Literature DB >> 33077592

Liquid-liquid phase separation promotes animal desiccation tolerance.

Clinton Belott1, Brett Janis1, Michael A Menze2.   

Abstract

Proteinaceous liquid-liquid phase separation (LLPS) occurs when a polypeptide coalesces into a dense phase to form a liquid droplet (i.e., condensate) in aqueous solution. In vivo, functional protein-based condensates are often referred to as membraneless organelles (MLOs), which have roles in cellular processes ranging from stress responses to regulation of gene expression. Late embryogenesis abundant (LEA) proteins containing seed maturation protein domains (SMP; PF04927) have been linked to storage tolerance of orthodox seeds. The mechanism by which anhydrobiotic longevity is improved is unknown. Interestingly, the brine shrimp Artemia franciscana is the only animal known to express such a protein (AfrLEA6) in its anhydrobiotic embryos. Ectopic expression of AfrLEA6 (AWM11684) in insect cells improves their desiccation tolerance and a fraction of the protein is sequestered into MLOs, while aqueous AfrLEA6 raises the viscosity of the cytoplasm. LLPS of AfrLEA6 is driven by the SMP domain, while the size of formed MLOs is regulated by a domain predicted to engage in protein binding. AfrLEA6 condensates formed in vitro selectively incorporate target proteins based on their surface charge, while cytoplasmic MLOs formed in AfrLEA6-transfected insect cells behave like stress granules. We suggest that AfrLEA6 promotes desiccation tolerance by engaging in two distinct molecular mechanisms: by raising cytoplasmic viscosity at even modest levels of water loss to promote cell integrity during drying and by forming condensates that may act as protective compartments for desiccation-sensitive proteins. Identifying and understanding the molecular mechanisms that govern anhydrobiosis will lead to significant advancements in preserving biological samples.

Entities:  

Keywords:  cryptobiosis; late embryogenesis abundant; liquid-liquid phase separation; membraneless organelle; water stress

Mesh:

Substances:

Year:  2020        PMID: 33077592      PMCID: PMC7959570          DOI: 10.1073/pnas.2014463117

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  75 in total

1.  Temporal profiling of the heat-stable proteome during late maturation of Medicago truncatula seeds identifies a restricted subset of late embryogenesis abundant proteins associated with longevity.

Authors:  Emilie Chatelain; Michaela Hundertmark; Olivier Leprince; Sophie Le Gall; Pascale Satour; Stéphanie Deligny-Penninck; Hélène Rogniaux; Julia Buitink
Journal:  Plant Cell Environ       Date:  2012-03-27       Impact factor: 7.228

2.  Spectrally resolved fluorescence lifetime imaging of Nile red for measurements of intracellular polarity.

Authors:  James A Levitt; Pei-Hua Chung; Klaus Suhling
Journal:  J Biomed Opt       Date:  2015-09       Impact factor: 3.170

3.  The I-TASSER Suite: protein structure and function prediction.

Authors:  Jianyi Yang; Renxiang Yan; Ambrish Roy; Dong Xu; Jonathan Poisson; Yang Zhang
Journal:  Nat Methods       Date:  2015-01       Impact factor: 28.547

4.  Structural properties and cellular expression of AfrLEA6, a group 6 late embryogenesis abundant protein from embryos of Artemia franciscana.

Authors:  Blase M LeBlanc; Mike T Le; Brett Janis; Michael A Menze; Steven C Hand
Journal:  Cell Stress Chaperones       Date:  2019-07-30       Impact factor: 3.667

Review 5.  Late seed maturation: drying without dying.

Authors:  Olivier Leprince; Anthoni Pellizzaro; Souha Berriri; Julia Buitink
Journal:  J Exp Bot       Date:  2017-02-01       Impact factor: 6.992

Review 6.  Role of Intrinsic Disorder in Animal Desiccation Tolerance.

Authors:  Brett Janis; Clinton Belott; Michael A Menze
Journal:  Proteomics       Date:  2018-09-20       Impact factor: 3.984

Review 7.  Intrinsically disordered proteins and intrinsically disordered protein regions.

