Literature DB >> 32964370

Rice-specific Argonaute 17 controls reproductive growth and yield-associated phenotypes.

Kannan Pachamuthu1, Chenna Swetha1, Debjani Basu1, Soumita Das1, Indira Singh1, Vivek Hari Sundar1, T N Sujith1, Padubidri V Shivaprasad2.   

Abstract

KEY MESSAGE: This manuscript describes the functions of an Argonaute protein named AGO17 in rice. AGO17 is required for the development of rice reproductive tissues. Argonaute (AGO) proteins are a well-conserved multigene family of regulators mediating gene silencing across eukaryotes. Monocot plants have additional members of AGO, the functions of which are poorly understood. Among the non-dicot AGO1 clade members in monocots, AGO17 expresses highly in reproductive tissues. Here we show that overexpression of Oryza sativa indica AGO17 in rice resulted in robust growth and increased yield, whereas its silencing resulted in reduced panicle length, less fertility, and poor growth. Small (s)RNA transcriptome analysis revealed misregulation of several miRNAs and other categories of sRNAs in silenced and overexpression lines, in agreement with its likely competition with other AGO1 clade members. Targets of differentially expressed miRNAs included previously unreported target RNAs coding for proteins involved in development, phase transition, and transport. Our results indicate a distinctive role for OsAGO17 in rice reproductive development that could be harnessed to improve yield.

Entities:  

Keywords:  Argonaute; Development; Gene silencing; Rice; miRNA; siRNA

Mesh:

Substances:

Year:  2020        PMID: 32964370     DOI: 10.1007/s11103-020-01071-2

Source DB:  PubMed          Journal:  Plant Mol Biol        ISSN: 0167-4412            Impact factor:   4.076


  50 in total

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3.  microRNA-directed phasing during trans-acting siRNA biogenesis in plants.

Authors:  Edwards Allen; Zhixin Xie; Adam M Gustafson; James C Carrington
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Review 4.  Evolution and functional diversification of MIRNA genes.

Authors:  Josh T Cuperus; Noah Fahlgren; James C Carrington
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Review 5.  Classification and comparison of small RNAs from plants.

Authors:  Michael J Axtell
Journal:  Annu Rev Plant Biol       Date:  2013-01-16       Impact factor: 26.379

6.  ShortStack: comprehensive annotation and quantification of small RNA genes.

Authors:  Michael J Axtell
Journal:  RNA       Date:  2013-04-22       Impact factor: 4.942

Review 7.  The diversity, biogenesis, and activities of endogenous silencing small RNAs in Arabidopsis.

Authors:  Nicolas G Bologna; Olivier Voinnet
Journal:  Annu Rev Plant Biol       Date:  2014-02-26       Impact factor: 26.379

8.  Loss of function of Oryza sativa Argonaute 18 induces male sterility and reduction in phased small RNAs.

Authors:  Soumita Das; Chenna Swetha; Kannan Pachamuthu; Ashwin Nair; P V Shivaprasad
Journal:  Plant Reprod       Date:  2020-03-10       Impact factor: 3.767

Review 9.  The expanding world of small RNAs in plants.

Authors:  Filipe Borges; Robert A Martienssen
Journal:  Nat Rev Mol Cell Biol       Date:  2015-11-04       Impact factor: 94.444

Review 10.  Small RNAs and their roles in plant development.

Authors:  Xuemei Chen
Journal:  Annu Rev Cell Dev Biol       Date:  2009       Impact factor: 13.827

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  2 in total

1.  Essential role of γ-clade RNA-dependent RNA polymerases in rice development and yield-related traits is linked to their atypical polymerase activities regulating specific genomic regions.

Authors:  Vikram Jha; Anushree Narjala; Debjani Basu; Sujith T N; Kannan Pachamuthu; Swetha Chenna; Ashwin Nair; Padubidri V Shivaprasad
Journal:  New Phytol       Date:  2021-09-16       Impact factor: 10.323

2.  Integrated microRNA and transcriptome profiling reveal key miRNA-mRNA interaction pairs associated with seed development in Tartary buckwheat (Fagopyrum tataricum).

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Journal:  BMC Plant Biol       Date:  2021-03-09       Impact factor: 4.215

  2 in total

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