| Literature DB >> 25467786 |
Feng Pan1, Jing Tian, Tania Winzenberg, Changhai Ding, Graeme Jones.
Abstract
BACKGROUND: Previous studies investigating the association between GDF5 rs143383 polymorphism and knee osteoarthritis (OA) have suggested stronger associations in Asians than Caucasians, but limitations on the amount of available data have meant that a definitive assessment has not been possible. Given the availability of more recent data, the aim of this meta-analysis was to determine the overall association between GDF5 rs143383 polymorphism and knee OA and whether the association varies by ethnicity.Entities:
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Year: 2014 PMID: 25467786 PMCID: PMC4265459 DOI: 10.1186/1471-2474-15-404
Source DB: PubMed Journal: BMC Musculoskelet Disord ISSN: 1471-2474 Impact factor: 2.362
Figure 1Flow diagram of the study selection process. aP: population group; E: exposure; C: control group; O: outcome; S: study design.
Characteristics of individual studies included in meta-analysis
| First author | Year | Country | Study design | Ethnicity | Sample size | Source of controls | Genotyping method | Age (mean) | Knee OA definition | ||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Case | Control | Case | Control | Radiographic* | Clinical† | TKR | |||||||
| Southama | 2007 | UK | Case–control | Caucasian | 349 | 822 | HB | PCR-RFLP | 65 | 69 |
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| Southamb | 2007 | Spain | Case–control | Caucasian | 274 | 1196 | HB | TaqMan | NA | >55.0 |
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| Miyamotoa | 2007 | Japan | Case–control | Asian | 718 | 861 | HB | TaqMan, Invader, DNA fragment analysis or Direct sequence | 71.9 | 49.4 |
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| Miyamotob | 2007 | China | Case–control | Asian | 313 | 485 | HB | TaqMan, Invader, DNA fragment analysis or Direct sequence | 58.8 | 56.8 |
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| Tsezou | 2007 | Greece | Case–control | Caucasian | 251 | 268 | HB | Direct sequence | 67.9 | 65.2 |
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| Chapman | 2008 | Netherlands | Cohort study | Caucasian | 142 | 724 | PB | Mass spectrometry | 60.4 | 59.6 |
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| Valdesa | 2009 | UK | Case–control | Caucasian | 735 | 654 | HB | Allele-specific PCR | 68.5 | 66.9 |
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| Valdesb | 2009 | UK | Cohort study | Caucasian | 264 | 512 | PB | Allele-specific PCR | 66.3 | 63 |
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| Vaes | 2009 | Netherlands | Cohort study | Caucasian | 667 | 2097 | PB | TaqMan | >55.0 | >55.0 |
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| Evangeloua | 2009 | Iceland | Cohort study | Caucasian | 1071 | 1169 | PB | Centaurus platform | 74.8 | 74.8 |
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| Evangeloub | 2009 | UK | Twins study | Caucasian | 177 | 548 | NA | Illumina platform | 54.3 | 54.3 |
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| Evangelouc | 2009 | Finland | Family-based study | Caucasian | 109 | 209 | NA | Mass spectrometry | 67 | 58 |
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| Cao | 2010 | Korea | Case–control | Asian | 276 | 298 | PB | PCR-RFLP | 63 | 44 |
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| Tawonsawatruk | 2011 | Thailand | Case–control | Asian | 103 | 103 | HB | PCR-RFLP | 68.5 | 59.25 |
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| Valdea | 2011 | UK | Cohort study | Caucasian | 867 | 758 | PB | Allele-specific PCR | 66.5 | 66.5 |
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| Valdesb | 2011 | Estonian | Cohort study | Caucasian | 65 | 427 | PB | Allele-specific PCR | 47.1 | 47.1 |
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| Valdesc | 2011 | UK | Cohort study | Caucasian | 1141 | 536 | PB | Allele-specific PCR | 65.5 | 65.5 |
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| Valdesd | 2011 | Netherlands | Cohort study | Caucasian | 162 | 1582 | PB | TaqMan | >45.0 | >45.0 |
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| Shin | 2012 | Korea | Cohort study | Asian | 725 | 1737 | PB | High resolution melting analysis | 67.4 | 62.7 |
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| Mhishra | 2013 | India | Case–control | Asian | 300 | 300 | HB | PCR-RFLP | 54.0 | 55.2 |
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a,b,c and dDenote an independent study in the one article, respectively; NA Data not available; HB hospital-based; PB population-based; PCR-RFLP polymerase chain reaction restriction fragment length polymorphism; TKR total knee replacement.
