| Literature DB >> 33035448 |
Liling Chaw, Wee Chian Koh, Sirajul Adli Jamaludin, Lin Naing, Mohammad Fathi Alikhan, Justin Wong.
Abstract
We report the transmission dynamics of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) across different settings in Brunei. An initial cluster of SARS-CoV-2 cases arose from 19 persons who had attended the Tablighi Jama'at gathering in Malaysia, resulting in 52 locally transmitted cases. The highest nonprimary attack rates (14.8%) were observed from a subsequent religious gathering in Brunei and in households of attendees (10.6%). Household attack rates from symptomatic case-patients were higher (14.4%) than from asymptomatic (4.4%) or presymptomatic (6.1%) case-patients. Workplace and social settings had attack rates of <1%. Our analyses highlight that transmission of SARS-CoV-2 varies depending on environmental, behavioral, and host factors. We identify red flags for potential superspreading events, specifically densely populated gatherings with prolonged exposure in enclosed settings, persons with recent travel history to areas with active SARS-CoV-2 infections, and group behaviors. We propose differentiated testing strategies to account for differing transmission risk.Entities:
Keywords: Brunei; COVID-19; SARS; SARS-CoV-2; coronavirus; coronavirus disease; respiratory infections; severe acute respiratory syndrome coronavirus 2; viruses; zoonoses
Mesh:
Year: 2020 PMID: 33035448 PMCID: PMC7588541 DOI: 10.3201/eid2611.202263
Source DB: PubMed Journal: Emerg Infect Dis ISSN: 1080-6040 Impact factor: 6.883
Figure 1Epidemic curve for the first 135 cases of coronavirus disease (COVID-19) in Brunei Darussalam by cluster groups. Tablighi Jama’at cases were related to a religious gathering in Kuala Lumpur, Malaysia, during February 28–March 1, 2020.
Figure 2A cluster of coronavirus disease cases in Brunei Darussalam. Epidemiologic links are illustrated by generation and symptomatic status. Generation 0 occurred among attendees of a Tablighi Jama’at gathering in Kuala Lumpur, Malaysia, during February 28–March 1, 2020. Generations 1, 2, and 3 occurred in Brunei. #, case number.
Demographic and clinical characteristics of cases in a cluster of coronavirus disease among a Tablighi Jamaat community, Brunei
| Characteristics | Overall, n = 71 | Primary cases, n = 19 | Nonprimary cases, n = 52 | p value |
|---|---|---|---|---|
| Median age, y (IQR) | 33.0 (21–50) | 35.0 (33– 59.5) | 29.0 (20–46) | 0.009 |
| Range | 0.75–68 | 17–64 | 0.75–68 |
|
| Age group, y | ||||
| 0–9 | 4 (5.6) | 0 (0.0) | 4 (5.6) | 0.002 |
| 10–19 | 9 (12.7) | 1 (1.4) | 8 (11.3) | |
| 20–29 | 16 (22.5) | 1 (1.4) | 15 (21.1) | |
| 30–39 | 14 (19.7) | 8 (11.3) | 6 (8.5) | |
| 40–49 | 10 (14.1) | 1 (1.4) | 9 (12.7) | |
| 50–59 | 11 (15.5) | 3 (4.2) | 8 (11.3) | |
| 60–69 | 7 (9.9) | 5 (7.0) | 2 (2.8) | |
| Sex | ||||
| F | 25 (35.2) | 0 (0.0) | 25 (48.1) | <0.001 |
| M | 46 (64.8) | 19 (100) | 27 (51.9) | |
| Underlying conditions | ||||
| Obesity | 4 (5.6) | 2 (10.5) | 2 (3.8) | 0.289 |
| Heart disease | 4 (5.6) | 3 (15.8) | 1 (1.9) | 0.056 |
| Respiratory disease | 5 (7.0) | 2 (10.5) | 3 (5.8) | 0.605 |
| Cancer | 1 (1.4) | 1 (5.3) | 0 (0.0) | 0.268 |
| Diabetes mellitus | 5 (7.0) | 3 (15.8) | 2 (3.8) | 0.115 |
| Symptom status | ||||
| Symptomatic | 40 (56.3) | 8 (42.1) | 32 (61.5) | 0.265 |
| Median time from symptom onset to diagnosis, d (range; IQR) | 4.0 (0–15; 2–6) | 3.5 (0–7; 2.75–6) | 4.0 (1–15; 2–6.25) | 0.746 |
| Presymptomatic | 22 (31.0) | 7 (36.8) | 15 (28.8) | |
| Median time from symptom to and NP swab collection, d (range; IQR) | 0 (−7 to −1; –2.5 to 0) | 0 (−1 to 1; 0–1) | 0 (−7 to 1; –3 to 0) | 0.034 |
| Asymptomatic | 9 (12.7) | 4 (21.1) | 5 (9.5) |
|
| Symptoms ever reported | ||||
| Fever | 42 (59.2) | 9 (47.4) | 33 (63.5) | 0.343 |
| Cough | 42 (59.2) | 14 (73.7) | 28 (53.8) | 0.218 |
| Runny nose | 25 (35.2) | 7 (36.8) | 18 (34.6) | 1.000 |
| Sore throat | 42 (59.2) | 9 (47.4) | 33 (63.5) | 0.342 |
| Disease severity | ||||
| Asymptomatic | 9 (12.7) | 4 (21.1) | 5 (9.6) | 0.278 |
| Mild | 52 (73.2) | 12 (63.2) | 40 (76.9) | |
| Moderate | 7 (9.9) | 2 (10.5) | 5 (9.6) | |
| Severe or critical | 3 (4.2) | 1 (5.3) | 2 (3.9) |
*Values are no. (%) except as indicated. IQR, interquartile range; NP, nasopharyngeal.
