Literature DB >> 32967524

Epitranscriptomic regulation by m6A RNA methylation in brain development and diseases.

Anil K Chokkalla1,2, Suresh L Mehta2, Raghu Vemuganti1,2,3.   

Abstract

Cellular RNAs are pervasively tagged with diverse chemical moieties, collectively called epitranscriptomic modifications. The methylation of adenosine at N6 position generates N6-methyladenosine (m6A), which is the most abundant and reversible epitranscriptomic modification in mammals. The m6A signaling is mediated by a dedicated set of proteins comprised of writers, erasers, and readers. Contrary to the activation-repression binary view of gene regulation, emerging evidence suggests that the m6A methylation controls multiple aspects of mRNA metabolism, such as splicing, export, stability, translation, and degradation, culminating in the fine-tuning of gene expression. Brain shows the highest abundance of m6A methylation in the body, which is developmentally altered. Within the brain, m6A methylation is biased toward neuronal transcripts and sensitive to neuronal activity. In a healthy brain, m6A maintains several developmental and physiological processes such as neurogenesis, axonal growth, synaptic plasticity, circadian rhythm, cognitive function, and stress response. The m6A imbalance contributes to the pathogenesis of acute and chronic CNS insults, brain cancer, and neuropsychiatric disorders. This review discussed the molecular mechanisms of m6A regulation and its implication in the developmental, physiological, and pathological processes of the brain.

Entities:  

Keywords:  Brain development; N6-methyladenosine; brain physiology; neurological disorders; post-transcriptional regulation

Mesh:

Substances:

Year:  2020        PMID: 32967524      PMCID: PMC7820693          DOI: 10.1177/0271678X20960033

Source DB:  PubMed          Journal:  J Cereb Blood Flow Metab        ISSN: 0271-678X            Impact factor:   6.200


  147 in total

1.  TET3 regulates DNA hydroxymethylation of neuroprotective genes following focal ischemia.

Authors:  Kahlilia C Morris-Blanco; Anil K Chokkalla; Mario J Bertogliat; Raghu Vemuganti
Journal:  J Cereb Blood Flow Metab       Date:  2020-05-07       Impact factor: 6.200

2.  Epitranscriptomic mechanisms of N6-methyladenosine methylation regulating mammalian hypertension development by determined spontaneously hypertensive rats pericytes.

Authors:  Qingbin Wu; Xiaochen Yuan; Ruiqin Han; Honggang Zhang; Ruijuan Xiu
Journal:  Epigenomics       Date:  2019-07-30       Impact factor: 4.778

Review 3.  FTO, m6 Am , and the hypothesis of reversible epitranscriptomic mRNA modifications.

Authors:  Jan Mauer; Samie R Jaffrey
Journal:  FEBS Lett       Date:  2018-05-24       Impact factor: 4.124

4.  N6-methyladenosine RNA modification regulates embryonic neural stem cell self-renewal through histone modifications.

Authors:  Yang Wang; Yue Li; Minghui Yue; Jun Wang; Sandeep Kumar; Robert J Wechsler-Reya; Zhaolei Zhang; Yuya Ogawa; Manolis Kellis; Gregg Duester; Jing Crystal Zhao
Journal:  Nat Neurosci       Date:  2018-01-15       Impact factor: 24.884

5.  m6A mRNA Methylation Is Essential for Oligodendrocyte Maturation and CNS Myelination.

Authors:  Huan Xu; Yulia Dzhashiashvili; Ankeeta Shah; Rejani B Kunjamma; Yi-Lan Weng; Benayahu Elbaz; Qili Fei; Joshua S Jones; Yang I Li; Xiaoxi Zhuang; Guo-Li Ming; Chuan He; Brian Popko
Journal:  Neuron       Date:  2019-12-31       Impact factor: 17.173

6.  Single-nucleotide-resolution mapping of m6A and m6Am throughout the transcriptome.

Authors:  Bastian Linder; Anya V Grozhik; Anthony O Olarerin-George; Cem Meydan; Christopher E Mason; Samie R Jaffrey
Journal:  Nat Methods       Date:  2015-06-29       Impact factor: 28.547

7.  N6-methyladenosine methyltransferase METTL3 affects the phenotype of cerebral arteriovenous malformation via modulating Notch signaling pathway.

