| Literature DB >> 32918542 |
Laura Schultz-Rogers1, Ikuo Masuho2, Filippo Pinto E Vairo1,3, Christopher T Schmitz4, Tanya L Schwab4, Karl J Clark4, Lauren Gunderson3, Pavel N Pichurin3, Klaas Wierenga5, Kirill A Martemyanov2, Eric W Klee1,3.
Abstract
BACKGROUND: GNB1 encodes a subunit of a heterotrimeric G-protein complex that transduces intracellular signaling cascades. Disruptions to the gene have previously been shown to be embryonic lethal in knockout mice and to cause complex neurodevelopmental disorders in humans. To date, the majority of variants associated with disease in humans have been missense variants in exons 5-7.Entities:
Mesh:
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Year: 2020 PMID: 32918542 PMCID: PMC7667315 DOI: 10.1002/mgg3.1477
Source DB: PubMed Journal: Mol Genet Genomic Med ISSN: 2324-9269 Impact factor: 2.183
FIGURE 1Variants in GNB1 currently reported in the literature as associated with NDD. (a) Thirty variants are currently associated with neurodevelopmental disorder (NDD) in the literature. Twenty‐six are missense variants (blue) while only four presumed loss of function (LoF) variants (red) have been previously reported. The variants presented in this report are also presumed LoF (purple). Figure generated using https://proteinpaint.stjude.org/. (b) Pedigree for Patient 1. Individuals who were sequenced are indicated with genotype, affected individuals are in black. (c) Pedigree for Patient 2. Sequencing was performed on the parent‐child trio with genotypes indicated and affected individuals in black. GNB1 GenBank reference sequence NM_002074.4.
Primers and sequences.
| Variant primer | Sequence |
|---|---|
| Common insert | |
| Forward (F) | CTAGCGTTTAAACTTAAGCTTGGTAC |
| Reverse (R) | CGCATCCCCAGCATGCCT |
| p.Gly330Valfs*4 | |
| F | ATGGCTGTGGCGACGGTCCTGGGATAGC |
| R | TATCCCAGGACCGTCGCCACAGCCATGC |
| p.Phe234 Thrfs*16 | |
| F | ATCAATGCCATTTGCACGACGCCACCTGCA |
| R | CAGGTGGCGTCGTGCAAATGGCATTGATGT |
GNB1 GenBank reference sequence NM_002074.4.
FIGURE 2RNA sequencing reveals aberrant splicing in GNB1 in Patient 1. (a) Splicing reads from RNA sequencing of whole blood are shown for Patient 1 as well as 6 unrelated, unaffected control patients. No reads skipping exon 10 were detected in the patient, and none of the control samples displayed splicing into alternate cryptic splice sites in exon 10. (b) Aberrant splicing into exon 10 in Patient 1 includes 131 reads splicing 38 base pairs into exon 10 and 8 reads splicing 54 base pairs into exon 10. About 581 reads represent normal splicing from exon 9 to exon 10. GNB1 GenBank reference sequence NM_002074.4.
FIGURE 3Effect of Gβ1 mutations on its function. (a) BRET assay design for monitoring G protein activation. Dopamine stimulation of cells transiently transfected with D2R, GαoA with BRET sensors results in the dissociation of Venus‐Gβγ from the heterotrimer. Released Venus‐Gβγ dimers become available for interaction with the masGRK3ct‐Nluc‐HA reporter, producing the BRET signal. (b) Real‐time monitoring of G protein activation by the dopamine D2 receptor (D2R). HEK293 T/17 cells were transfected with D2R, GαoA, Venus 1‐155‐Gγ2, and masGRK3ct‐Nluc‐HA, together with Venus 156‐239‐Gβ1 (wild type or mutant). Dopamine at 100 µM concentration was applied at time 5 seconds and the BRET signal was followed across time. (c) Functional assessment of two Gβ variants to mediate agonist‐induced signaling. The values of agonist‐induced maximum BRET amplitude were plotted as a bar graph. Mean ± SEM from three independent experiments were shown. (d) Schematic presentation of the BiFC assay to test Gβγ dimer formation. Two non‐fluorescent fragments of Venus fused to Gβ (Venus 156‐239‐Gβ1) and Gγ (Venus 1‐155‐Gγ2) are brought together by interactions between Gβ and Gγ and produces a yellow fluorescent protein, Venus. (e) Quantitative assessment of Gβγ dimer formation of Gβ1 mutants. Venus intensity of transiently transfected HEK293 T/17 cells to perform BRET assay was measured, and mean ± SEM from three independent experiments was plotted as a bar graph. (f) Expression level of Gβ1 mutants. Western blotting (WB) was performed with anti‐Gβ antibody to detect Venus 156‐239‐Gβ1 proteins. The bands of Venus 156‐239‐Gβ1 and endogenous Gβ are indicated by red and black arrowheads, respectively. Mock refers to cells transfected with an empty vector (pcDNA3.1(+)). Statistics: One‐way ANOVA followed by Dunett's post hoc test was conducted with GraphPad Prism Ver. 6 (****p < 0.0001). GNB1 GenBank reference sequence NM_002074.4.