| Literature DB >> 33023592 |
Karol Stasiak1, Magdalena Dunowska2, Jerzy Rola3.
Abstract
BACKGROUND: Equid herpesvirus 1 (EHV-1) infections are endemic worldwide, including Poland. Many are subclinical, but some are associated with respiratory disease, abortion, neonatal foal death, or neurological disease. We describe an outbreak of abortions in Arabian mares at a well-managed State stud farm in Poland. CASEEntities:
Keywords: Abortions; EHV-1; Equid herpesvirus 1; Latency; ORF30; ORF68; PCR
Mesh:
Year: 2020 PMID: 33023592 PMCID: PMC7539464 DOI: 10.1186/s12917-020-02586-y
Source DB: PubMed Journal: BMC Vet Res ISSN: 1746-6148 Impact factor: 2.741
Fig. 1Schematic presentation of the barn with pregnant mares. Grey rectangles represent boxes with mares that did not abort in 2017. Rectangles with crossed lines represent empty boxes. Date of abortion (■), anticipated (actual for Mare D) foaling date (▲), and quantitative cycle (Cq) values obtained in EHV-1 specific qPCR with DNA extracted from pooled tissue homogenates of lung, liver, spleen, heart and placenta (for fetuses) are listed for each mare that aborted. Mare D (*) did not abort, but lost a newborn foal. EHV-1 virus neutralisation titers (VNT) are specified for all mares in the barn
Fig. 2Phylogenetic tree of equid herpesvirus-1 based on 515 bp fragment from the ORF68 gene. The evolutionary history was inferred by using the Maximum Likelihood method based on the Kimura 2-parameter model [31]. The tree with the highest log likelihood (− 742.11) is shown. The percentage of trees in which the associated taxa clustered together is shown next to the branches. Initial tree(s) for the heuristic search were obtained automatically by applying Neighbor-Join and BioNJ algorithms to a matrix of pairwise distances estimated using the Maximum Composite Likelihood (MCL) approach, and then selecting the topology with superior log likelihood value. The tree is drawn to scale, with branch lengths measured in the number of substitutions per site. The analysis involved 41 nucleotide sequences including Polish EHV-1 sequences (n = 13) and international sequences (n = 28) sourced from GenBank (accession numbers included in the figure). All positions containing gaps and missing data were eliminated. There were a total of 495 positions in the final dataset. Evolutionary analyses were conducted in MEGA7 [32]. The clusters were labelled as groups I - VI according to [22]. The sequences obtained in the current study are labelled with red rectangles