*Radiographic criteria (Kellgren/Lawrence grade ≥2).
†Clinical criteria are based on the American College of Rheumatology.
Distributions of GDF5 rs143383 genotypes and alleles among cases and controls
| First author | Year | Case | Control | Case | Control |
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|---|---|---|---|---|---|---|---|---|---|---|---|---|
| TT | TC | CC | TT | TC | CC | T | C | T | C | |||
| Southama | 2007 | 141 | 168 | 40 | 324 | 372 | 126 | 450 | 248 | 1020 | 624 | 0.262 |
| Southamb | 2007 | 102 | 136 | 36 | 439 | 563 | 194 | 340 | 208 | 1441 | 951 | 0.550 |
| Miyamotoa | 2007 | 444 | 243 | 31 | 473 | 330 | 58 | 1131 | 305 | 1276 | 446 | 0.966 |
| Miyamotob | 2007 | 197 | 97 | 19 | 244 | 193 | 48 | 491 | 135 | 681 | 289 | 0.283 |
| Tsezou | 2007 | 95 | 126 | 30 | 99 | 125 | 44 | 316 | 186 | 323 | 213 | 0.669 |
| Chapman | 2008 | 54 | 72 | 16 | 289 | 331 | 104 | 180 | 104 | 909 | 539 | 0.558 |
| Valdesa | 2009 | 337 | 313 | 85 | 238 | 329 | 79 | 987 | 483 | 805 | 487 | 0.032 |
| Valdesb | 2009 | 126 | 98 | 35 | 181 | 244 | 84 | 350 | 168 | 606 | 412 | 0.908 |
| Vaes | 2009 | 276 | 298 | 93 | 752 | 1014 | 331 | 850 | 484 | 2518 | 1617 | 0.724 |
| Evangeloua | 2009 | 535 | 379 | 157 | 552 | 442 | 175 | 1449 | 693 | 1546 | 792 | 0.000 |
| Evangeloub | 2009 | NA | NA | NA | NA | NA | NA | 230 | 124 | 679 | 417 | NA |
| Evangelouc | 2009 | NA | NA | NA | NA | NA | NA | 124 | 94 | 251 | 167 | NA |
| Cao | 2010 | 150 | 115 | 11 | 159 | 113 | 26 | 415 | 137 | 431 | 165 | 0.360 |
| Tawonsawatruk | 2011 | 38 | 41 | 11 | 33 | 47 | 23 | 117 | 63 | 113 | 93 | 0.424 |
| Valdesa | 2011 | 413 | 361 | 93 | 294 | 354 | 110 | 1187 | 547 | 942 | 574 | 0.837 |
| Valdesb | 2011 | 32 | 24 | 9 | 168 | 179 | 80 | 88 | 42 | 515 | 339 | 0.010 |
| Valdesc | 2011 | 467 | 511 | 163 | 219 | 237 | 80 | 1445 | 837 | 675 | 397 | 0.229 |
| Valdesd | 2011 | NA | NA | NA | NA | NA | NA | 195 | 107 | 1930 | 1234 | NA |
| Shin | 2012 | 382 | 305 | 38 | 942 | 689 | 106 | 1069 | 381 | 2573 | 901 | 0.176 |
| Mhishra | 2013 | 124 | 130 | 46 | 84 | 160 | 56 | 378 | 222 | 328 | 272 | 0.188 |
a,b,c and dDenote an independent study in the one article, respectively; HWE Hardy-Weinberg equilibrium; NA Data not available.
