Literature DB >> 35220000

Histone variants: The unsung guardians of the genome.

Ernest O N Phillips1, Akash Gunjan2.   

Abstract

Histones H2A, H2B, H3, H4 and H1 are highly conserved, positively charged proteins which form a disc-shaped protein core around which genomic DNA is wrapped to form a nucleosome. Immediately following DNA synthesis, replication-dependent canonical histones help package the DNA into nucleosomes to form compact chromatin fibers that can fit within the confines of the cell nucleus. Histone variants, which vary from the canonical histones in their primary amino acid sequence and expression patterns, replace their canonical counterparts throughout the cell cycle in important biological processes such as transcription, replication, DNA repair and heterochromatin formation. DNA damage is a continual threat to genomic stability and cell survival. Unrepaired DNA lesions are either lethal or can promote mutations if the damaged cells escape programmed cell death due to apoptosis. In order to repair DNA damage, cells use multiple DNA repair pathways, all of which require the recruitment of a multiple DNA damage signaling and repair factors. In order for these repair factors to be recruited efficiently and function properly at sites of DNA damage, the local chromatin environment surrounding the DNA lesion is often altered. Cells are able to regulate chromatin structure in the vicinity of DNA lesions through the addition of posttranslational modifications on histones and DNA, as well as through histone variant incorporation or removal. Recruitment or removal of histone variants at sites of DNA damage can alter the local chromatin structure by destabilizing it and making it more accessible to repair factors. Alternatively, some histone variants and their modifications may also provide specific binding sites for the recruitment of various DNA repair factors, thereby influencing repair pathway choice or repair efficiency, or both. This review seeks to provide an overview of our current understanding of the roles played by histone variants in DNA repair, especially in mammalian cells.
Copyright © 2022 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Cancer; Chromatin; DNA damage; DNA repair; Genome stability; Histone variant

Mesh:

Substances:

Year:  2022        PMID: 35220000      PMCID: PMC9248346          DOI: 10.1016/j.dnarep.2022.103301

Source DB:  PubMed          Journal:  DNA Repair (Amst)        ISSN: 1568-7856


  211 in total

1.  Interplay between Ino80 and Swr1 chromatin remodeling enzymes regulates cell cycle checkpoint adaptation in response to DNA damage.

Authors:  Manolis Papamichos-Chronakis; Jocelyn E Krebs; Craig L Peterson
Journal:  Genes Dev       Date:  2006-09-01       Impact factor: 11.361

2.  Differential effect of H1 variant overproduction on gene expression is due to differences in the central globular domain.

Authors:  D T Brown; A Gunjan; B T Alexander; D B Sittman
Journal:  Nucleic Acids Res       Date:  1997-12-15       Impact factor: 16.971

3.  DNA double-strand break-induced phosphorylation of Drosophila histone variant H2Av helps prevent radiation-induced apoptosis.

Authors:  James P Madigan; Heather L Chotkowski; Robert L Glaser
Journal:  Nucleic Acids Res       Date:  2002-09-01       Impact factor: 16.971

4.  Please do not disturb: destruction of chromatin structure by supravital nucleic acid probes revealed by a novel assay of DNA-histone interaction.

Authors:  Donald Wlodkowic; Zbigniew Darzynkiewicz
Journal:  Cytometry A       Date:  2008-10       Impact factor: 4.355

5.  Proteomics analysis of the centromere complex from HeLa interphase cells: UV-damaged DNA binding protein 1 (DDB-1) is a component of the CEN-complex, while BMI-1 is transiently co-localized with the centromeric region in interphase.

Authors:  Chikashi Obuse; Hua Yang; Naohito Nozaki; Shouhei Goto; Tuneko Okazaki; Kinya Yoda
Journal:  Genes Cells       Date:  2004-02       Impact factor: 1.891

6.  A solitary human H3 histone gene on chromosome 1.

Authors:  W Albig; J Ebentheuer; G Klobeck; J Kunz; D Doenecke
Journal:  Hum Genet       Date:  1996-04       Impact factor: 4.132

7.  Histone H3.1 and H3.3 complexes mediate nucleosome assembly pathways dependent or independent of DNA synthesis.

Authors:  Hideaki Tagami; Dominique Ray-Gallet; Geneviève Almouzni; Yoshihiro Nakatani
Journal:  Cell       Date:  2004-01-09       Impact factor: 41.582

8.  Replication Stress Shapes a Protective Chromatin Environment across Fragile Genomic Regions.

Authors:  Jeongkyu Kim; David Sturgill; Robin Sebastian; Simran Khurana; Andy D Tran; Garrett B Edwards; Alex Kruswick; Sandra Burkett; Eri K Hosogane; William W Hannon; Urbain Weyemi; William M Bonner; Karolin Luger; Philipp Oberdoerffer
Journal:  Mol Cell       Date:  2017-12-14       Impact factor: 17.970

9.  A macrohistone variant links dynamic chromatin compaction to BRCA1-dependent genome maintenance.

Authors:  Simran Khurana; Michael J Kruhlak; Jeongkyu Kim; Andy D Tran; Jinping Liu; Katherine Nyswaner; Lei Shi; Parthav Jailwala; Myong-Hee Sung; Ofir Hakim; Philipp Oberdoerffer
Journal:  Cell Rep       Date:  2014-08-14       Impact factor: 9.423

10.  Cancer-associated mutations of histones H2B, H3.1 and H2A.Z.1 affect the structure and stability of the nucleosome.

Authors:  Yasuhiro Arimura; Masae Ikura; Risa Fujita; Mamiko Noda; Wataru Kobayashi; Naoki Horikoshi; Jiying Sun; Lin Shi; Masayuki Kusakabe; Masahiko Harata; Yasuyuki Ohkawa; Satoshi Tashiro; Hiroshi Kimura; Tsuyoshi Ikura; Hitoshi Kurumizaka
Journal:  Nucleic Acids Res       Date:  2018-11-02       Impact factor: 16.971

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