Literature DB >> 3286645

2-Deoxy-2-fluoro-D-glycosyl fluorides. A new class of specific mechanism-based glycosidase inhibitors.

S G Withers1, K Rupitz, I P Street.   

Abstract

Mechanism-based glycosidase inhibitors are of considerable use in studies of enzyme mechanism, in studies of glycoprotein processing, and possibly therapeutically in control of sugar uptake. This paper describes a new general approach to mechanism-based inactivation of glycosidases which involves trapping a covalent glycosyl enzyme intermediate. This is achieved by use of 2-deoxy-2-fluoro-D-glycosyl fluorides, for which the rate of hydrolysis of the fluoroglycosyl enzyme intermediate is extremely slow, resulting in accumulation of the intermediate. Eleven different glycosidases were tested with their corresponding 2-deoxy-2-fluoro-D-glycosyl fluorides. Eight of the eleven were inactivated, four of them according to pseudo first-order kinetics and four according to a more complex kinetic scheme. The specificity of these inhibitors was investigated by assaying for inhibition of one enzyme with four different 2-deoxy-2-fluoro-D-glycosyl fluorides. Large differences in inactivation rate were observed which paralleled previously observed substrate specificities.

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Year:  1988        PMID: 3286645

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  22 in total

1.  Structural and mechanistic analysis of a β-glycoside phosphorylase identified by screening a metagenomic library.

Authors:  Spencer S Macdonald; Ankoor Patel; Veronica L C Larmour; Connor Morgan-Lang; Steven J Hallam; Brian L Mark; Stephen G Withers
Journal:  J Biol Chem       Date:  2018-01-09       Impact factor: 5.157

2.  Mechanistic investigations of unsaturated glucuronyl hydrolase from Clostridium perfringens.

Authors:  Seino A K Jongkees; Hayoung Yoo; Stephen G Withers
Journal:  J Biol Chem       Date:  2014-02-26       Impact factor: 5.157

3.  Salicortin: a repeat-attack new-mechanism-based Agrobacterium faecalis beta-glucosidase inhibitor.

Authors:  J Zhu; S G Withers; P B Reichardt; E Treadwell; T P Clausen
Journal:  Biochem J       Date:  1998-06-01       Impact factor: 3.857

4.  A sensitive gel-based method combining distinct cyclophellitol-based probes for the identification of acid/base residues in human retaining β-glucosidases.

Authors:  Wouter W Kallemeijn; Martin D Witte; Tineke M Voorn-Brouwer; Marthe T C Walvoort; Kah-Yee Li; Jeroen D C Codée; Gijsbert A van der Marel; Rolf G Boot; Herman S Overkleeft; Johannes M F G Aerts
Journal:  J Biol Chem       Date:  2014-10-24       Impact factor: 5.157

Review 5.  Approaches to labeling and identification of active site residues in glycosidases.

Authors:  S G Withers; R Aebersold
Journal:  Protein Sci       Date:  1995-03       Impact factor: 6.725

6.  Identification of Glu-519 as the catalytic nucleophile in beta-mannosidase 2A from Cellulomonas fimi.

Authors:  D Stoll; S He; S G Withers; R A Warren
Journal:  Biochem J       Date:  2000-11-01       Impact factor: 3.857

7.  9-Azido-9-deoxy-2,3-difluorosialic Acid as a Subnanomolar Inhibitor against Bacterial Sialidases.

Authors:  Wanqing Li; Abhishek Santra; Hai Yu; Teri J Slack; Musleh M Muthana; Dashuang Shi; Yang Liu; Xi Chen
Journal:  J Org Chem       Date:  2019-05-24       Impact factor: 4.354

8.  The interaction of 1-fluoro-D-glucopyranosyl fluoride with glucosidases.

Authors:  A Konstantinidis; M L Sinnott
Journal:  Biochem J       Date:  1991-10-15       Impact factor: 3.857

9.  In vivo inhibition of beta-glucosidase and beta-mannosidase activity in rats by 2-deoxy-2-fluoro-beta-glycosyl fluorides and recovery of activity in vivo and in vitro.

Authors:  J D McCarter; M J Adam; N G Hartman; S G Withers
Journal:  Biochem J       Date:  1994-07-15       Impact factor: 3.857

Review 10.  [Sugar analog inhibitors for glycosidases, tools for the elucidation of enzymatic hydrolysis of glycosides].

Authors:  G Legler
Journal:  Naturwissenschaften       Date:  1993-09
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