Risk factors for severe acute respiratory syndrome coronavirus 2 infection among close contacts, Brunei*
| Characteristics | Total, n = 1,755 | Positive, n = 51 | Attack rate, % (95% CI) | Crude risk ratio (95% CI)† | Adjusted risk ratio (95% CI)‡ |
|---|---|---|---|---|---|
| Sex | |||||
| M | 913 | 24 | 2.6 (1.7–3.9) | Referent | Referent |
| F | 842 | 27 | 3.2 (2.2–4.7) | 1.22 (0.71–2.11) | 1.23 (0.69–2.27) |
| Age group | |||||
| 0–9 | 267 | 4 | 1.5 (0.4–3.8)§ | Referent | Referent |
| 10–19 | 163 | 8 | 4.9 (2.3–9.8) | 3.28 (1.05–12.12) | 1.92 (0.63–7.03) |
| 20–29 | 364 | 13 | 3.6 (2.0–6.2) | 2.38 (0.85–8.39) | 1.91 (0.70–6.61) |
| 30–39 | 441 | 6 | 1.4 (0.6–3.1) | 0.91 (0.26–3.53) | 0.85 (0.24–3.38) |
| 40–49 | 255 | 9 | 3.5 (1.7–6.8) | 2.36 (0.78–8.61) | 1.95 (0.63–7.32) |
| 50–59 | 174 | 8 | 4.6 (2.2–9.2) | 3.07 (0.98–11.36) | 1.84 (0.58–7.05) |
| ≥60 | 83 | 3 | 3.6 (0.8–10.2)§ | 2.41 (0.48–10.74) | 1.00 (0.20–4.51) |
| Types of close contact | |||||
| Social | 445 | 4 | 0.9 (0.2–2.3)§ | Referent | Referent |
| Relatives | 144 | 5 | 3.5 (1.3–8.3) | 3.86 (1.04, 15.43) |
|
| Local religious gathering | 54 | 8 | 14.8 (7.1–27.7) | 16.48 (5.38–60.13) |
|
| Workplace or school | 848 | 6 | 0.7 (0.3–1.6) | 0.79 (0.23–3.07) | 0.79 (0.23–3.10) |
| Household | |||||
| Child | 85 | 12 | 14.1 (7.8–23.8) | 15.71 (5.62–55.16) |
|
| Spouse | 31 | 13 | 41.9 (24.1–60.7) | 46.65 (17.77–158.39) |
|
| Others¶ | 148 | 3 | 2.0 (0.4–5.8)§ | 2.26 (0.45–10.2) | 2.23 (0.44–10.0) |
*Bold text indicates statistically significant value. †Calculated by using simple log-binomial regression. ‡Calculated by using multiple log-binomial regression (sex, p = 0.485; age group, p = 0.339; types of close contact, p<0.001). §For counts <5, calculated by using binomial 95% CI. ¶Others include siblings, parents, housekeepers, or relatives, such as grandparents and grandchildren.
Attack rates in different settings stratified by symptom status of the primary case of severe acute respiratory syndrome coronavirus 2, Brunei*
| Setting and symptom status | Total, n = 1,701 | Positive, n = 43 | Attack rate, % (95% CI) | Crude risk ratio (95% CI)† | p value |
|---|---|---|---|---|---|
| Household | |||||
| Asymptomatic or presymptomatic | 111 | 6 | 5.4 (1.2–9.6) | Referent | |
| Symptomatic | 153 | 22 | 14.4 (8.8–19.9) |
| 0.027 |
| Nonhousehold‡ | |||||
| Asymptomatic or presymptomatic | 580 | 9 | 1.6 (0.5–2.6) | Referent | |
| Symptomatic | 857 | 6 | 0.7 (0.1–1.3) | 0.45 (0.16–1.26) | 0.129 |
| Overall | |||||
| Asymptomatic or presymptomatic | 691 | 15 | 2.2 (1.1–3.3) | Referent | |
| Symptomatic | 1,010 | 28 | 2.8 (1.8–3.8) | 1.28 (0.69–2.37) | 0.439 |
*Bold text indicates statistically significant value. † Calculated by using simple log-binomial regression. ‡Includes visits to relatives, workplace, and social settings. The local religious gathering is excluded because 3 primary cases at the event had varying symptom status and we could not ascertain how transmission occurred.
Characteristics and mean observed reproductive number for each setting in which infection of severe acute respiratory syndrome coronavirus 2 occurred, Brunei
| Setting | No. nonprimary cases | Proportion of links with nonzero infections | Total no. of close contacts | Contacts traced per case | Range of setting size | Mean observed reproductive number (95% CI) |
|---|---|---|---|---|---|---|
| Household | 28 | 0.36 | 264 | 9.4 | 1–13 | 0.67 (0.44–0.96) |
| Relatives | 5 | 0.11 | 144 | 28.8 | 1–26 | 0.26 (0.09–0.61) |
| Workplace | 6 | 0.20 | 848 | 141.3 | 1–202 | 0.24 (0.09–0.52) |
| Social | 4 | 0.16 | 445 | 111.3 | 1–179 | 0.16 (0.04–0.41) |
| Local religious gathering | 8 | 1.00 | 54 | 6.8 | 54* | 2.67 (NA)* |
| Overall | 51 | 0.37 | 1,755 | 34.4 | 1–220 | 0.94 (0.70–1.24) |
*Indicates only a single event, so no range for setting size or calculated 95% CI are available. NA, not applicable.