Literature DB >> 32895538

A temporal decomposition method for identifying venous effects in task-based fMRI.

Kendrick Kay1, Keith W Jamison2,3, Ru-Yuan Zhang2,4,5, Kamil Uğurbil2.   

Abstract

The spatial resolution of functional magnetic resonance imaging (fMRI) is fundamentally limited by effects from large draining veins. Here we describe an analysis method that provides data-driven estimates of these effects in task-based fMRI. The method involves fitting a one-dimensional manifold that characterizes variation in response timecourses observed in a given dataset, and then using identified early and late timecourses as basis functions for decomposing responses into components related to the microvasculature (capillaries and small venules) and the macrovasculature (large veins), respectively. We show the removal of late components substantially reduces the superficial cortical depth bias of fMRI responses and helps eliminate artifacts in cortical activity maps. This method provides insight into the origins of the fMRI signal and can be used to improve the spatial accuracy of fMRI.

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Year:  2020        PMID: 32895538      PMCID: PMC7721302          DOI: 10.1038/s41592-020-0941-6

Source DB:  PubMed          Journal:  Nat Methods        ISSN: 1548-7091            Impact factor:   28.547


  57 in total

1.  How much cortex can a vein drain? Downstream dilution of activation-related cerebral blood oxygenation changes.

Authors:  Robert Turner
Journal:  Neuroimage       Date:  2002-08       Impact factor: 6.556

2.  Negative BOLD-fMRI signals in large cerebral veins.

Authors:  Marta Bianciardi; Masaki Fukunaga; Peter van Gelderen; Jacco A de Zwart; Jeff H Duyn
Journal:  J Cereb Blood Flow Metab       Date:  2010-09-22       Impact factor: 6.200

3.  The effect of large veins on spatial localization with GE BOLD at 3 T: Displacement, not blurring.

Authors:  Cheryl A Olman; Souheil Inati; David J Heeger
Journal:  Neuroimage       Date:  2006-12-06       Impact factor: 6.556

4.  Spatio-temporal point-spread function of fMRI signal in human gray matter at 7 Tesla.

Authors:  Amir Shmuel; Essa Yacoub; Denis Chaimow; Nikos K Logothetis; Kamil Ugurbil
Journal:  Neuroimage       Date:  2007-01-04       Impact factor: 6.556

Review 5.  The impact of ultra-high field MRI on cognitive and computational neuroimaging.

Authors:  Federico De Martino; Essa Yacoub; Valentin Kemper; Michelle Moerel; Kâmil Uludağ; Peter De Weerd; Kamil Ugurbil; Rainer Goebel; Elia Formisano
Journal:  Neuroimage       Date:  2017-04-08       Impact factor: 6.556

Review 6.  Exploration of human visual cortex using high spatial resolution functional magnetic resonance imaging.

Authors:  Kang Cheng
Journal:  Neuroimage       Date:  2016-11-12       Impact factor: 6.556

7.  A critical assessment of data quality and venous effects in sub-millimeter fMRI.

Authors:  Kendrick Kay; Keith W Jamison; Luca Vizioli; Ruyuan Zhang; Eshed Margalit; Kamil Ugurbil
Journal:  Neuroimage       Date:  2019-02-05       Impact factor: 6.556

Review 8.  Ultra-high field MRI: Advancing systems neuroscience towards mesoscopic human brain function.

Authors:  Serge O Dumoulin; Alessio Fracasso; Wietske van der Zwaag; Jeroen C W Siero; Natalia Petridou
Journal:  Neuroimage       Date:  2017-01-16       Impact factor: 6.556

9.  Pushing the spatio-temporal limits of MRI and fMRI.

Authors:  Essa Yacoub; Lawrence L Wald
Journal:  Neuroimage       Date:  2018-01-01       Impact factor: 6.556

10.  Tesla gradient recalled echo characteristics of photic stimulation-induced signal changes in the human primary visual cortex.

Authors:  R S Menon; S Ogawa; D W Tank; K Uğurbil
Journal:  Magn Reson Med       Date:  1993-09       Impact factor: 4.668

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  4 in total

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2.  Non-neural factors influencing BOLD response magnitudes within individual subjects.

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Journal:  J Neurosci       Date:  2022-08-12       Impact factor: 6.709

3.  A massive 7T fMRI dataset to bridge cognitive neuroscience and artificial intelligence.

Authors:  Emily J Allen; Ghislain St-Yves; Yihan Wu; Jesse L Breedlove; Jacob S Prince; Logan T Dowdle; Matthias Nau; Brad Caron; Franco Pestilli; Ian Charest; J Benjamin Hutchinson; Thomas Naselaris; Kendrick Kay
Journal:  Nat Neurosci       Date:  2021-12-16       Impact factor: 28.771

Review 4.  Contribution of animal models toward understanding resting state functional connectivity.

Authors:  Patricia Pais-Roldán; Celine Mateo; Wen-Ju Pan; Ben Acland; David Kleinfeld; Lawrence H Snyder; Xin Yu; Shella Keilholz
Journal:  Neuroimage       Date:  2021-10-10       Impact factor: 7.400

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