Literature DB >> 33036785

SWATH-MS-Based Proteomics: Strategies and Applications in Plants.

Mo-Xian Chen1, Youjun Zhang2, Alisdair R Fernie2, Ying-Gao Liu3, Fu-Yuan Zhu4.   

Abstract

Most applied proteomic approaches require labeling steps. Recent technological advances provide an alternative label-free proteomics approach: SWATH-MS. This powerful tool is now widely used in animal studies but has drawn far less attention in plants. Here we summarize how this promising technology can be applied to facilitate functional analysis in plant research.
Copyright © 2020 Elsevier Ltd. All rights reserved.

Keywords:  SWATH mass spectrometry; label-free proteomics; plants

Year:  2020        PMID： 33036785     DOI： 10.1016/j.tibtech.2020.09.002

Source DB:  PubMed          Journal:  Trends Biotechnol        ISSN： 0167-7799            Impact factor:   19.536


  17 in total

1.  Disclosing proteins in the leaves of cork oak plants associated with the immune response to Phytophthora cinnamomi inoculation in the roots: A long-term proteomics approach.

Authors:  Ana Cristina Coelho; Rosa Pires; Gabriela Schütz; Cátia Santa; Bruno Manadas; Patrícia Pinto
Journal:  PLoS One       Date:  2021-01-22       Impact factor: 3.240

2.  In Situ Observation of Abscisic Acid Distribution in Major Crop Species by Immunofluorescence Labeling.

Authors:  Mo-Xian Chen; Chong-Chong Lu; Jianhua Zhang; Ying-Gao Liu
Journal:  Methods Mol Biol       Date:  2022

3.  SWATH-MS Proteomic Approach to Discover Novel Protein Targets and Pathways in Response to Abscisic Acid.

Authors:  Bei Gao; Mo-Xian Chen; Fu-Yuan Zhu
Journal:  Methods Mol Biol       Date:  2022

Review 4.  Alternative Splicing and Its Roles in Plant Metabolism.

Authors:  Pui Ying Lam; Lanxiang Wang; Clive Lo; Fu-Yuan Zhu
Journal:  Int J Mol Sci       Date:  2022-07-01       Impact factor: 6.208

5.  Phylogeny and conservation of plant U2A/U2A', a core splicing component in U2 spliceosomal complex.

Authors:  Yue Liu; Yuan Tian; Lan-Xiang Wang; Tao Fan; Jianhua Zhang; Mo-Xian Chen; Ying-Gao Liu
Journal:  Planta       Date:  2021-12-23       Impact factor: 4.116

6.  Comparative transcriptome analysis of coleorhiza development in japonica and Indica rice.

Authors:  Tao Song; Debatosh Das; Neng-Hui Ye; Guan-Qun Wang; Fu-Yuan Zhu; Mo-Xian Chen; Feng Yang; Jian-Hua Zhang
Journal:  BMC Plant Biol       Date:  2021-11-04       Impact factor: 4.215

7.  SWATH-MS based quantitive proteomics reveal regulatory metabolism and networks of androdioecy breeding system in Osmanthus fragrans.

Authors:  Yi-Fan Duan; Cheng Zhang; Min Zhang; Yu Ye; Kai-Lu Zhang; Mo-Xian Chen; Lin Chen; Xian-Rong Wang; Fu-Yuan Zhu
Journal:  BMC Plant Biol       Date:  2021-10-13       Impact factor: 4.215

Review 8.  Shotgun Proteomics as a Powerful Tool for the Study of the Proteomes of Plants, Their Pathogens, and Plant-Pathogen Interactions.

Authors:  Sadegh Balotf; Richard Wilson; Robert S Tegg; David S Nichols; Calum R Wilson
Journal:  Proteomes       Date:  2022-01-19

9.  Rapid tryptic peptide mapping of human serum albumin using DI-MS/MSALL.

Authors:  Ke Zhang; Xingcheng Gong; Qian Wang; Pengfei Tu; Jun Li; Yuelin Song
Journal:  RSC Adv       Date:  2022-03-29       Impact factor: 3.361

10.  Nigella sativa callus treated with sodium azide exhibit augmented antioxidant activity and DNA damage inhibition.

Authors:  Mohammed Shariq Iqbal; Zahra Iqbal; Abeer Hashem; Al-Bandari Fahad Al-Arjani; Elsayed Fathi Abd-Allah; Asif Jafri; Shamim Akhtar Ansari; Mohammad Israil Ansari
Journal:  Sci Rep       Date:  2021-07-06       Impact factor: 4.379
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