; Peter R Rich
Journal:  Biochemistry       Date:  2010-03-16       Impact factor: 3.162

  6 in total

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