Literature DB >> 32991152

Synthetic, Mechanistic, and Biological Interrogation of Ginkgo biloba Chemical Space En Route to (-)-Bilobalide.

Robert M Demoret1, Meghan A Baker1, Masaki Ohtawa1, Shuming Chen2, Ching Ching Lam2, Sophia Khom3, Marisa Roberto3, Stefano Forli4, Kendall N Houk2, Ryan A Shenvi1.   

Abstract

Here we interrogate the structurally dense (1.64 mcbits/Å3) GABAA receptor antagonist bilobalide, intermediates en route to its synthesis, and related mechanistic questions. 13C isotope labeling identifies an unexpected bromine migration en route to an α-selective, catalytic asymmetric Reformatsky reaction, ruling out an asymmetric allylation pathway. Experiment and computation converge on the driving forces behind two surprising observations. First, an oxetane acetal persists in concentrated mineral acid (1.5 M DCl in THF-d8/D2O); its longevity is correlated to destabilizing steric clash between substituents upon ring-opening. Second, a regioselective oxidation of des-hydroxybilobalide is found to rely on lactone acidification through lone-pair delocalization, which leads to extremely rapid intermolecular enolate equilibration. We also establish equivalent effects of (-)-bilobalide and the nonconvulsive sesquiterpene (-)-jiadifenolide on action potential-independent inhibitory currents at GABAergic synapses, using (+)-bilobalide as a negative control. The high information density of bilobalide distinguishes it from other scaffolds and may characterize natural product (NP) space more generally. Therefore, we also include a Python script to quickly (ca. 132 000 molecules/min) calculate information content (Böttcher scores), which may prove helpful to identify important features of NP space.

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Year:  2020        PMID: 32991152      PMCID: PMC7727090          DOI: 10.1021/jacs.0c08231

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  93 in total

1.  Kinetic resolution of homoaldols via catalytic asymmetric transacetalization.

Authors:  Ilija Čorić; Steffen Müller; Benjamin List
Journal:  J Am Chem Soc       Date:  2010-11-18       Impact factor: 15.419

2.  A randomized, double-blind, placebo-controlled trial of two doses of Ginkgo biloba extract in dementia of the Alzheimer's type.

Authors:  Lon S Schneider; Steven T DeKosky; Martin R Farlow; Pierre N Tariot; Robert Hoerr; Meinhard Kieser
Journal:  Curr Alzheimer Res       Date:  2005-12       Impact factor: 3.498

3.  An eight-step gram-scale synthesis of (-)-jiadifenolide.

Authors:  Hai-Hua Lu; Michael D Martinez; Ryan A Shenvi
Journal:  Nat Chem       Date:  2015-06-15       Impact factor: 24.427

4.  Enantioselective Reformatsky reaction of ethyl iododifluoroacetate with ketones.

Authors:  Michal Fornalczyk; Kuldip Singh; Alison M Stuart
Journal:  Org Biomol Chem       Date:  2012-03-15       Impact factor: 3.876

5.  Inhibition of platelet activating factor (PAF)-induced aggregation of human thrombocytes by ginkgolides: considerations on possible bleeding complications after oral intake of Ginkgo biloba extracts.

Authors:  E Koch
Journal:  Phytomedicine       Date:  2005-01       Impact factor: 5.340

6.  Synthesis, Characterization, and Reactivity of an Ethynyl Benziodoxolone (EBX)-Acetonitrile Complex.

Authors:  Masaharu Yudasaka; Daisuke Shimbo; Toshifumi Maruyama; Norihiro Tada; Akichika Itoh
Journal:  Org Lett       Date:  2019-02-01       Impact factor: 6.005

7.  Mn-, Fe-, and Co-Catalyzed Radical Hydrofunctionalizations of Olefins.

Authors:  Steven W M Crossley; Carla Obradors; Ruben M Martinez; Ryan A Shenvi
Journal:  Chem Rev       Date:  2016-07-27       Impact factor: 60.622

Review 8.  Long-term use of standardised Ginkgo biloba extract for the prevention of Alzheimer's disease (GuidAge): a randomised placebo-controlled trial.

Authors:  Bruno Vellas; Nicola Coley; Pierre-Jean Ousset; Gilles Berrut; Jean-François Dartigues; Bruno Dubois; Hélène Grandjean; Florence Pasquier; François Piette; Philippe Robert; Jacques Touchon; Philippe Garnier; Hélène Mathiex-Fortunet; Sandrine Andrieu
Journal:  Lancet Neurol       Date:  2012-09-06       Impact factor: 44.182

9.  Simple, chemoselective, catalytic olefin isomerization.

Authors:  Steven W M Crossley; Francis Barabé; Ryan A Shenvi
Journal:  J Am Chem Soc       Date:  2014-11-20       Impact factor: 15.419

10.  GABAA receptor signalling mechanisms revealed by structural pharmacology.

Authors:  Simonas Masiulis; Rooma Desai; Tomasz Uchański; Itziar Serna Martin; Duncan Laverty; Dimple Karia; Tomas Malinauskas; Jasenko Zivanov; Els Pardon; Abhay Kotecha; Jan Steyaert; Keith W Miller; A Radu Aricescu
Journal:  Nature       Date:  2019-01-02       Impact factor: 49.962

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  5 in total

1.  Synthesis of (-)-Picrotoxinin by Late-Stage Strong Bond Activation.

Authors:  Steven W M Crossley; Guanghu Tong; Michael J Lambrecht; Hannah E Burdge; Ryan A Shenvi
Journal:  J Am Chem Soc       Date:  2020-06-23       Impact factor: 15.419

Review 2.  Chemical syntheses of the salvinorin chemotype of KOR agonist.

Authors:  Sarah J Hill; Aurélien U C M Brion; Ryan A Shenvi
Journal:  Nat Prod Rep       Date:  2020-11-18       Impact factor: 13.423

Review 3.  Change the channel: CysLoop receptor antagonists from nature.

Authors:  Guanghu Tong; Meghan A Baker; Ryan A Shenvi
Journal:  Pest Manag Sci       Date:  2020-11-22       Impact factor: 4.462

4.  Chemical Evolution of Natural Product Structure.

Authors:  Michael Grigalunas; Susanne Brakmann; Herbert Waldmann
Journal:  J Am Chem Soc       Date:  2022-02-21       Impact factor: 15.419

5.  Gingko biloba-inspired lactone prevents osteoarthritis by activating the AMPK-SIRT1 signaling pathway.

Authors:  Zhijian Zhao; Yang Liu; Yingjie Lu; Mingzhuang Hou; Xu Shen; Huilin Yang; Qin Shi; Yijian Zhang; Fan He; Xuesong Zhu
Journal:  Arthritis Res Ther       Date:  2022-08-18       Impact factor: 5.606

  5 in total

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