Authors:  Christopher J Oldfield; A Keith Dunker
Journal:  Annu Rev Biochem       Date:  2014-03-05       Impact factor: 23.643

8.  A spin-drying technique for lyopreservation of mammalian cells.

Authors:  Nilay Chakraborty; Anthony Chang; Heidi Elmoazzen; Michael A Menze; Steven C Hand; Mehmet Toner
Journal:  Ann Biomed Eng       Date:  2011-02-04       Impact factor: 3.934

9.  20 years of the SMART protein domain annotation resource.

Authors:  Ivica Letunic; Peer Bork
Journal:  Nucleic Acids Res       Date:  2018-01-04       Impact factor: 16.971

Review 10.  Phase transitions and size scaling of membrane-less organelles.

Authors:  Clifford P Brangwynne
Journal:  J Cell Biol       Date:  2013-12-23       Impact factor: 10.539

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  13 in total

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Journal:  J Assist Reprod Genet       Date:  2022-01-04       Impact factor: 3.412

2.  Protection by desiccation-tolerance proteins probed at the residue level.

Authors:  Candice J Crilly; Julia A Brom; Owen Warmuth; Harrison J Esterly; Gary J Pielak
Journal:  Protein Sci       Date:  2021-11-24       Impact factor: 6.725

Review 3.  Deciphering the Biological Enigma-Genomic Evolution Underlying Anhydrobiosis in the Phylum Tardigrada and the Chironomid Polypedilum vanderplanki.

Authors:  Yuki Yoshida; Sae Tanaka
Journal:  Insects       Date:  2022-06-19       Impact factor: 3.139

Review 4.  Get closer and make hotspots: liquid-liquid phase separation in plants.

Authors:  Jiwoo Kim; Hongwoo Lee; Hong Gil Lee; Pil Joon Seo
Journal:  EMBO Rep       Date:  2021-04-28       Impact factor: 8.807

5.  What is dry? Exploring metabolism and molecular mobility at extremely low water contents.

Authors:  Jill M Farrant; Henk W M Hilhorst
Journal:  J Exp Bot       Date:  2021-02-27       Impact factor: 6.992

Review 6.  Liquid Biomolecular Condensates and Viral Lifecycles: Review and Perspectives.

Authors:  Temitope Akhigbe Etibor; Yohei Yamauchi; Maria João Amorim
Journal:  Viruses       Date:  2021-02-25       Impact factor: 5.048

7.  Desiccation-induced fibrous condensation of CAHS protein from an anhydrobiotic tardigrade.

Authors:  Maho Yagi-Utsumi; Kazuhiro Aoki; Hiroki Watanabe; Chihong Song; Seiji Nishimura; Tadashi Satoh; Saeko Yanaka; Christian Ganser; Sae Tanaka; Vincent Schnapka; Ean Wai Goh; Yuji Furutani; Kazuyoshi Murata; Takayuki Uchihashi; Kazuharu Arakawa; Koichi Kato
Journal:  Sci Rep       Date:  2021-11-04       Impact factor: 4.379

8.  The Aphelenchus avenae genome highlights evolutionary adaptation to desiccation.

Authors:  Xuehua Wan; Jennifer A Saito; Shaobin Hou; Scott M Geib; Anton Yuryev; Lynne M Higa; Christopher Z Womersley; Maqsudul Alam
Journal:  Commun Biol       Date:  2021-10-28

9.  In Silico Characterisation of the Late Embryogenesis Abundant (LEA) Protein Families and Their Role in Desiccation Tolerance in Ramonda serbica Panc.

Authors:  Ana Pantelić; Strahinja Stevanović; Sonja Milić Komić; Nataša Kilibarda; Marija Vidović
Journal:  Int J Mol Sci       Date:  2022-03-24       Impact factor: 5.923

10.  Subcellular Localization of Seed-Expressed LEA_4 Proteins Reveals Liquid-Liquid Phase Separation for LEA9 and for LEA48 Homo- and LEA42-LEA48 Heterodimers.

Authors:  Orarat Ginsawaeng; Carolin Heise; Rohit Sangwan; Daniel Karcher; Itzell Euridice Hernández-Sánchez; Arun Sampathkumar; Ellen Zuther
Journal:  Biomolecules       Date:  2021-11-25
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