Meta-analysis of GDF5 rs143383 polymorphism and knee OA
| Population | Comparison (Na) | Test of association | Test of heterogeneity | ||
|---|---|---|---|---|---|
| OR (95% CI) |
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| Overall | C vs. T (20) | 0.85 (0.80-0.90) | 0.000 | 0.019 | 44.1 |
| CC vs. TT (17) | 0.73 (0.66-0.81) | 0.000 | 0.328 | 10.8 | |
| CT vs. TT (17) | 0.84 (0.76-0.94) | 0.002 | 0.000 | 62.2 | |
| CC/CT vs. TT (17) | 0.81 (0.73-0.90) | 0.000 | 0.000 | 61.7 | |
| CC vs. CT/TT (17) | 0.81 (0.74-0.86) | 0.000 | 0.623 | 0.0 | |
| Ethnicity | |||||
| Asian | C vs. T (6) | 0.78 (0.67-0.92) | 0.003 | 0.006 | 69.5 |
| CC vs. TT (6) | 0.60 (0.48-0.76) | 0.000 | 0.333 | 12.9 | |
| CT vs. TT (6) | 0.80 (0.63-1.02) | 0.071 | 0.002 | 74.3 | |
| CC/CT vs. TT (6) | 0.76 (0.60-0.96) | 0.021 | 0.001 | 75.8 | |
| CC vs. CT/TT (6) | 0.68 (0.56-0.84) | 0.000 | 0.494 | 0.0 | |
| Caucasian | C vs. T (14) | 0.87 (0.82-0.92) | 0.000 | 0.229 | 20.7 |
| CC vs. TT (11) | 0.78 (0.70-0.87) | 0.000 | 0.611 | 0.0 | |
| CT vs. TT (11) | 0.86 (0.76-0.97) | 0.012 | 0.011 | 56.2 | |
| CC/CT vs. TT (11) | 0.83 (0.75-0.93) | 0.001 | 0.020 | 52.6 | |
| CC vs. CT/TT (11) | 0.84 (0.76-0.93) | 0.001 | 0.822 | 0.0 | |
| Sex | |||||
| Females | C vs. T (9) | 0.85 (0.78-0.93) | 0.000 | 0.236 | 23.3 |
| CC vs. TT (9) | 0.73 (0.62-0.87) | 0.000 | 0.923 | 0.0 | |
| CT vs. TT (9) | 0.81 (0.69-0.95) | 0.011 | 0.029 | 53.2 | |
| CC/CT vs. TT (9) | 0.80 (0.69-0.93) | 0.003 | 0.039 | 50.7 | |
| CC vs. CT/TT (9) | 0.83 (0.70-0.97) | 0.021 | 0.990 | 0.0 | |
| Males | C vs. T (9) | 0.85 (0.74-0.97) | 0.020 | 0.171 | 30.9 |
| CC vs. TT (9) | 0.65 (0.50-0.84) | 0.001 | 0.464 | 0.0 | |
| CT vs. TT (9) | 0.99 (0.81-1.20) | 0.888 | 0.139 | 34.8 | |
| CC/CT vs. TT (9) | 0.90 (0.74-1.09) | 0.272 | 0.107 | 39.1 | |
| CC vs. CT/TT (9) | 0.66 (0.51-0.84) | 0.001 | 0.613 | 0.0 | |
OR odds ratio, CI confidence interval, aNumber of comparison, b P values for within group differences were determined by Z test, c P P value of Q-test for heterogeneity test.
Figure 2Forest plot of the association of GDF5 rs143383 polymorphism with knee osteoarthritis risk under additive model (C versus T).
Figure 3Forest plots for statistically significant meta-analysis in Asian populations. (A) CC versus TT; (B) CC versus CT/TT.
Figure 4Subgroup analysis by sex for knee osteoarthritis risk associated with GDF5 rs143383 polymorphism under CC versus TT model.
Identifying the source of heterogeneity by control type and knee OA definition
| Subgroup | C vs. T | CC vs. TT | CT vs. TT | CC/CT vs. TT | CC vs. CT/TT | |||||
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| HB | 0.196 | 29.1 | 0.681 | 0.0 | 0.013 | 60.8 | 0.032 | 54.4 | 0.703 | 0.0 |
| PB | 0.051 | 46.6 | 0.233 | 23.7 | 0.006 | 62.9 | 0.005 | 64.0 | 0.511 | 0.0 |
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| Radiographic | 0.043 | 48.3 | 0.654 | 0.0 | 0.003 | 68.1 | 0.002 | 68.9 | 0.874 | 0.0 |
| TKR | 0.206 | 30.5 | 0.132 | 41.0 | 0.187 | 33.3 | 0.184 | 33.6 | 0.153 | 38.0 |
HB hospital-based, PB population-based, TKR total knee replacement, P P value of Q-test for heterogeneity test.
Figure 5Funnel plot and Egger’s publication bias plot for meta-analysis on association between GDF5 rs143383 polymorphism and knee osteoarthritis risk (C versus T). (A) Begg’s funnel plot for meta-analysis; (B) Egger’s linear regression test for publication bias.