Literature DB >> 33022674

Isolation of Highly Purified and Viable Retinal Endothelial Cells.

Nicholas W Chavkin1,2,3, Kenneth Walsh4,5, Karen K Hirschi4,6,7.   

Abstract

The neonatal mouse retinal vascularization model has been widely used in the vascular biology field to investigate mechanisms of angiogenesis and arterial-venous fate specification during blood vessel formation and maturation. Recent advances in next-generation sequencing can further elucidate mechanisms of blood vessel formation and remodeling in this, as well as other, vascular development models. However, an optimized method for isolating retinal endothelial cells that limits tissue digestion-induced cell damage is required for next-generation sequencing applications. In this study, we established a method for isolating neonatal retinal endothelial cells that optimizes cell viability and purity. The CD31+/CD45- endothelial cell population was fluorescence-activated cell sorting (FACS)-isolated from digested postnatal retinas, found to be highly enriched for endothelial cell gene expression, and exhibited no change in viability for 60 min post-FACS. Thus, this method for retinal endothelial cell isolation is compatible with next-generation sequencing applications. Combining this isolation method with next-generation sequencing will enable further delineation of mechanisms underlying vascular development and maturation.
© 2020 S. Karger AG, Basel.

Entities:  

Keywords:  Endothelial cells · Retinal vascular development · Cell isolation · Cell purification · Cell viability

Mesh:

Substances:

Year:  2020        PMID: 33022674      PMCID: PMC7850292          DOI: 10.1159/000510533

Source DB:  PubMed          Journal:  J Vasc Res        ISSN: 1018-1172            Impact factor:   1.934


  48 in total

1.  Culture of human endothelial cells from umbilical veins.

Authors:  Richard C M Siow
Journal:  Methods Mol Biol       Date:  2012

2.  Droplet-based combinatorial indexing for massive-scale single-cell chromatin accessibility.

Authors:  Caleb A Lareau; Fabiana M Duarte; Jennifer G Chew; Vinay K Kartha; Zach D Burkett; Andrew S Kohlway; Dmitry Pokholok; Martin J Aryee; Frank J Steemers; Ronald Lebofsky; Jason D Buenrostro
Journal:  Nat Biotechnol       Date:  2019-06-24       Impact factor: 54.908

3.  Dissociation of Tissues for Single-Cell Analysis.

Authors:  Andrew S Potter; S Steven Potter
Journal:  Methods Mol Biol       Date:  2019

4.  High-throughput single-cell ChIP-seq identifies heterogeneity of chromatin states in breast cancer.

Authors:  Kevin Grosselin; Adeline Durand; Justine Marsolier; Adeline Poitou; Elisabetta Marangoni; Fariba Nemati; Ahmed Dahmani; Sonia Lameiras; Fabien Reyal; Olivia Frenoy; Yannick Pousse; Marcel Reichen; Adam Woolfe; Colin Brenan; Andrew D Griffiths; Céline Vallot; Annabelle Gérard
Journal:  Nat Genet       Date:  2019-05-31       Impact factor: 38.330

5.  Isolation and Culture of Human Endothelial Cells from Micro- and Macro-vessels.

Authors:  Peter W Hewett
Journal:  Methods Mol Biol       Date:  2016

6.  A rapid and simple method for measuring thymocyte apoptosis by propidium iodide staining and flow cytometry.

Authors:  I Nicoletti; G Migliorati; M C Pagliacci; F Grignani; C Riccardi
Journal:  J Immunol Methods       Date:  1991-06-03       Impact factor: 2.303

7.  Oxygen-induced retinopathy in the mouse.

Authors:  L E Smith; E Wesolowski; A McLellan; S K Kostyk; R D'Amato; R Sullivan; P A D'Amore
Journal:  Invest Ophthalmol Vis Sci       Date:  1994-01       Impact factor: 4.799

8.  Single-cell chromatin accessibility reveals principles of regulatory variation.

Authors:  Jason D Buenrostro; Beijing Wu; Ulrike M Litzenburger; Dave Ruff; Michael L Gonzales; Michael P Snyder; Howard Y Chang; William J Greenleaf
Journal:  Nature       Date:  2015-06-17       Impact factor: 49.962

9.  Quartz-Seq2: a high-throughput single-cell RNA-sequencing method that effectively uses limited sequence reads.

Authors:  Yohei Sasagawa; Hiroki Danno; Hitomi Takada; Masashi Ebisawa; Kaori Tanaka; Tetsutaro Hayashi; Akira Kurisaki; Itoshi Nikaido
Journal:  Genome Biol       Date:  2018-03-09       Impact factor: 13.583

10.  CEL-Seq2: sensitive highly-multiplexed single-cell RNA-Seq.

Authors:  Tamar Hashimshony; Naftalie Senderovich; Gal Avital; Agnes Klochendler; Yaron de Leeuw; Leon Anavy; Dave Gennert; Shuqiang Li; Kenneth J Livak; Orit Rozenblatt-Rosen; Yuval Dor; Aviv Regev; Itai Yanai
Journal:  Genome Biol       Date:  2016-04-28       Impact factor: 13.583

View more
  4 in total

1.  Isolation of Murine Retinal Endothelial Cells for Next-Generation Sequencing.

Authors:  Nicholas W Chavkin; Shelby Cain; Kenneth Walsh; Karen K Hirschi
Journal:  J Vis Exp       Date:  2021-10-11       Impact factor: 1.355

2.  Endothelial cell cycle state determines propensity for arterial-venous fate.

Authors:  Nicholas W Chavkin; Gael Genet; Mathilde Poulet; Erin D Jeffery; Corina Marziano; Nafiisha Genet; Hema Vasavada; Elizabeth A Nelson; Bipul R Acharya; Anupreet Kour; Jordon Aragon; Stephanie P McDonnell; Mahalia Huba; Gloria M Sheynkman; Kenneth Walsh; Karen K Hirschi
Journal:  Nat Commun       Date:  2022-10-06       Impact factor: 17.694

3.  Intrinsic Expression of Coagulation Factors and Protease Activated Receptor 1 (PAR1) in Photoreceptors and Inner Retinal Layers.

Authors:  Zehavit Goldberg; Ifat Sher; Lamis Qassim; Joab Chapman; Ygal Rotenstreich; Efrat Shavit-Stein
Journal:  Int J Mol Sci       Date:  2022-01-17       Impact factor: 5.923

4.  The palliative effects of folic acid on retinal microvessels in diabetic retinopathy via regulating the metabolism of DNA methylation and hydroxymethylation.

Authors:  Xianli Liu; Hongbao Cui
Journal:  Bioengineered       Date:  2021-12       Impact factor: 3.269

  4 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.