Literature DB >> 33032255

Rewiring yeast metabolism to synthesize products beyond ethanol.

Francesca V Gambacorta1, Joshua J Dietrich1, Qiang Yan2, Brian F Pfleger3.   

Abstract

Saccharomyces cerevisiae, Baker's yeast, is the industrial workhorse for producing ethanol and the subject of substantial metabolic engineering research in both industry and academia. S. cerevisiae has been used to demonstrate production of a wide range of chemical products from glucose. However, in many cases, the demonstrations report titers and yields that fall below thresholds for industrial feasibility. Ethanol synthesis is a central part of S. cerevisiae metabolism, and redirecting flux to other products remains a barrier to industrialize strains for producing other molecules. Removing ethanol producing pathways leads to poor fitness, such as impaired growth on glucose. Here, we review metabolic engineering efforts aimed at restoring growth in non-ethanol producing strains with emphasis on relieving glucose repression associated with the Crabtree effect and rewiring metabolism to provide access to critical cellular building blocks. Substantial progress has been made in the past decade, but many opportunities for improvement remain.
Copyright © 2020 Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  Acetyl-CoA; Adaptive laboratory evolution; Crabtree–Warburg effect; Ethanol; Glucose; Metabolic engineering; Pyruvate decarboxylase deficient; Saccharomyces cerevisiae; Yeast

Year:  2020        PMID: 33032255      PMCID: PMC7736362          DOI: 10.1016/j.cbpa.2020.08.005

Source DB:  PubMed          Journal:  Curr Opin Chem Biol        ISSN: 1367-5931            Impact factor:   8.822


  69 in total

1.  Stable disruption of ethanol production by deletion of the genes encoding alcohol dehydrogenase isozymes in Saccharomyces cerevisiae.

Authors:  Yoshihiro Ida; Chikara Furusawa; Takashi Hirasawa; Hiroshi Shimizu
Journal:  J Biosci Bioeng       Date:  2011-10-26       Impact factor: 2.894

Review 2.  Impact of synthetic biology and metabolic engineering on industrial production of fine chemicals.

Authors:  David Jullesson; Florian David; Brian Pfleger; Jens Nielsen
Journal:  Biotechnol Adv       Date:  2015-02-26       Impact factor: 14.227

3.  SNF1 controls the glycolytic flux and mitochondrial respiration.

Authors:  Cecilia Martinez-Ortiz; Andres Carrillo-Garmendia; Blanca Flor Correa-Romero; Melina Canizal-García; Juan Carlos González-Hernández; Carlos Regalado-Gonzalez; Ivanna Karina Olivares-Marin; Luis Alberto Madrigal-Perez
Journal:  Yeast       Date:  2019-07-24       Impact factor: 3.239

4.  Enhanced production of 2,3-butanediol from xylose by combinatorial engineering of xylose metabolic pathway and cofactor regeneration in pyruvate decarboxylase-deficient Saccharomyces cerevisiae.

Authors:  Soo-Jung Kim; Hee-Jin Sim; Jin-Woo Kim; Ye-Gi Lee; Yong-Cheol Park; Jin-Ho Seo
Journal:  Bioresour Technol       Date:  2017-06-09       Impact factor: 9.642

5.  Malic acid production by Saccharomyces cerevisiae: engineering of pyruvate carboxylation, oxaloacetate reduction, and malate export.

Authors:  Rintze M Zelle; Erik de Hulster; Wouter A van Winden; Pieter de Waard; Cor Dijkema; Aaron A Winkler; Jan-Maarten A Geertman; Johannes P van Dijken; Jack T Pronk; Antonius J A van Maris
Journal:  Appl Environ Microbiol       Date:  2008-03-14       Impact factor: 4.792

6.  Reprogramming Yeast Metabolism from Alcoholic Fermentation to Lipogenesis.

Authors:  Tao Yu; Yongjin J Zhou; Mingtao Huang; Quanli Liu; Rui Pereira; Florian David; Jens Nielsen
Journal:  Cell       Date:  2018-08-09       Impact factor: 41.582

7.  An evolutionary perspective on the Crabtree effect.

Authors:  Thomas Pfeiffer; Annabel Morley
Journal:  Front Mol Biosci       Date:  2014-10-21

Review 8.  Glucose repression in Saccharomyces cerevisiae.

Authors:  Ömur Kayikci; Jens Nielsen
Journal:  FEMS Yeast Res       Date:  2015-07-22       Impact factor: 2.796

9.  Evaluation of pyruvate decarboxylase-negative Saccharomyces cerevisiae strains for the production of succinic acid.

Authors:  Ahmed Zahoor; Felix T F Küttner; Lars M Blank; Birgitta E Ebert
Journal:  Eng Life Sci       Date:  2019-08-29       Impact factor: 2.678

10.  Global rewiring of cellular metabolism renders Saccharomyces cerevisiae Crabtree negative.

Authors:  Zongjie Dai; Mingtao Huang; Yun Chen; Verena Siewers; Jens Nielsen
Journal:  Nat Commun       Date:  2018-08-03       Impact factor: 14.919

View more
  5 in total

1.  Rewiring regulation on respiro-fermentative metabolism relieved Crabtree effects in Saccharomyces cerevisiae.

Authors:  Yiming Zhang; Mo Su; Zheng Wang; Jens Nielsen; Zihe Liu
Journal:  Synth Syst Biotechnol       Date:  2022-06-15

Review 2.  β-Ionone: Its Occurrence and Biological Function and Metabolic Engineering.

Authors:  Antonello Paparella; Liora Shaltiel-Harpaza; Mwafaq Ibdah
Journal:  Plants (Basel)       Date:  2021-04-12

3.  Comparative functional genomics identifies an iron-limited bottleneck in a Saccharomyces cerevisiae strain with a cytosolic-localized isobutanol pathway.

Authors:  Francesca V Gambacorta; Ellen R Wagner; Tyler B Jacobson; Mary Tremaine; Laura K Muehlbauer; Mick A McGee; Justin J Baerwald; Russell L Wrobel; John F Wolters; Mike Place; Joshua J Dietrich; Dan Xie; Jose Serate; Shabda Gajbhiye; Lisa Liu; Maikayeng Vang-Smith; Joshua J Coon; Yaoping Zhang; Audrey P Gasch; Daniel Amador-Noguez; Chris Todd Hittinger; Trey K Sato; Brian F Pfleger
Journal:  Synth Syst Biotechnol       Date:  2022-03-18

4.  Enhancing fluxes through the mevalonate pathway in Saccharomyces cerevisiae by engineering the HMGR and β-alanine metabolism.

Authors:  Surui Lu; Chenyao Zhou; Xuena Guo; Zhengda Du; Yanfei Cheng; Zhaoyue Wang; Xiuping He
Journal:  Microb Biotechnol       Date:  2022-05-09       Impact factor: 6.575

5.  The multiple effects of REG1 deletion and SNF1 overexpression improved the production of S-adenosyl-L-methionine in Saccharomyces cerevisiae.

Authors:  Hailong Chen; Xiaoqin Chai; Yan Wang; Jing Liu; Guohai Zhou; Pinghe Wei; Yuhe Song; Lingman Ma
Journal:  Microb Cell Fact       Date:  2022-08-27       Impact factor: 6.352

  5 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.