Literature DB >> 33052802

Phylogenomic analyses of the Staphylococcaceae family suggest the reclassification of five species within the genus Staphylococcus as heterotypic synonyms, the promotion of five subspecies to novel species, the taxonomic reassignment of five Staphylococcus species to Mammaliicoccus gen. nov., and the formal assignment of Nosocomiicoccus to the family Staphylococcaceae.

Munusamy Madhaiyan1,2, Joseph S Wirth3, Venkatakrishnan Sivaraj Saravanan4.   

Abstract

Phylogenetic analyses based on 16S rRNA gene sequences of members of the family Staphylococcaceae showed the presence of para- and polyphyletic genera. This finding prompted a thorough investigation into the taxonomy of the Staphylococcaceae family by analysing their core genome phylogeny complemented with genome-based indices such as digital DNA-DNA hybridization, average nucleotide identity and average amino acid identity. The resulting data suggested the following proposals: Auricoccus indicus was reduced in taxonomic rank as a later heterotypic synonym of Abyssicoccus albus; Staphylococcus petrasii subsp. jettensis as a later heterotypic synonym of Staphylococcus petrasii subsp. petrasii; the unification of Staphylococcus aureus subsp. anaerobius and Staphylococcus aureus subsp. aureus as Staphylococcus aureus; the unification of Staphylococcus carnosus subsp. utilis and Staphylococcus carnosus subsp. carnosus as Staphylococcus carnosus; the unification of Staphylococcus saprophyticus subsp. bovis and Staphylococcus saprophyticus subsp. saprophyticus as Staphylococcus saprophyticus; Staphylococcus succinis subsp. casei as the novel species Staphylococcus casei; Staphylococcus schleiferi subsp. coagulans as the novel species Staphylococcus coagulans; Staphylococcus petrasii subsp. croceilyticus as the novel species Staphylococcus croceilyticus; Staphylococcus petrasii subsp. pragensis as the novel species Staphylococcus pragensis; Staphylococcus cohnii subsp. urealyticus as the novel species Staphylococcus urealyticus; the reassignment of Staphylococcus sciuri, Staphylococcus fleurettii, Staphylococcus lentus, Staphylococcus stepanovicii and Staphylococcus vitulinus to the novel genus Mammaliicoccus with Mammaliicoccus sciuri as the type species; and the formal assignment of Nosocomiicoccus as a member of the family Staphylococcaceae.

Entities:  

Keywords:  Abyssicoccus; Mammaliicoccus; Nosocomiicoccus; Staphylococcaceae; Staphylococcus; genome-based taxonomy

Mesh:

Substances:

Year:  2020        PMID: 33052802     DOI: 10.1099/ijsem.0.004498

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  30 in total

1.  Characterization of antibiotic-resistant, coagulase-negative staphylococci from fresh produce and description of Staphylococcus shinii sp. nov. isolated from chives.

Authors:  Gyu-Sung Cho; Bo Li; Erik Brinks; Charles M A P Franz
Journal:  J Microbiol       Date:  2022-06-22       Impact factor: 2.902

2.  Genome Sequencing of Methicillin-Resistant and Methicillin-Susceptible Mammaliicoccus sciuri from Diseased Animals.

Authors:  Teddy Garcia-Aroca; Stephanie S R Souza; Odion O Ikhimiukor; Michael M Marcovici; Joshua T Smith; Sharlene Amador; Colin J McGonagle; Griffin J Nye; David B Needle; Robert Gibson; Cheryl P Andam
Journal:  Microbiol Resour Announc       Date:  2022-09-20

3.  Genome-based analyses reveal heterotypic synonyms of Streptomyces species and associated subspecies.

Authors:  Cong-Jian Li; Min Wang; Zhen Zhang; Xiao-Yang Zhi; Ling-Ling Yang
Journal:  Arch Microbiol       Date:  2022-08-30       Impact factor: 2.667

4.  Occurrence and characterization of methicillin-resistant Staphylococcus spp. in diseased dogs in Brazil.

Authors:  Flávia Mello Viegas; Jordana Almeida Santana; Brendhal Almeida Silva; Rafael Gariglio Clark Xavier; Cláudia Teixeira Bonisson; Júlia Lara Sette Câmara; Mário Cesar Rennó; João Luis Reis Cunha; Henrique César Pereira Figueiredo; Francisco Carlos Faria Lobato; Rodrigo Otávio Silveira Silva
Journal:  PLoS One       Date:  2022-06-03       Impact factor: 3.752

5.  Genome-Based Characterization of a Plasmid-Associated Micrococcin P1 Biosynthetic Gene Cluster and Virulence Factors in Mammaliicoccus sciuri IMDO-S72.

Authors:  David Van der Veken; Charlie Hollanders; Marko Verce; Chris Michiels; Steven Ballet; Stefan Weckx; Frédéric Leroy
Journal:  Appl Environ Microbiol       Date:  2021-12-22       Impact factor: 5.005

6.  Multidrug-resistant Staphylococcus cohnii and Staphylococcus urealyticus isolates from German dairy farms exhibit resistance to beta-lactam antibiotics and divergent penicillin-binding proteins.

Authors:  Tobias Lienen; Arne Schnitt; Jens Andre Hammerl; Stephen F Marino; Sven Maurischat; Bernd-Alois Tenhagen
Journal:  Sci Rep       Date:  2021-03-16       Impact factor: 4.379

7.  Phenotypic and Molecular Traits of Staphylococcus coagulans Associated with Canine Skin Infections in Portugal.

Authors:  Sofia Santos Costa; Valéria Oliveira; Maria Serrano; Constança Pomba; Isabel Couto
Journal:  Antibiotics (Basel)       Date:  2021-05-02

8.  Antimicrobial Resistance Profiles of Coagulase-Negative Staphylococci in Community-Based Healthy Individuals in Germany.

Authors:  Gabriella Marincola; Olivia Liong; Christoph Schoen; Alaa Abouelfetouh; Aisha Hamdy; Freya D R Wencker; Tessa Marciniak; Karsten Becker; Robin Köck; Wilma Ziebuhr
Journal:  Front Public Health       Date:  2021-06-17

9.  Mobile Oxazolidinone Resistance Genes in Gram-Positive and Gram-Negative Bacteria.

Authors:  Stefan Schwarz; Wanjiang Zhang; Xiang-Dang Du; Henrike Krüger; Andrea T Feßler; Shizhen Ma; Yao Zhu; Congming Wu; Jianzhong Shen; Yang Wang
Journal:  Clin Microbiol Rev       Date:  2021-06-02       Impact factor: 50.129

10.  Evolutionary and Functional Analysis of Coagulase Positivity among the Staphylococci.

Authors:  Amy C Pickering; Gonzalo Yebra; Xiangyu Gong; Mariya I Goncheva; Bryan A Wee; Alison C MacFadyen; Lukas F Muehlbauer; Joana Alves; Robyn A Cartwright; Gavin K Paterson; J Ross Fitzgerald
Journal:  mSphere       Date:  2021-08-04       Impact factor: 4.389

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