Literature DB >> 32870405

Novel Caulobacter bacteriophages illustrate the diversity of the podovirus genus Rauchvirus.

Bert Ely1, Jana Liese2, Scott Corley2, Doreen Nguyen2,3, Kiesha Wilson2,4, Louis Berrios2.   

Abstract

The podovirus BPP-1 is currently the only member of the Podovirus genus Rauchvirus. Here, we describe three new Caulobacter bacteriophages (Jess A, SR18, and RW) that show genetic similarity to BPP-1 but have many different genetic and structural features that differentiate them from BPP-1. Jess A and SR18 are closely related to each other and should be considered two members of a new species. They share a similar gene order with BPP-1. However, they do not appear to form lysogens or have the tropism switching mechanism that has been described for BPP-1. Bacteriophage RW also exhibits some homology to BPP-1. However, it is quite different from the other three phages, and we propose that it should be considered a representative of a third species of the genus Rauchvirus. Taken together, the differences among these four members of the genus Rauchvirus indicate that this divergent genus has a long evolutionary history and that there are many more rauchviruses waiting to be discovered.

Entities:  

Mesh:

Substances:

Year:  2020        PMID: 32870405      PMCID: PMC9391073          DOI: 10.1007/s00705-020-04791-4

Source DB:  PubMed          Journal:  Arch Virol        ISSN: 0304-8608            Impact factor:   2.685


  25 in total

1.  BIOLOGICAL PROPERTIES AND CLASSIFICATION OF THE CAULOBACTER GROUP.

Authors:  J S POINDEXTER
Journal:  Bacteriol Rev       Date:  1964-09

Review 2.  Protein database searches using compositionally adjusted substitution matrices.

Authors:  Stephen F Altschul; John C Wootton; E Michael Gertz; Richa Agarwala; Aleksandr Morgulis; Alejandro A Schäffer; Yi-Kuo Yu
Journal:  FEBS J       Date:  2005-10       Impact factor: 5.542

3.  Unipro UGENE: a unified bioinformatics toolkit.

Authors:  Konstantin Okonechnikov; Olga Golosova; Mikhail Fursov
Journal:  Bioinformatics       Date:  2012-02-24       Impact factor: 6.937

4.  The neighbor-joining method: a new method for reconstructing phylogenetic trees.

Authors:  N Saitou; M Nei
Journal:  Mol Biol Evol       Date:  1987-07       Impact factor: 16.240

5.  MEGA X: Molecular Evolutionary Genetics Analysis across Computing Platforms.

Authors:  Sudhir Kumar; Glen Stecher; Michael Li; Christina Knyaz; Koichiro Tamura
Journal:  Mol Biol Evol       Date:  2018-06-01       Impact factor: 16.240

6.  Analyses of four new Caulobacter Phicbkviruses indicate independent lineages.

Authors:  Kiesha Wilson; Bert Ely
Journal:  J Gen Virol       Date:  2019-01-18       Impact factor: 3.891

7.  Stalked bacteria: properties of deoxriybonucleic acid bacteriophage phiCbK.

Authors:  N Agabian-Keshishian; L Shapiro
Journal:  J Virol       Date:  1970-06       Impact factor: 5.103

8.  Isolation of spontaneously derived mutants of Caulobacter crescentus.

Authors:  R C Johnson; B Ely
Journal:  Genetics       Date:  1977-05       Impact factor: 4.562

9.  The Caulobacter crescentus phage phiCbK: genomics of a canonical phage.

Authors:  Jason J Gill; Joel D Berry; William K Russell; Lauren Lessor; Diego A Escobar-Garcia; Daniel Hernandez; Ashley Kane; Jennifer Keene; Matthew Maddox; Rebecca Martin; Sheba Mohan; Ashlyn M Thorn; David H Russell; Ry Young
Journal:  BMC Genomics       Date:  2012-10-10       Impact factor: 3.969

10.  The SEED and the Rapid Annotation of microbial genomes using Subsystems Technology (RAST).

Authors:  Ross Overbeek; Robert Olson; Gordon D Pusch; Gary J Olsen; James J Davis; Terry Disz; Robert A Edwards; Svetlana Gerdes; Bruce Parrello; Maulik Shukla; Veronika Vonstein; Alice R Wattam; Fangfang Xia; Rick Stevens
Journal:  Nucleic Acids Res       Date:  2013-11-29       Impact factor: 16.971

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.