| Literature DB >> 32937765 |
Ana Luiza Dallora1, Leandro Minku2, Emilia Mendes3, Mikael Rennemark4, Peter Anderberg1, Johan Sanmartin Berglund1.
Abstract
Dementia is a neurodegenerative disorder that affects the older adult population. To date, no cure or treatment to change its course is available. Since changes in the brains of affected individuals could be evidenced as early as 10 years before the onset of symptoms, prognosis research should consider this time frame. This study investigates a broad decision tree multifactorial approach for the prediction of dementia, considering 75 variables regarding demographic, social, lifestyle, medical history, biochemical tests, physical examination, psychological assessment and health instruments. Previous work on dementia prognoses with machine learning did not consider a broad range of factors in a large time frame. The proposed approach investigated predictive factors for dementia and possible prognostic subgroups. This study used data from the ongoing multipurpose Swedish National Study on Aging and Care, consisting of 726 subjects (91 presented dementia diagnosis in 10 years). The proposed approach achieved an AUC of 0.745 and Recall of 0.722 for the 10-year prognosis of dementia. Most of the variables selected by the tree are related to modifiable risk factors; physical strength was important across all ages. Also, there was a lack of variables related to health instruments routinely used for the dementia diagnosis.Entities:
Keywords: cost sensitive learning; decision tree; dementia; machine learning; modifiable risk factors; prognosis; wrapper feature selection
Year: 2020 PMID: 32937765 PMCID: PMC7557767 DOI: 10.3390/ijerph17186674
Source DB: PubMed Journal: Int J Environ Res Public Health ISSN: 1660-4601 Impact factor: 3.390
Demographics of the study sample.
| Age at Baseline | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Diagnosis | Gender | 60 | 66 | 72 | 78 | 81 | 84 | 87 | 90+ | Total |
| No dementia at 10 years mark | Male | 81 | 72 | 47 | 36 | 27 | 19 | 2 | 0 | 284 |
| Female | 81 | 92 | 67 | 38 | 35 | 27 | 7 | 4 | 351 | |
| Dementia at 10 years mark | Male | 1 | 3 | 3 | 5 | 8 | 7 | 2 | 0 | 29 |
| Female | 1 | 3 | 7 | 12 | 11 | 15 | 12 | 1 | 62 | |
| Total | 164 | 170 | 124 | 91 | 81 | 68 | 23 | 5 | 726 | |
List of input variables that were selected by dementia specialists.
| Variable Type | Variables |
|---|---|
| Demographic | Age, Gender, |
| Social | Education, Holds a Religious Belief or not, Participation in Religious Activities, Voluntary Association, Social Network, Support Network, Loneliness |
| Lifestyle | Light Exercise, Alcohol Consumption, Alcohol Quantity, Working State at 65 years, Physical Workload, Present Smoker, Past Smoker, Number of Cigarettes a Day, Social Activities, Physically Demanding Activities, Leisure Activities |
| Medical History | Number of Medications, Family History of Importance, Myocardial Infarction, Arrhythmia, Heart Failure, Stroke, TIA/RIND, Diabetes Type 1, Diabetes Type 2, Thyroid Disease, Cancer, Epilepsy, Atrial Fibrillation, Cardiovascular Ischemia, Parkinson’s Disease, Depression, Other Psychiatric Diseases, Snoring, Sleep Apnea, Hip Fracture, Head Trauma, Developmental Disabilities, High Blood Pressure |
| Biochemical Test | Hemoglobin Analysis, C-Reactive Protein Analysis |
| Physical Examination | Body Mass Index (BMI), Pain in the last 4 weeks, Heart Rate Sitting, Heart Rate Lying, Blood Pressure on the Right Arm, Hand Strength in Right Arm in a 10s Interval, Hand Strength in Left Arm in a 10s Interval, Feeling of Safety from Rising from a Chair, Assessment of Rising from a Chair, Single-Leg Standing with Right Leg, Single Leg Standing with Left Leg, Dental Prosthesis, Number of Teeth |
| Psychological | Memory Loss, Memory Decline, Memory Decline 2, Abstract Thinking, Personality Change, Sense of Identity |
| Health Instruments | Sense of Coherence [ |
Figure 1Overview of the proposed approach.
Performance results in each of the 5-outer cross-validation test sets.
| Test Set | AUC | Accuracy | Recall | Precision |
|---|---|---|---|---|
| 1 | 0.718 | 0.664 | 0.790 | 0.250 |
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| 3 | 0.827 | 0.738 | 0.944 | 0.315 |
| 4 | 0.763 | 0.752 | 0.778 | 0.304 |
| 5 | 0.712 | 0.662 | 0.778 | 0.237 |
The test set with the median results, with regard to the AUC, is shown in bold.
Figure 2Resulting decision tree model for the prediction of dementia in 10 years. Throughout the decision tree, the left branches refer to ‘yes’ with regard to the rule of the node, and the right branches refer to ‘no’.
Description and possible values of the variables identified by the proposed decision tree approach.
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| Single leg standing test with left leg | Single leg standing test with left leg. One leg standing test to measure the time the subject can stand on the left leg without support [ | Numeric (seconds) |
| Past smoking (cigarettes/day) | Cigarettes/day, on average, before quitting smoking. | Numeric |
| Diabetes Type 2 | Medical history of the subject of diabetes Type 2 | Yes |
| Alcohol Consumption | Alcohol consumption frequency | Never |
| Number of Medications | Number of medications taken regularly by the subject | Numeric |
| Right hand strength | The subject’s hand strength, measured by the computerized dynamometer Grippit in an interval of 10 s, for the right hand. | Numeric (Newtons) |
| Left hand strength | The subject’s hand strength, measured by the computerized dynamometer Grippit in an interval of 10 s, for the left hand. | Numeric (Newtons) |
| Body mass index | Subject’s BMI | Numeric (kg/m2) |
| Backwards Digit Span Test score | The number of correct sequences on the Backwards digit span test [ | Numeric |
| Present smoking frequency | Subject’s habit of smoking at baseline. | No, never smoked |