Literature DB >> 36125295

Genome Sequencing of Methicillin-Resistant and Methicillin-Susceptible Mammaliicoccus sciuri from Diseased Animals.

Teddy Garcia-Aroca1, Stephanie S R Souza1, Odion O Ikhimiukor1, Michael M Marcovici1, Joshua T Smith2, Sharlene Amador3, Colin J McGonagle3, Griffin J Nye3, David B Needle4, Robert Gibson4, Cheryl P Andam1.   

Abstract

Mammaliicoccus sciuri (previously Staphylococcus sciuri) is a frequent colonizer of mammals. We report the draft genomes of a methicillin-resistant strain (2254A) isolated from an armadillo and a methicillin-susceptible strain (6942A) from a cow. Genomes were sequenced using long-read Nanopore sequencing.

Entities:  

Year:  2022        PMID： 36125295      PMCID： PMC9583799          DOI： 10.1128/mra.00714-22

Source DB:  PubMed          Journal:  Microbiol Resour Announc        ISSN： 2576-098X


  18 in total

1.  Characterization of methicillin-resistant Staphylococcus sciuri isolates from industrially raised pigs, cattle and broiler chickens.

Authors:  Stéphanie Nemeghaire; Wannes Vanderhaeghen; M Angeles Argudín; Freddy Haesebrouck; Patrick Butaye
Journal:  J Antimicrob Chemother       Date:  2014-07-25       Impact factor: 5.790

2.  Assembly of long, error-prone reads using repeat graphs.

Authors:  Mikhail Kolmogorov; Jeffrey Yuan; Yu Lin; Pavel A Pevzner
Journal:  Nat Biotechnol       Date:  2019-04-01       Impact factor: 54.908

3.  Evolutionary Origin of the Staphylococcal Cassette Chromosome mec (SCCmec).

Authors:  Joana Rolo; Peder Worning; Jesper Boye Nielsen; Rory Bowden; Ons Bouchami; Peter Damborg; Luca Guardabassi; Vincent Perreten; Alexander Tomasz; Henrik Westh; Hermínia de Lencastre; Maria Miragaia
Journal:  Antimicrob Agents Chemother       Date:  2017-05-24       Impact factor: 5.191

4.  A highly pathogenic strain of Staphylococcus sciuri caused fatal exudative epidermitis in piglets.

Authors:  Shixi Chen; Yu Wang; Fuyong Chen; Hanchun Yang; Menghou Gan; Shijun J Zheng
Journal:  PLoS One       Date:  2007-01-10       Impact factor: 3.240

5.  CheckM: assessing the quality of microbial genomes recovered from isolates, single cells, and metagenomes.

Authors:  Donovan H Parks; Michael Imelfort; Connor T Skennerton; Philip Hugenholtz; Gene W Tyson
Journal:  Genome Res       Date:  2015-05-14       Impact factor: 9.043

6.  Nasal and pharyngeal carriage of methicillin-resistant Staphylococcus sciuri among hospitalised patients and healthcare workers in a Serbian university hospital.

Authors:  Ivana Cirkovic; Jasmina Trajkovic; Tomasz Hauschild; Paal Skytt Andersen; Adebayo Shittu; Anders Rhod Larsen
Journal:  PLoS One       Date:  2017-09-19       Impact factor: 3.240

7.  High throughput ANI analysis of 90K prokaryotic genomes reveals clear species boundaries.

Authors:  Chirag Jain; Luis M Rodriguez-R; Adam M Phillippy; Konstantinos T Konstantinidis; Srinivas Aluru
Journal:  Nat Commun       Date:  2018-11-30       Impact factor: 14.919

8.  Performance of neural network basecalling tools for Oxford Nanopore sequencing.

Authors:  Ryan R Wick; Louise M Judd; Kathryn E Holt
Journal:  Genome Biol       Date:  2019-06-24       Impact factor: 13.583

9.  CARD 2020: antibiotic resistome surveillance with the comprehensive antibiotic resistance database.

Authors:  Brian P Alcock; Amogelang R Raphenya; Tammy T Y Lau; Kara K Tsang; Mégane Bouchard; Arman Edalatmand; William Huynh; Anna-Lisa V Nguyen; Annie A Cheng; Sihan Liu; Sally Y Min; Anatoly Miroshnichenko; Hiu-Ki Tran; Rafik E Werfalli; Jalees A Nasir; Martins Oloni; David J Speicher; Alexandra Florescu; Bhavya Singh; Mateusz Faltyn; Anastasia Hernandez-Koutoucheva; Arjun N Sharma; Emily Bordeleau; Andrew C Pawlowski; Haley L Zubyk; Damion Dooley; Emma Griffiths; Finlay Maguire; Geoff L Winsor; Robert G Beiko; Fiona S L Brinkman; William W L Hsiao; Gary V Domselaar; Andrew G McArthur
Journal:  Nucleic Acids Res       Date:  2020-01-08       Impact factor: 16.971

10.  AMRFinderPlus and the Reference Gene Catalog facilitate examination of the genomic links among antimicrobial resistance, stress response, and virulence.

Authors:  Michael Feldgarden; Vyacheslav Brover; Narjol Gonzalez-Escalona; Jonathan G Frye; Julie Haendiges; Daniel H Haft; Maria Hoffmann; James B Pettengill; Arjun B Prasad; Glenn E Tillman; Gregory H Tyson; William Klimke
Journal:  Sci Rep       Date:  2021-06-16       Impact factor: 4.996
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