Literature DB >> 32157461

Loss of function of Oryza sativa Argonaute 18 induces male sterility and reduction in phased small RNAs.

Soumita Das1, Chenna Swetha1, Kannan Pachamuthu1, Ashwin Nair1, P V Shivaprasad2.   

Abstract

KEY MESSAGE: In this manuscript, we show that Oryza sativa indica Argonaute protein AGO18 is required for male gametophyte development likely to through a small RNA-mediated mechanism. Monocots have evolved unique gene silencing pathways due to the presence of unique members of Dicer-like and Argonaute (AGO) family members. Among the monocot AGO homologs, AGO18 occupies a unique position. Previous reports have implicated this protein in viral resistance as well as in gametogenesis, likely through its competition with AGO1 clade members for micro(mi)RNAs and other small (s)RNAs. Although expression of rice AGO18 in specific stages of male gametogenesis has been documented, its major functions in plant development remain poorly understood. Here, we show that Oryza sativa indica AGO18 is involved in male gametophyte development. Knockdown (KD) of AGO18 in transgenic rice lines resulted in stunted plants that are male sterile, whereas their carpels were functional. Transcriptome analysis revealed downregulation of several pollen development-associated genes in KD lines. sRNA sequencing in vegetative and reproductive tissues of KD lines indicated reduction of miRNAs and phased secondary sRNAs implicated in male gametophyte development. Our results indicate a distinct role for rice AGO18 in male fertility.

Entities:  

Keywords:  Argonaute; Male sterility; Rice; Silencing; miRNA; phasiRNA; siRNA

Mesh:

Substances:

Year:  2020        PMID: 32157461     DOI: 10.1007/s00497-020-00386-w

Source DB:  PubMed          Journal:  Plant Reprod        ISSN: 2194-7953            Impact factor:   3.767


  76 in total

1.  Two AP2 family genes, supernumerary bract (SNB) and Osindeterminate spikelet 1 (OsIDS1), synergistically control inflorescence architecture and floral meristem establishment in rice.

Authors:  Dong-Yeon Lee; Gynheung An
Journal:  Plant J       Date:  2011-11-08       Impact factor: 6.417

2.  A toolkit for analysing large-scale plant small RNA datasets.

Authors:  Simon Moxon; Frank Schwach; Tamas Dalmay; Dan Maclean; David J Studholme; Vincent Moulton
Journal:  Bioinformatics       Date:  2008-08-19       Impact factor: 6.937

Review 3.  Evolution, functions, and mysteries of plant ARGONAUTE proteins.

Authors:  Han Zhang; Rui Xia; Blake C Meyers; Virginia Walbot
Journal:  Curr Opin Plant Biol       Date:  2015-07-17       Impact factor: 7.834

4.  ShortStack: comprehensive annotation and quantification of small RNA genes.

Authors:  Michael J Axtell
Journal:  RNA       Date:  2013-04-22       Impact factor: 4.942

5.  Rice germline-specific Argonaute MEL1 protein binds to phasiRNAs generated from more than 700 lincRNAs.

Authors:  Reina Komiya; Hajime Ohyanagi; Mitsuru Niihama; Toshiaki Watanabe; Mutsuko Nakano; Nori Kurata; Ken-Ichi Nonomura
Journal:  Plant J       Date:  2014-04-15       Impact factor: 6.417

6.  Regulation of AUXIN RESPONSE FACTOR3 by TAS3 ta-siRNA affects developmental timing and patterning in Arabidopsis.

Authors:  Noah Fahlgren; Taiowa A Montgomery; Miya D Howell; Edwards Allen; Sarah K Dvorak; Amanda L Alexander; James C Carrington
Journal:  Curr Biol       Date:  2006-05-09       Impact factor: 10.834

7.  The Arabidopsis Mediator CDK8 module genes CCT (MED12) and GCT (MED13) are global regulators of developmental phase transitions.

Authors:  C Stewart Gillmor; Claudia O Silva-Ortega; Matthew R Willmann; Manuel Buendía-Monreal; R Scott Poethig
Journal:  Development       Date:  2014-11-05       Impact factor: 6.868

8.  Distinctive expression patterns and roles of the miRNA393/TIR1 homolog module in regulating flag leaf inclination and primary and crown root growth in rice (Oryza sativa).

Authors:  Hongwu Bian; Yakun Xie; Fu Guo; Ning Han; Shengyun Ma; Zhanghui Zeng; Junhui Wang; Yinong Yang; Muyuan Zhu
Journal:  New Phytol       Date:  2012-07-27       Impact factor: 10.151

9.  Regulatory Role of a Receptor-Like Kinase in Specifying Anther Cell Identity.

Authors:  Li Yang; Xiaoling Qian; Mingjiao Chen; Qili Fei; Blake C Meyers; Wanqi Liang; Dabing Zhang
Journal:  Plant Physiol       Date:  2016-05-20       Impact factor: 8.340

Review 10.  Biogenesis and function of rice small RNAs from non-coding RNA precursors.

Authors:  Siwaret Arikit; Jixian Zhai; Blake C Meyers
Journal:  Curr Opin Plant Biol       Date:  2013-03-01       Impact factor: 7.834

View more
  6 in total

1.  A transposon surveillance mechanism that safeguards plant male fertility during stress.

Authors:  Yang-Seok Lee; Robert Maple; Julius Dürr; Alexander Dawson; Saleh Tamim; Charo Del Genio; Ranjith Papareddy; Anding Luo; Jonathan C Lamb; Stefano Amantia; Anne W Sylvester; James A Birchler; Blake C Meyers; Michael D Nodine; Jacques Rouster; Jose Gutierrez-Marcos
Journal:  Nat Plants       Date:  2021-01-04       Impact factor: 15.793

2.  Male sterile 28 encodes an ARGONAUTE family protein essential for male fertility in maize.

Authors:  Yunfei Li; Yumin Huang; Lingling Pan; Yue Zhao; Wei Huang; Weiwei Jin
Journal:  Chromosome Res       Date:  2021-03-02       Impact factor: 5.239

3.  Essential role of γ-clade RNA-dependent RNA polymerases in rice development and yield-related traits is linked to their atypical polymerase activities regulating specific genomic regions.

Authors:  Vikram Jha; Anushree Narjala; Debjani Basu; Sujith T N; Kannan Pachamuthu; Swetha Chenna; Ashwin Nair; Padubidri V Shivaprasad
Journal:  New Phytol       Date:  2021-09-16       Impact factor: 10.323

4.  Degradome comparison between wild and cultivated rice identifies differential targeting by miRNAs.

Authors:  Chenna Swetha; Anushree Narjala; Awadhesh Pandit; Varsha Tirumalai; P V Shivaprasad
Journal:  BMC Genomics       Date:  2022-01-14       Impact factor: 3.969

Review 5.  Mechanisms of MicroRNA Biogenesis and Stability Control in Plants.

Authors:  Lu Zhang; Yu Xiang; Shengbo Chen; Min Shi; Xianda Jiang; Zhuoli He; Shuai Gao
Journal:  Front Plant Sci       Date:  2022-03-08       Impact factor: 5.753

6.  Rice-specific Argonaute 17 controls reproductive growth and yield-associated phenotypes.

Authors:  Kannan Pachamuthu; Chenna Swetha; Debjani Basu; Soumita Das; Indira Singh; Vivek Hari Sundar; T N Sujith; Padubidri V Shivaprasad
Journal:  Plant Mol Biol       Date:  2020-09-22       Impact factor: 4.076

  6 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.