Literature DB >> 33065110

Contributions of Histone Variants in Nucleosome Structure and Function.

Hitoshi Kurumizaka1, Tomoya Kujirai2, Yoshimasa Takizawa2.   

Abstract

Chromatin compacts genomic DNA in eukaryotes. The primary chromatin unit is the nucleosome core particle, composed of four pairs of the core histones, H2A, H2B, H3, and H4, and 145-147 base pairs of DNA. Since replication, recombination, repair, and transcription take place in chromatin, the structure and dynamics of the nucleosome must be versatile. These nucleosome characteristics underlie the epigenetic regulation of genomic DNA. In higher eukaryotes, many histone variants have been identified as non-allelic isoforms, which confer nucleosome diversity. In this article, we review the manifold types of nucleosomes produced by histone variants, which play important roles in the epigenetic regulation of chromatin.
Copyright © 2020 The Author(s). Published by Elsevier Ltd.. All rights reserved.

Entities:  

Keywords:  chromatin; epigenetics; histone variant; nucleosome; structure

Year:  2020        PMID: 33065110     DOI: 10.1016/j.jmb.2020.10.012

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  9 in total

Review 1.  Obstacles and opportunities for base excision repair in chromatin.

Authors:  Dana J Biechele-Speziale; Treshaun B Sutton; Sarah Delaney
Journal:  DNA Repair (Amst)       Date:  2022-05-28

Review 2.  Histone variants: The unsung guardians of the genome.

Authors:  Ernest O N Phillips; Akash Gunjan
Journal:  DNA Repair (Amst)       Date:  2022-02-17

Review 3.  Is There a Histone Code for Cellular Quiescence?

Authors:  Kenya Bonitto; Kirthana Sarathy; Kaiser Atai; Mithun Mitra; Hilary A Coller
Journal:  Front Cell Dev Biol       Date:  2021-10-29

4.  Histone variant H2A.B-H2B dimers are spontaneously exchanged with canonical H2A-H2B in the nucleosome.

Authors:  Rina Hirano; Yasuhiro Arimura; Tomoya Kujirai; Mikihiro Shibata; Aya Okuda; Ken Morishima; Rintaro Inoue; Masaaki Sugiyama; Hitoshi Kurumizaka
Journal:  Commun Biol       Date:  2021-02-12

Review 5.  Tackling tumor microenvironment through epigenetic tools to improve cancer immunotherapy.

Authors:  Iris Lodewijk; Sandra P Nunes; Rui Henrique; Carmen Jerónimo; Marta Dueñas; Jesús M Paramio
Journal:  Clin Epigenetics       Date:  2021-03-24       Impact factor: 6.551

Review 6.  Nuclear Dynamics and Chromatin Structure: Implications for Pancreatic Cancer.

Authors:  Luis F Flores; Brooke R Tader; Ezequiel J Tolosa; Ashley N Sigafoos; David L Marks; Martin E Fernandez-Zapico
Journal:  Cells       Date:  2021-10-01       Impact factor: 6.600

7.  Unusual nucleosome formation and transcriptome influence by the histone H3mm18 variant.

Authors:  Seiya Hirai; Kosuke Tomimatsu; Atsuko Miyawaki-Kuwakado; Yoshimasa Takizawa; Tetsuro Komatsu; Taro Tachibana; Yutaro Fukushima; Yasuko Takeda; Lumi Negishi; Tomoya Kujirai; Masako Koyama; Yasuyuki Ohkawa; Hitoshi Kurumizaka
Journal:  Nucleic Acids Res       Date:  2022-01-11       Impact factor: 16.971

Review 8.  Nucleosome Structures Built from Highly Divergent Histones: Parasites and Giant DNA Viruses.

Authors:  Shoko Sato; Mariko Dacher; Hitoshi Kurumizaka
Journal:  Epigenomes       Date:  2022-08-02

Review 9.  Polyphenols as Potent Epigenetics Agents for Cancer.

Authors:  Peramaiyan Rajendran; Salaheldin Abdelraouf Abdelsalam; Kaviyarasi Renu; Vishnupriya Veeraraghavan; Rebai Ben Ammar; Emad A Ahmed
Journal:  Int J Mol Sci       Date:  2022-10-03       Impact factor: 6.208

  9 in total

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