| Literature DB >> 32959765 |
Hayley R Ashbaugh1, June M Early2,1, Myles E Johnson2,1, Mark P Simons3, Paul C F Graf4, Mark S Riddle5, Brett E Swierczewski6.
Abstract
U.S. military personnel must be ready to deploy to locations worldwide, including environments with heightened risk of infectious disease. Diarrheal illnesses continue to be among the most significant infectious disease threats to operational capability. To better prevent, detect, and respond to these threats and improve synchronization across the Department of Defense (DoD) overseas laboratory network, a multisite Global Travelers' Diarrhea protocol was implemented with standardized case definitions and harmonized laboratory methods to identify enteric pathogens. Harmonized laboratory procedures for detection of Norovirus (NoV), enterotoxigenic Escherichia coli (ETEC), enteroaggregative E. coli, Shiga toxin-producing E. coli, enteropathogenic E. coli, Salmonella enterica, Shigella/enteroinvasive E. coli, and Campylobacter jejuni have been implemented at six DoD laboratories with surveillance sites in Egypt, Honduras, Peru, Nepal, Thailand, and Kenya. Samples from individuals traveling from wealthy to poorer countries were collected between June 2012 and May 2018, and of samples with all variables of interest available (n = 410), most participants enrolled were students (46%), tourists (26%), U.S. military personnel (13%), or other unspecified travelers (11%). One or more pathogens were detected in 59% of samples tested. Of samples tested, the most commonly detected pathogens were NoV (24%), ETEC (16%), and C. jejuni (14%), suggesting that NoV plays a larger role in travelers' diarrhea than has previously been described. Harmonized data collection and methods will ensure identification and characterization of enteric pathogens are consistent across the DoD laboratory network, ultimately resulting in more comparable data for global assessments, preventive measures, and treatment recommendations.Entities:
Mesh:
Year: 2020 PMID: 32959765 PMCID: PMC7646805 DOI: 10.4269/ajtmh.20-0053
Source DB: PubMed Journal: Am J Trop Med Hyg ISSN: 0002-9637 Impact factor: 2.345
AD/AGE case definitions
| AD | ≥ 3 Loose/liquid stools (grades 3–5*) in the preceding 24 hours or ≥ 2 loose/liquid stools in the preceding 24 hours plus at least ≥ 2 associated gastrointestinal symptoms, including subjective fever/chills, nausea, vomiting, abdominal cramping, abdominal pain, tenesmus, bloating, fecal urgency, or gross blood in stool |
| AGE | ≥ 3 Vomiting episodes in the preceding 24 hours with ≥ 1 additional GI symptoms (e.g., diarrhea, nausea, abdominal cramping, abdominal pain, tenesmus, bloating, or fecal urgency) or ≥ 2 vomiting episode in the preceding 24 hours with ≥ 2 additional GI symptoms (e.g., diarrhea, nausea, abdominal cramping, abdominal pain, tenesmus, bloating, or fecal urgency) |
AD = acute diarrhea; AGE = acute gastroenteritis; GI = gastrointestinal.
* Stool grade: grade 1 = fully formed (normal); grade 2 = soft (normal); grade 3 = thick liquid taking form of container (unformed); grade 4 = opaque watery (unformed); grade 5 = rice water (unformed).
Partner laboratories and participating sites of the Global Travelers’ Diarrhea study
| Country | Participating laboratory | Field site(s) |
|---|---|---|
| Egypt | NAMRU-3 | American University Clinic, E.U. Clinic, U.S. Embassy |
| Honduras | NAMRU-6 | Joint Task Force Bravo, Soto Cano Air Base |
| Kenya | USAMRD-K | British Army Training Unit Kenya, U.S. Embassy |
| Nepal | AFRIMS | CIWEC Clinic, Kathmandu, CIWEC Clinic, Pokhara |
| Peru | NAMRU-6 | Amauta Spanish Language School, U.S. Embassy |
| Thailand | AFRIMS | Travel Medicine Clinic, Phuket |
AFRIMS = Armed Forces Research Institute of Medical Sciences, Bangkok, Thailand; NAMRU-3 = Naval Medical Research Unit-3, Cairo, Egypt; NAMRU-6 = Naval Medical Research Unit-6, Lima, Peru; USAMRD-K = U.S. Army Medical Research Directorate-Kenya, Nairobi, Kenya; CIWEC = Canadian International Water and Energy Consultants.
Figure 1.Global travelers’ diarrhea study standardized culture testing scheme. Some laboratories may have used other agars for isolation of Salmonella, Shigella, and other enteropathogens. In addition, a Campylobacter-selective agar plate was used (not shown). BAP = 5% sheep blood agar plate; MAC = MacConkey agar; XLD = xylose lysine deoxycholate agar.
Figure 2.Global travelers’ diarrhea study standardized molecular testing scheme. CF = colonization factor.