Authors:  Lin-Jian Wang; Yimeng Xue; Ran Huo; Zihan Yan; Hongyuan Xu; Hao Li; Jia Wang; Qian Zhang; Yong Cao; Ji-Zong Zhao
Journal:  J Biomed Sci       Date:  2020-05-09       Impact factor: 8.410

8.  Genetic variants in the Fat and Obesity Associated (FTO) gene and risk of Alzheimer's disease.

Authors:  Christiane Reitz; Giuseppe Tosto; Richard Mayeux; Jose A Luchsinger
Journal:  PLoS One       Date:  2012-12-12       Impact factor: 3.240

9.  Wilms' tumour 1-associating protein inhibits endothelial cell angiogenesis by m6A-dependent epigenetic silencing of desmoplakin in brain arteriovenous malformation.

Authors:  Lin-Jian Wang; Yimeng Xue; Hao Li; Ran Huo; Zihan Yan; Jie Wang; Hongyuan Xu; Jia Wang; Yong Cao; Ji-Zong Zhao
Journal:  J Cell Mol Med       Date:  2020-04-13       Impact factor: 5.310

10.  DART-seq: an antibody-free method for global m6A detection.

Authors:  Kate D Meyer
Journal:  Nat Methods       Date:  2019-09-23       Impact factor: 28.547

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  18 in total

1.  Dysregulation of the Epitranscriptomic Mark m1A in Ischemic Stroke.

Authors:  Anil K Chokkalla; Kinga Pajdzik; Xiaoyang Dou; Qing Dai; Suresh L Mehta; Vijay Arruri; Raghu Vemuganti
Journal:  Transl Stroke Res       Date:  2022-06-23       Impact factor: 6.829

Review 2.  N6-methyladenosine and Neurological Diseases.

Authors:  Nan Zhang; Chunhong Ding; Yuxin Zuo; Yu Peng; Lielian Zuo
Journal:  Mol Neurobiol       Date:  2022-01-15       Impact factor: 5.590

Review 3.  The Critical Role of RNA m6A Methylation in Gliomas: Targeting the Hallmarks of Cancer.

Authors:  Zhouhan Xu; Jun Jiang; Shun Wang
Journal:  Cell Mol Neurobiol       Date:  2022-09-15       Impact factor: 4.231

4.  Constant light exposure in early life induces m6A-mediated inhibition of IGF gene family in the chicken.

Authors:  Yang Yang; Peirong Xu; Jie Liu; Mindie Zhao; Wei Cong; Wanwan Han; Deyun Wang; Ruqian Zhao
Journal:  J Anim Sci       Date:  2022-07-01       Impact factor: 3.338

Review 5.  Epitranscriptomic Modifications Modulate Normal and Pathological Functions in CNS.

Authors:  Anil K Chokkalla; Suresh L Mehta; Raghu Vemuganti
Journal:  Transl Stroke Res       Date:  2021-07-05       Impact factor: 6.829

Review 6.  The m6A epitranscriptome on neural development and degeneration.

Authors:  Ya-Ping Yen; Jun-An Chen
Journal:  J Biomed Sci       Date:  2021-05-27       Impact factor: 8.410

Review 7.  A mark of disease: how mRNA modifications shape genetic and acquired pathologies.

Authors:  Eliana Destefanis; Gülben Avşar; Paula Groza; Antonia Romitelli; Serena Torrini; Pınar Pir; Silvestro G Conticello; Francesca Aguilo; Erik Dassi
Journal:  RNA       Date:  2020-12-29       Impact factor: 4.942

Review 8.  Noncoding RNA crosstalk in brain health and diseases.

Authors:  Suresh L Mehta; Anil K Chokkalla; Raghu Vemuganti
Journal:  Neurochem Int       Date:  2021-07-16       Impact factor: 4.297

Review 9.  Emerging Role of m6 A Methylome in Brain Development: Implications for Neurological Disorders and Potential Treatment.

Authors:  Godwin Sokpor; Yuanbin Xie; Huu P Nguyen; Tran Tuoc
Journal:  Front Cell Dev Biol       Date:  2021-05-19

10.  The potential roles of m6A modification in regulating the inflammatory response in microglia.

Authors:  Qi Li; Shaohong Wen; Weizhen Ye; Shunying Zhao; Xiangrong Liu
Journal:  J Neuroinflammation       Date:  2021-07-05       Impact factor: 8.322

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