Literature DB >> 32997436

Metastatic Low-Grade Sarcoma with CARS-ALK Fusion Dramatically Responded to Multiple ALK Tyrosine Kinase Inhibitors: A Case Report with Comprehensive Genomic Analysis.

Xiao-Dong Jiao1, Ke Liu1, Mingyan Xu2, Guanzhen Yu3, Danni Liu2, Tanxiao Huang2, Bao-Dong Qin1, Ming Liu2, Ying Wu1, Yan Ling1, Jun Liu1, Xi He1, Liangzhe Wang4, Yingmei Li2, Shifu Chen2,5, Yuan-Sheng Zang1.   

Abstract

This article reports a case of advanced metastatic low-grade sarcoma. The patient was diagnosed with an inoperable large (14 × 12 cm) lesion on his neck in September 2015 and underwent two ineffective chemotherapies in the following 4 months. Interestingly, although several pathologists could not agree on the histopathological diagnosis, the precise molecular pathological diagnosis was obtained using next-generation sequencing (NGS) and finally brought excellent therapeutic effects. The patient was detected to have CARS-ALK fusion by NGS and then was successfully treated with crizotinib orally. He received surgical resection of primary and metastatic lesions after tumor shrinkage. The combined treatment brought a durable response for 40 months. Although the tumor recurred in July 2019, the patient has been responding well to the second-line ALK tyrosine kinase inhibitor alectinib to date. We performed whole genome sequencing on the patient's primary, metastatic, and recurrent tumors and did comprehensive genomic analysis. Furthermore, our analysis results revealed that a whole genome duplication event might have happened during tumorigenesis of this case. KEY POINTS: To our best knowledge, this is the first report of a very successful treatment with first- and second-line ALK tyrosine kinase inhibitors for CARS-ALK fusion-positive metastatic low-grade sarcoma. Molecular pathological result can guide precision treatment for sarcoma, even when the exact histopathology cannot be obtained. Multiple samples from this patient were analyzed using whole genome sequencing. Results provided detailed genomic characteristics and showed tumor evolution of this low-grade sarcoma case. A whole genome duplication event might have happened during tumorigenesis of this low-grade sarcoma case. © AlphaMed Press 2020.

Entities:  

Year:  2020        PMID: 32997436      PMCID: PMC8018318          DOI: 10.1002/onco.13543

Source DB:  PubMed          Journal:  Oncologist        ISSN: 1083-7159


  16 in total

1.  Strelka2: fast and accurate calling of germline and somatic variants.

Authors:  Sangtae Kim; Konrad Scheffler; Aaron L Halpern; Mitchell A Bekritsky; Eunho Noh; Morten Källberg; Xiaoyu Chen; Yeonbin Kim; Doruk Beyter; Peter Krusche; Christopher T Saunders
Journal:  Nat Methods       Date:  2018-07-16       Impact factor: 28.547

2.  ClonEvol: clonal ordering and visualization in cancer sequencing.

Authors:  H X Dang; B S White; S M Foltz; C A Miller; J Luo; R C Fields; C A Maher
Journal:  Ann Oncol       Date:  2017-12-01       Impact factor: 32.976

3.  Identification of CARS-ALK fusion in primary and metastatic lesions of an inflammatory myofibroblastic tumor.

Authors:  Larisa V Debelenko; Diane C Arthur; Svetlana D Pack; Lee J Helman; David S Schrump; Maria Tsokos
Journal:  Lab Invest       Date:  2003-09       Impact factor: 5.662

4.  Inflammatory myofibroblastic tumor and low-grade myofibroblastic sarcoma: a comparative study of clinicopathologic features and further observations on the immunohistochemical profile of myofibroblasts.

Authors:  Xiaofei Qiu; Elizabeth Montgomery; Baocun Sun
Journal:  Hum Pathol       Date:  2008-04-08       Impact factor: 3.466

5.  Identification of the transforming EML4-ALK fusion gene in non-small-cell lung cancer.

Authors:  Manabu Soda; Young Lim Choi; Munehiro Enomoto; Shuji Takada; Yoshihiro Yamashita; Shunpei Ishikawa; Shin-ichiro Fujiwara; Hideki Watanabe; Kentaro Kurashina; Hisashi Hatanaka; Masashi Bando; Shoji Ohno; Yuichi Ishikawa; Hiroyuki Aburatani; Toshiro Niki; Yasunori Sohara; Yukihiko Sugiyama; Hiroyuki Mano
Journal:  Nature       Date:  2007-07-11       Impact factor: 49.962

6.  Control-FREEC: a tool for assessing copy number and allelic content using next-generation sequencing data.

Authors:  Valentina Boeva; Tatiana Popova; Kevin Bleakley; Pierre Chiche; Julie Cappo; Gudrun Schleiermacher; Isabelle Janoueix-Lerosey; Olivier Delattre; Emmanuel Barillot
Journal:  Bioinformatics       Date:  2011-12-06       Impact factor: 6.937

7.  GeneFuse: detection and visualization of target gene fusions from DNA sequencing data.

Authors:  Shifu Chen; Ming Liu; Tanxiao Huang; Wenting Liao; Mingyan Xu; Jia Gu
Journal:  Int J Biol Sci       Date:  2018-05-22       Impact factor: 6.580

8.  Pan-cancer whole-genome analyses of metastatic solid tumours.

Authors:  Peter Priestley; Jonathan Baber; Martijn P Lolkema; Neeltje Steeghs; Ewart de Bruijn; Charles Shale; Korneel Duyvesteyn; Susan Haidari; Arne van Hoeck; Wendy Onstenk; Paul Roepman; Mircea Voda; Haiko J Bloemendal; Vivianne C G Tjan-Heijnen; Carla M L van Herpen; Mariette Labots; Petronella O Witteveen; Egbert F Smit; Stefan Sleijfer; Emile E Voest; Edwin Cuppen
Journal:  Nature       Date:  2019-10-23       Impact factor: 49.962

9.  Fast and accurate short read alignment with Burrows-Wheeler transform.

Authors:  Heng Li; Richard Durbin
Journal:  Bioinformatics       Date:  2009-05-18       Impact factor: 6.937

10.  The COSMIC (Catalogue of Somatic Mutations in Cancer) database and website.

Authors:  S Bamford; E Dawson; S Forbes; J Clements; R Pettett; A Dogan; A Flanagan; J Teague; P A Futreal; M R Stratton; R Wooster
Journal:  Br J Cancer       Date:  2004-07-19       Impact factor: 7.640

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  1 in total

1.  Synchronous lung and multiple soft tissue metastases developed from osteosarcoma of tibia: a rare case report and genetic profile analysis.

Authors:  Chuanxi Zheng; Yitian Wang; Yi Luo; Zongguo Pang; Yong Zhou; Li Min; Chongqi Tu
Journal:  BMC Musculoskelet Disord       Date:  2022-01-20       Impact factor: 2.362

  1 in total

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