Literature DB >> 32879441

Aberrant expression of a novel circular RNA in pancreatic cancer.

Takahiro Seimiya1, Motoyuki Otsuka2, Takuma Iwata1, Eri Tanaka1, Kazuma Sekiba1, Chikako Shibata1, Masaru Moriyama3, Ryo Nakagawa3, Reo Maruyama4, Kazuhiko Koike1.   

Abstract

Circular RNAs (circRNAs) are single-stranded, covalently closed RNA molecules that are produced from pre-mRNAs through a process known as back-splicing. Although circRNAs are expressed under specific conditions, current understanding of their comprehensive expression status is still limited. Here, we performed a large-scale circRNA profiling analysis in human pancreatic ductal adenocarcinoma (PDAC) tissues, using circular RNA-specific RNA sequencing. We identified more than 40,000 previously unknown circRNAs, some of which were upregulated in PDAC tissues, compared with normal pancreatic tissues. We determined the full-length sequence of a circRNA upregulated in PDAC, which was derived from two noncoding RNA loci on chromosome 12. The novel circRNA, named circPDAC RNA, was not expressed in normal human cells, but was expressed in PDAC and other carcinoma cells. While postulated biological functions, such as peptide production from the circPDAC RNA, were not detected, its aberrant expression was confirmed in other PDAC tissues and in serum from a PDAC patient. These results demonstrate that comprehensive studies are necessary to reveal the expression status of circRNAs and that the circPDAC RNA identified here might serve as a novel biomarker for cancers, including PDAC.

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Year:  2020        PMID: 32879441     DOI: 10.1038/s10038-020-00826-5

Source DB:  PubMed          Journal:  J Hum Genet        ISSN: 1434-5161            Impact factor:   3.172


  2 in total

1.  Expression of circular RNA CDR1‑AS in colon cancer cells increases cell surface PD‑L1 protein levels.

Authors:  Eri Tanaka; Yu Miyakawa; Takahiro Kishikawa; Takahiro Seimiya; Takuma Iwata; Kazuyoshi Funato; Nariaki Odawara; Kazuma Sekiba; Mari Yamagami; Tatsunori Suzuki; Rei Ishibashi; Motoyuki Otsuka; Kazuhiko Koike
Journal:  Oncol Rep       Date:  2019-07-19       Impact factor: 3.906

2.  Draft genome of the protandrous Chinese black porgy, Acanthopagrus schlegelii.

Authors:  Zhiyong Zhang; Kai Zhang; Shuyin Chen; Zhiwei Zhang; Jinyong Zhang; Xinxin You; Chao Bian; Jin Xu; Chaofeng Jia; Jun Qiang; Fei Zhu; Hongxia Li; Hailin Liu; Dehua Shen; Zhonghong Ren; Jieming Chen; Jia Li; Tianheng Gao; Ruobo Gu; Junmin Xu; Qiong Shi; Pao Xu
Journal:  Gigascience       Date:  2018-04-01       Impact factor: 6.524

  2 in total
  7 in total

Review 1.  Biological functions, mechanisms, and clinical significance of circular RNA in pancreatic cancer: a promising rising star.

Authors:  Qun Chen; Jiajia Li; Peng Shen; Hao Yuan; Jie Yin; Wanli Ge; Wujun Wang; Guangbin Chen; Taoyue Yang; Bin Xiao; Yi Miao; Zipeng Lu; Pengfei Wu; Kuirong Jiang
Journal:  Cell Biosci       Date:  2022-06-21       Impact factor: 9.584

Review 2.  Oncogenomic Changes in Pancreatic Cancer and Their Detection in Stool.

Authors:  Heidelinde Sammallahti; Virinder Kaur Sarhadi; Arto Kokkola; Reza Ghanbari; Sama Rezasoltani; Hamid Asadzadeh Aghdaei; Pauli Puolakkainen; Sakari Knuutila
Journal:  Biomolecules       Date:  2022-04-29

3.  hsa_circ_0000285 facilitates thyroid cancer progression by regulating miR-127-5p/CDH2.

Authors:  Bowei Zhang; Qiaoling Li; Zhe Song; Li Ren; Yi Gu; Chao Feng; Jinju Wang; Tong Liu
Journal:  J Clin Lab Anal       Date:  2022-04-21       Impact factor: 3.124

Review 4.  Diagnostic and Prognostic Value of Circulating CircRNAs in Cancer.

Authors:  Mina Wang; Feiyu Xie; Jiaran Lin; Yihan Zhao; Qian Zhang; Zehuan Liao; Peng Wei
Journal:  Front Med (Lausanne)       Date:  2021-03-18

Review 5.  Circular RNA in pancreatic cancer: a novel avenue for the roles of diagnosis and treatment.

Authors:  Zeyin Rong; Jin Xu; Si Shi; Zhen Tan; Qingcai Meng; Jie Hua; Jiang Liu; Bo Zhang; Wei Wang; Xianjun Yu; Chen Liang
Journal:  Theranostics       Date:  2021-01-01       Impact factor: 11.556

Review 6.  Non-coding RNA-associated competitive endogenous RNA regulatory networks: Novel diagnostic and therapeutic opportunities for hepatocellular carcinoma.

Authors:  Sattar Khashkhashi Moghadam; Babak Bakhshinejad; Ali Khalafizadeh; Bashdar Mahmud Hussen; Sadegh Babashah
Journal:  J Cell Mol Med       Date:  2021-12-14       Impact factor: 5.310

7.  c-Myc Protein Level Affected by Unsymmetrical Bisacridines Influences Apoptosis and Senescence Induced in HCT116 Colorectal and H460 Lung Cancer Cells.

Authors:  Monika Pawłowska; Jolanta Kulesza; Ewa Augustin
Journal:  Int J Mol Sci       Date:  2022-03-11       Impact factor: 5.923

  7 in total

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