Literature DB >> 32936478

MRI-cytometry: Mapping nonparametric cell size distributions using diffusion MRI.

Junzhong Xu1,2,3,4, Xiaoyu Jiang1,2, Sean P Devan1, Lori R Arlinghaus1, Eliot T McKinley5, Jingping Xie1, Zhongliang Zu1,2, Qing Wang6, A Bapsi Chakravarthy7, Yong Wang8, John C Gore1,2,3,4.   

Abstract

PURPOSE: This report introduces and validates a new diffusion MRI-based method, termed MRI-cytometry, which can noninvasively map intravoxel, nonparametric cell size distributions in tissues.
METHODS: MRI was used to acquire diffusion MRI signals with a range of diffusion times and gradient factors, and a model was fit to these data to derive estimates of cell size distributions. We implemented a 2-step fitting method to avoid noise-induced artificial peaks and provide reliable estimates of tumor cell size distributions. Computer simulations in silico, experimental measurements on cultured cells in vitro, and animal xenografts in vivo were used to validate the accuracy and precision of the method. Tumors in 7 patients with breast cancer were also imaged and analyzed using this MRI-cytometry approach on a clinical 3 Tesla MRI scanner.
RESULTS: Simulations and experimental results confirm that MRI-cytometry can reliably map intravoxel, nonparametric cell size distributions and has the potential to discriminate smaller and larger cells. The application in breast cancer patients demonstrates the feasibility of direct translation of MRI-cytometry to clinical applications.
CONCLUSION: The proposed MRI-cytometry method can characterize nonparametric cell size distributions in human tumors, which potentially provides a practical imaging approach to derive specific histopathological information on biological tissues.
© 2020 International Society for Magnetic Resonance in Medicine.

Entities:  

Keywords:  MRI; cell size; cytometry; diffusion; distribution; oscillating gradient; volume fraction

Mesh:

Year:  2020        PMID: 32936478      PMCID: PMC7722100          DOI: 10.1002/mrm.28454

Source DB:  PubMed          Journal:  Magn Reson Med        ISSN: 0740-3194            Impact factor:   4.668


  37 in total

1.  A global optimisation method for robust affine registration of brain images.

Authors:  M Jenkinson; S Smith
Journal:  Med Image Anal       Date:  2001-06       Impact factor: 8.545

2.  Statistical model for diffusion attenuated MR signal.

Authors:  Dmitriy A Yablonskiy; G Larry Bretthorst; Joseph J H Ackerman
Journal:  Magn Reson Med       Date:  2003-10       Impact factor: 4.668

3.  Cell size as a link between noncoding DNA and metabolic rate scaling.

Authors:  J Kozłowski; M Konarzewski; A T Gawelczyk
Journal:  Proc Natl Acad Sci U S A       Date:  2003-11-13       Impact factor: 11.205

4.  Orientationally invariant indices of axon diameter and density from diffusion MRI.

Authors:  Daniel C Alexander; Penny L Hubbard; Matt G Hall; Elizabeth A Moore; Maurice Ptito; Geoff J M Parker; Tim B Dyrby
Journal:  Neuroimage       Date:  2010-05-23       Impact factor: 6.556

5.  AxCaliber: a method for measuring axon diameter distribution from diffusion MRI.

Authors:  Yaniv Assaf; Tamar Blumenfeld-Katzir; Yossi Yovel; Peter J Basser
Journal:  Magn Reson Med       Date:  2008-06       Impact factor: 4.668

Review 6.  Cell biology. On being the right (cell) size.

Authors:  Miriam B Ginzberg; Ran Kafri; Marc Kirschner
Journal:  Science       Date:  2015-05-15       Impact factor: 47.728

7.  Single- and double-Diffusion encoding MRI for studying ex vivo apparent axon diameter distribution in spinal cord white matter.

Authors:  Debbie Anaby; Darya Morozov; Inbar Seroussi; Simon Hametner; Nir Sochen; Yoram Cohen
Journal:  NMR Biomed       Date:  2019-10-01       Impact factor: 4.044

8.  Quantitative characterization of tissue microstructure with temporal diffusion spectroscopy.

Authors:  Junzhong Xu; Mark D Does; John C Gore
Journal:  J Magn Reson       Date:  2009-07-03       Impact factor: 2.229

9.  In vivo magnetic resonance imaging of treatment-induced apoptosis.

Authors:  Xiaoyu Jiang; Eliot T McKinley; Jingping Xie; Hua Li; Junzhong Xu; John C Gore
Journal:  Sci Rep       Date:  2019-07-02       Impact factor: 4.379

10.  Early Detection of Treatment-Induced Mitotic Arrest Using Temporal Diffusion Magnetic Resonance Spectroscopy.

Authors:  Xiaoyu Jiang; Hua Li; Ping Zhao; Jingping Xie; Dineo Khabele; Junzhong Xu; John C Gore
Journal:  Neoplasia       Date:  2016-06       Impact factor: 5.715

View more
  4 in total

Review 1.  MR cell size imaging with temporal diffusion spectroscopy.

Authors:  Xiaoyu Jiang; Hua Li; Sean P Devan; John C Gore; Junzhong Xu
Journal:  Magn Reson Imaging       Date:  2020-12-16       Impact factor: 2.546

2.  Test-retest reproducibility of in vivo oscillating gradient and microscopic anisotropy diffusion MRI in mice at 9.4 Tesla.

Authors:  Naila Rahman; Kathy Xu; Mohammad Omer; Matthew D Budde; Arthur Brown; Corey A Baron
Journal:  PLoS One       Date:  2021-11-05       Impact factor: 3.240

3.  Diffusion MRI signal cumulants and hepatocyte microstructure at fixed diffusion time: Insights from simulations, 9.4T imaging, and histology.

Authors:  Francesco Grussu; Kinga Bernatowicz; Irene Casanova-Salas; Natalia Castro; Paolo Nuciforo; Joaquin Mateo; Ignasi Barba; Raquel Perez-Lopez
Journal:  Magn Reson Med       Date:  2022-02-18       Impact factor: 3.737

4.  Multidimensional Diffusion Magnetic Resonance Imaging for Characterization of Tissue Microstructure in Breast Cancer Patients: A Prospective Pilot Study.

Authors:  Isaac Daimiel Naranjo; Alexis Reymbaut; Patrik Brynolfsson; Roberto Lo Gullo; Karin Bryskhe; Daniel Topgaard; Dilip D Giri; Jeffrey S Reiner; Sunitha B Thakur; Katja Pinker-Domenig
Journal:  Cancers (Basel)       Date:  2021-03-31       Impact factor: 6.639

  4 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.