Demographic characteristics among acute diarrhea and acute gastroenteritis cases by geographic region and country
| Variable | Asia | South/Central America | Middle East | Total | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Nepal | Thailand | Honduras | Peru | Egypt | ||||||||
| % | % | % | % | % | % | |||||||
| Country tested | 165 | 40 | 16 | 4 | 44 | 11 | 171 | 42 | 14 | 3 | 410 | 100 |
| Average age, years (SD) | 30 (12) | – | 38 (15) | – | 33 (8) | – | 27 (11) | – | 32 (8) | – | 29 (11) | – |
| < 0.0001 | ||||||||||||
| Sex | ||||||||||||
| Female | 89 | 54 | 3 | 19 | 9 | 20 | 114 | 67 | 6 | 43 | 221 | 54 |
| Male | 76 | 46 | 13 | 81 | 35 | 80 | 57 | 33 | 8 | 57 | 189 | 46 |
| | < 0.0001 | |||||||||||
| Region of origin | ||||||||||||
| East Asia | 4 | 80 | 0 | 0 | 0 | 0 | 1 | 20 | 0 | 0 | 5 | 1 |
| North America | 40 | 25 | 3 | 2 | 44 | 27 | 69 | 42 | 7 | 4 | 163 | 40 |
| Europe | 102 | 47 | 9 | 4 | 0 | 0 | 98 | 45 | 7 | 3 | 216 | 53 |
| Oceania | 19 | 76 | 4 | 16 | 0 | 0 | 2 | 8 | 0 | 0 | 25 | 6 |
| Middle East | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 100 | 0 | 0 | 1 | 0 |
| Travel type | ||||||||||||
| U.S. military | 1 | 2 | 0 | 0 | 44 | 83 | 2 | 4 | 6 | 11 | 53 | 13 |
| Government (U.S. or non-U.S.) | 4 | 100 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 4 | 1 |
| NGO/aid worker | 15 | 100 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 15 | 4 |
| Tourist | 89 | 85 | 16 | 15 | 0 | 0 | 0 | 0 | 0 | 0 | 105 | 26 |
| Student | 18 | 10 | 0 | 0 | 0 | 0 | 169 | 90 | 0 | 0 | 187 | 46 |
| Other | 38 | 83 | 0 | 0 | 0 | 0 | 0 | 0 | 8 | 17 | 46 | 11 |
Kruskal–Wallis test.
Fisher’s exact test.
Travel type “other” consisted mostly of individuals describing themselves as “volunteers” (66%).
Pathogen results by country and geographic region and country
| Pathogen | Asia-Pacific, | South/Central America, | Middle East, | Total by pathogen, | ||
|---|---|---|---|---|---|---|
| Nepal | Thailand | Honduras | Peru | Egypt | ||
| Positive | 53 (32) | 7 (44) | 9 (20) | 28 (16) | 1 (7) | 98 (24) |
| Genogroup I | 18 (34) | 2 (29) | 2 (22) | 3 (11) | 0 (0) | – |
| Genogroup II | 28 (53) | 5 (71) | 7 (78) | 25 (89) | 1 (100) | – |
| Genogroups I and II | 7 (13) | 0 (0) | 0 (0) | 0 (0) | 0 (0) | – |
| Negative | 112 (68) | 9 (56) | 35 (80) | 143 (84) | 13 (93) | 312 (76) |
| Positive | 30 (18) | 5 (31) | 5 (11) | 16 (9) | 1 (7) | 57 (14) |
| Negative | 135 (82) | 11 (69) | 39 (89) | 155 (91) | 13 (93) | 353 (86) |
| Positive | 16 (10) | 0 (0) | 4 (9) | 16 (9) | 4 (29) | 40 (10) |
| Negative | 149 (90) | 16 (100) | 40 (91) | 155 (91) | 10 (71) | 370 (90) |
| Positive | 3 (2) | 3 (19) | 0 (0) | 0 (0) | 0 (0) | 6 (1) |
| Negative | 162 (98) | 13 (81) | 44 (100) | 171 (100) | 14 (100) | 404 (99) |
| Enteropathogenic | ||||||
| Positive | 16 (10) | 5 (31) | 0 (0) | 10 (6) | 1 (7) | 32 (8) |
| Negative | 149 (90) | 11 (69) | 44 (100) | 161 (94) | 13 (93) | 378 (92) |
| Shiga toxin–producing | ||||||
| Positive | 2 (1) | 0 (0) | 0 (0) | 1 (1) | 0 (0) | 3 (1) |
| Negative | 163 (99) | 16 (100) | 44 (100) | 170 (99) | 14 (100) | 407 (99) |
| Enteroaggregative | ||||||
| Positive | 18 (11) | 1 (6) | 2 (5) | 5 (3) | 1 (7) | 27 (7) |
| Negative | 147 (89) | 15 (94) | 42 (95) | 166 (97) | 13 (93) | 383 (93) |
| Enterotoxigenic | ||||||
| Positive | 35 (21) | 1 (6) | 6 (14) | 16 (9) | 6 (43) | 64 (16) |
| Negative | 130 (79) | 15 (94) | 38 (86) | 155 (91) | 8 (57) | 346 (84) |
| Pathogen combinations | ||||||
| Single pathogen | 74 (45) | 10 (63) | 17 (39) | 69 (40) | 7 (50) | 177 (43) |
| Multiple pathogen | 42 (25) | 5 (31) | 4 (9) | 10 (6) | 3 (21) | 64 (16) |
| None detected | 49 (30) | 1 (6) | 23 (52) | 92 (54) | 4 (29) | 169 (41) |
E. coli = Escherichia coli.
Limited to observations with all pathogen reports of “0”; “missing,” or “pending” observations were excluded.
Figure 3.No pathogen detected, single-, and multiple-pathogen infections by traveler type.
Figure 4.Most frequent pathogen combinations out of multiple pathogen infections by site (not all multiple pathogen infections are listed for each country).