Literature DB >> 32900833

The Role of YggS in Vitamin B6 Homeostasis in Salmonella enterica Is Informed by Heterologous Expression of Yeast SNZ3.

Huong N Vu1, Tomokazu Ito1, Diana M Downs2.   

Abstract

YggS (COG0325) is a pyridoxal 5'-phosphate (PLP)-binding protein proposed to be involved in homeostasis of B6 vitamers. In Salmonella enterica, lack of yggS resulted in phenotypes that were distinct and others that were similar to those of a yggS mutant of Escherichia coli Like other organisms, yggS mutants of S. enterica accumulate endogenous pyridoxine 5'-phosphate (PNP). Data herein show that strains lacking YggS accumulated ∼10-fold more PLP in growth medium than a parental strain. The deoxyxylulose 5-phosphate-dependent biosynthetic pathway for PLP and the PNP/pyridoxamine 5'-phosphate (PMP) oxidase credited with interconverting B6 vitamers were replaced with a single PLP synthase from Saccharomyces cerevisiae The impact of a yggS deletion on the intracellular and extracellular levels of B6 vitamers in this restructured strain supported a role for PdxH in PLP homeostasis and led to a general model for YggS function in PLP-PMP cycling. Our findings uncovered broader consequences of a yggS mutation than previously reported and suggest that the accumulation of PNP is not a direct effect of lacking YggS but rather a downstream consequence.IMPORTANCE Pyridoxal 5'-phosphate (PLP) is an essential cofactor for enzymes in all domains of life. Perturbations in PLP or B6 vitamer content can be detrimental, notably causing B6-dependent epilepsy in humans. YggS homologs are broadly conserved and have been implicated in altered levels of B6 vitamers in multiple organisms. The biochemical activity of YggS, expected to be conserved across domains, is not yet known. Herein, a simplified heterologous pathway minimized metabolic variables and allowed the dissection of this system to generate new metabolic knowledge that will be relevant to understanding YggS.
Copyright © 2020 American Society for Microbiology.

Entities:  

Keywords:  PdxH; SNZ3zzm321990; YggS; homeostasis; pyridoxal 5′-phosphate; vitamin B6zzm321990

Mesh:

Substances:

Year:  2020        PMID: 32900833      PMCID: PMC7585061          DOI: 10.1128/JB.00383-20

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  30 in total

1.  Evidence that COG0325 proteins are involved in PLP homeostasis.

Authors:  Laurence Prunetti; Basma El Yacoubi; Cara R Schiavon; Ericka Kirkpatrick; Lili Huang; Marc Bailly; Mona El Badawi-Sidhu; Katherine Harrison; Jesse F Gregory; Oliver Fiehn; Andrew D Hanson; Valérie de Crécy-Lagard
Journal:  Microbiology       Date:  2016-04       Impact factor: 2.777

Review 2.  The acetate switch.

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4.  Studies on cyanobacterial protein PipY shed light on structure, potential functions, and vitamin B6 -dependent epilepsy.

Authors:  Lorena Tremiño; Alicia Forcada-Nadal; Asunción Contreras; Vicente Rubio
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Review 5.  Vitamin B6 metabolism in microbes and approaches for fermentative production.

Authors:  Jonathan Rosenberg; Till Ischebeck; Fabian M Commichau
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8.  Inhibition of phenol sulfotransferase by pyridoxal phosphate.

Authors:  R Bartzatt; J D Beckmann
Journal:  Biochem Pharmacol       Date:  1994-06-01       Impact factor: 5.858

9.  Ophthalmic acid accumulation in an Escherichia coli mutant lacking the conserved pyridoxal 5'-phosphate-binding protein YggS.

Authors:  Tomokazu Ito; Ayako Yamauchi; Hisashi Hemmi; Tohru Yoshimura
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10.  Gene disruption in Escherichia coli: TcR and KmR cassettes with the option of Flp-catalyzed excision of the antibiotic-resistance determinant.

Authors:  P P Cherepanov; W Wackernagel
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  9 in total

1.  Loss of YggS (COG0325) impacts aspartate metabolism in Salmonella enterica.

Authors:  Huong N Vu; Diana M Downs
Journal:  Mol Microbiol       Date:  2021-09-22       Impact factor: 3.979

2.  Genetic Analysis Using Vitamin B6 Antagonist 4-Deoxypyridoxine Uncovers a Connection between Pyridoxal 5'-Phosphate and Coenzyme A Metabolism in Salmonella enterica.

Authors:  Huong N Vu; Diana M Downs
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3.  Pyridoxal and α-Ketoglutarate Independently Improve Function of Saccharomyces cerevisiae Thi5 in the Metabolic Network of Salmonella enterica.

Authors:  Michael D Paxhia; Diana M Downs
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4.  Mechanism of Pyridoxine 5'-Phosphate Accumulation in Pyridoxal 5'-Phosphate-Binding Protein Deficiency.

Authors:  Tomokazu Ito; Honoka Ogawa; Hisashi Hemmi; Diana M Downs; Tohru Yoshimura
Journal:  J Bacteriol       Date:  2022-01-03       Impact factor: 3.476

5.  An Unexpected Role for the Periplasmic Phosphatase PhoN in the Salvage of B6 Vitamers in Salmonella enterica.

Authors:  Huong N Vu; Diana M Downs
Journal:  Appl Environ Microbiol       Date:  2021-01-15       Impact factor: 4.792

6.  DivIVA Regulates Its Expression and the Orientation of New Septum Growth in Deinococcus radiodurans.

Authors:  Reema Chaudhary; Swathi Kota; Hari S Misra
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Review 7.  Underground metabolism facilitates the evolution of novel pathways for vitamin B6 biosynthesis.

Authors:  Björn Richts; Fabian M Commichau
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8.  yggS Encoding Pyridoxal 5'-Phosphate Binding Protein Is Required for Acidovorax citrulli Virulence.

Authors:  Yuanjie Wang; Yuqiang Zhao; Liming Xia; Lin Chen; Yajie Liao; Baohui Chen; Yiyang Liu; Weirong Gong; Yanli Tian; Baishi Hu
Journal:  Front Microbiol       Date:  2022-01-11       Impact factor: 5.640

Review 9.  B vitamin supply in plants and humans: the importance of vitamer homeostasis.

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  9 in total

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