| Literature DB >> 32892204 |
Hua-Wei Liu1, Dai-Xu Wei2, Da-Wei He1, Jiu-Zheng Deng1, Jian-Jin Zhu1, Kai Xu1, Dong Hu1, Jing Li3, Wen-Hao Hu3, Yan Wang3, Song-Hua Xiao1, Li-Gong Fu1.
Abstract
BACKGROUND The study aimed to explore the genetic association of Fc receptor-like 5 (FCRL5) gene variants (rs6427384 and rs6692977) with ankylosing spondylitis risk in Chinese Han population. MATERIAL AND METHODS Genotyping for FCRL5 gene variations rs6427384 and rs6692977 was implemented among 130 ankylosing spondylitis cases and 135 healthy persons, through polymerase chain reaction restriction fragment length polymorphism (PCR-RFLP) method. Frequency dissimilarity for 2 polymorphisms was compared between 2 groups using chi-square test. The association strength of FCRL5 gene polymorphism with ankylosing spondylitis risk was estimated by odds ratios with 95% confidence intervals. RESULTS The frequencies of rs6427384 CC genotype and C allele were significantly lower in the case group than that in the control group (P<0.05), which suggested that C allele of rs6427384 polymorphism might offer protection against ankylosing spondylitis onset. Whereas only 2 genotypes of rs6692977 were detected in the control group, and no significant association was found with ankylosing spondylitis susceptibility. CONCLUSIONS FCRL5 gene polymorphism rs6427384 was correlated to ankylosing spondylitis occurrence among Chinese Han population, while rs6692977 was not.Entities:
Mesh:
Substances:
Year: 2020 PMID: 32892204 PMCID: PMC7493454 DOI: 10.12659/MSM.920956
Source DB: PubMed Journal: Med Sci Monit ISSN: 1234-1010
Primer sequences of FCRL5 gene rs6427384 and rs6692977 polymorphisms.
| SNP | Primer sequences | Annealing temperature | |
|---|---|---|---|
| rs6427384 | Forward | 5′-GAGCATTCAGGGAACTACTA-3′ | 53°C |
| Reverse | 5′-TGGAGGAGGATATTAGGTTG-3′ | ||
| rs6692977 | Forward | 5′-CGGTCTCACTGGGCTAAA-3′ | 53°C |
| Reverse | 5′-TGACTTTGCTGGCTTTGG-3′ | ||
FCRL5 – Fc receptor-like 5; SNP – single nucleotide polymorphism.
Comparison of the genotype and allele distributions of FCRL5 gene rs6427384 and rs6692977 polymorphisms between case and control groups.
| SNPs | Genotype/allele | Case (%) (n=130) | Control (%) (n=135) | χ2 | OR (95% CI) | |
|---|---|---|---|---|---|---|
| rs6427384 | TT | 93 (68.89) | 78 (60.00) | – | – | 1 |
| CT | 38 (28.15) | 41 (31.54) | 0.856 | 0.355 | 0.777 (0.456–1.326) | |
| CC | 4 (2.96) | 11 (8.46) | 4.246 | 0.039 | 0.305 (0.093–0.996) | |
| T | 224 (82.96) | 197 (75.77) | – | – | 1 | |
| C | 46 (17.04) | 63 (24.23) | 4.196 | 0.041 | 0.642 (0.420–0.983) | |
| rs6692977 | CC | 102 (78.46) | 109 (80.74) | – | – | 1 |
| CT | 25 (19.23) | 26 (19.26) | 0.008 | 0.931 | 1.028 (0.557–1.895) | |
| TT | 3 (2.31) | 0 (0.00) | 3.159 | 0.076 | 0.971 (0.940–1.004) | |
| C | 229 (88.08) | 244 (90.37) | – | – | 1 | |
| T | 31 (11.92) | 26 (9.63) | 0.726 | 0.394 | 1.270 (0.732–2.205) |
FCRL5 – Fc receptor-like 5; SNP – single nucleotide polymorphism; OR – odds ratio; CI – confidence interval.