| Literature DB >> 32928309 |
Lei Peng1,2,3, Song Jin1, Jiping Lu3, Chao Ouyang3, Jiang Guo1,2, Zhongyu Xie1,2, Huiyong Shen4,5, Peng Wang6,7.
Abstract
BACKGROUND: A few months ago, the Bioscience Reports journal showed that growth differentiation factor 5 (GDF5) rs143383 genetic polymorphism increases the susceptibility of knee osteoarthritis (KOA), but previous studies' results have debates about available data. Considering the availability of more recent data, we focus on clarifying the relationship of KOA and GDF5 rs143383 genetic polymorphism by a meta-analysis of case-control trial data.Entities:
Keywords: Caucasian; Growth differentiation factor 5, rs143383; Knee osteoarthritis; Polymorphism
Mesh:
Substances:
Year: 2020 PMID: 32928309 PMCID: PMC7488690 DOI: 10.1186/s13075-020-02306-9
Source DB: PubMed Journal: Arthritis Res Ther ISSN: 1478-6354 Impact factor: 5.156
Fig. 1Studies identification diagram (from [13])
Relevant studies concerning relationships between GDF5 rs143383 polymorphisms and knee osteoarthritis
| Author | Year | Country | Ethnicity | Type of disease | Study design | Sample size of case/control | Genotyping methods | HWE among controls | NOS |
|---|---|---|---|---|---|---|---|---|---|
| Elazeem et al. [ | 2017 | Egypt | Caucasian | KOA | Case-control | 50/50 | Taqman | 0.58 | 8 |
| Ozcan et al. [ | 2016 | Turkey | Caucasian | KOA | Case-control | 94/279 | PCR-RFLP | 0.06 | 8 |
| Mishra et al. [ | 2013 | India | Asian | KOA | Case-control | 300/300 | PCR-RFLP | 0.97 | 8 |
| Tawonsawatruk et al. [ | 2011 | Thailand | Asian | KOA | Case-control | 90/103 | PCR-RFLP | 0.63 | 8 |
| Cao et al. [ | 2010 | Korea | Caucasian | KOA | Case-control | 276/298 | PCR-RFLP | 0.34 | 8 |
| Valdes et al.—Nottingham [ | 2009 | UK | Caucasian | KOA | Case-control | 735/654 | Allele-specific PCR | 0.99 | 8 |
| Valdes et al.—Chingford [ | 2009 | UK | Caucasian | KOA | Case-control | 259/509 | Allele-specific PCR | 0.90 | 8 |
| Tsezou et al. [ | 2007 | Greece | Caucasian | KOA | Case-control | 251/268 | Direct sequence | 0.66 | 8 |
| Miyamoto et al.—Japan [ | 2007 | Japan | Asian | KOA | Case-control | 718/861 | Taqman | 0.96 | 8 |
| Miyamoto et al.—China [ | 2007 | China | Asian | KOA | Case-control | 313/485 | Taqman | 0.28 | 8 |
| Southam et al.—UK [ | 2007 | UK | Caucasian | KOA | Case-control | 509/822 | PCR-RFLP | 0.26 | 8 |
| Southam et al.—Spain [ | 2007 | Spain | Caucasian | KOA | Case-control | 274/1196 | Taqman | 0.54 | 8 |
| Shin et al. [ | 2012 | Korea | Asian | KOA | Case-control | 725/1737 | High-resolution melting analysis | 0.17 | 8 |
| Yao et al. [ | 2008 | China | Asian | KOA | Case-control | 313/485 | PCR-RFLP | 0.33 | 8 |
| Vaes et al. [ | 2009 | Netherland | Caucasian | KOA | Case-control | 667/2097 | Taqman | 0.72 | 8 |
| Zhang et al. [ | 2019 | China | Asian | KOA | Case-control | 288/397 | Taqman | 0.56 | 8 |
| García-Alvarado et al. [ | 2018 | Mexico | Caucasian | KOA | Case-control | 145/145 | RT-PCR | 0.89 | 8 |
| Valdes et al.—GOAL [ | 2011 | UK | Caucasian | KOA | Case-control | 867/758 | Allele-specific PCR | 0.83 | 8 |
| Valdes et al.—Hertfordshire [ | 2011 | UK | Caucasian | KOA | Case-control | 1141/536 | Allele-specific PCR | 0.22 | 8 |
| Chapman et al. [ | 2008 | Netherland | Caucasian | KOA | Case-control | 142/724 | Mass spectrometry | 0.55 | 8 |
Meta-analysis for GDF5 rs143383 polymorphisms and knee osteoarthritis risk
| Variables | C vs T | CC+CT vs TT | CC vs CT+TT | CC vs TT | CT vs CC+TT | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| OR (95% CI) | OR (95% CI) | OR (95% CI) | OR (95% CI) | OR (95% CI) | |||||||
| Total | 20 | 0.836 | 1 × 10−4 | 0.80 | 1 × 10−4 | 0.79 | 0.001 | 0.88 | 0.002 | 0.88 | 0.002 |
| (0.76–0.91) | (0.72–0.90) | (0.68–0.92) | (0.80–0.97) | (0.80–0.96) | |||||||
| Ethnicity | |||||||||||
| Asian | 8 | 0.84 | 1 × 10−4 | 0.80 | 1 × 10−4 | 0.76 | 0.002 | 0.85 | 0.011 | 0.85 | 0.011 |
| (0.67–1.02) | (0.63–1.00) | (0.50–1.12) | (0.72–1.00) | (0.72–1.00) | |||||||
| Caucasian | 12 | 0.84 | 0.12 | 0.81 | 1 × 10−4 | 0.81 | 0.92 | 0.90 | 0.013 | 0.89 | 0.016 |
| (0.79–0.91) | (0.71–0.92) | (0.72–0.90) | (0.80–1.02) | (0.79–1.02) | |||||||
N number of studies
Ph value of Q-test for heterogeneity test. Random-effects model was used when p value for heterogeneity test < 0.05; otherwise, fix-effects model was used
Fig. 2Forest of GDF5 genetic polymorphism (C>T) and KOA (CC vs CT+TT)
Fig. 3Forest of GDF5 genetic polymorphism (C>T) and KOA (C vs T)
Fig. 4Funnel plots of the association between GDF5 rs143383 polymorphism and knee osteoarthritis (a allele model, b dominate model, c recessive model, d homozygote model, e heterozygote model)