| Literature DB >> 32864010 |
Baihetiya Azhati1, Naibijiang Maolakuerban1, Tao Ma1, Xiaodong Li1, Mulati Rexiati1.
Abstract
INTRODUCTION: Bladder transitional cell carcinoma (BTCC) is one of the most prevalent human malignant diseases. Gemcitabine is commonly applied in the treatment of BTCC while acquired gemcitabine resistance has caused a severe impediment to recovery. This study aimed to investigate the function of DRAM2 in regulating gemcitabine resistance of BTCC.Entities:
Keywords: DRAM2; autophagy; bladder cancer; gemcitabine
Year: 2020 PMID: 32864010 PMCID: PMC7444702 DOI: 10.5114/aoms.2020.93748
Source DB: PubMed Journal: Arch Med Sci ISSN: 1734-1922 Impact factor: 3.318
Primers used in the study
| Gene | Sequences (5’–3’) |
|---|---|
| GTTATCTGGTGTGGAGTAAGT | |
| GTAGCCGTGTTCGTTCAT | |
| ACCCCGCCGCCTGTGGAGG | |
| TTCTGACGGCAGGTCAGGT | |
| GCAATGCTAAATATTGCGG | |
| CCGCAATATTTAGCATTGC | |
| CCTTCGATATAATTATTGC | |
| GCAATAATTATATCGAAGG | |
| CAACCTGACGTGCACCAATC | |
| CCTACAGGTGCCTCTCTCCT |
q – used in qRT-PCR, Si – siRNA, F – forward primer, R – reverse primer.
Relative expression values of differential genes
| Gene | T24_gemcitabine.resistant_1 | T24_gemcitabine.resistant_2 | T24_gemcitabine.resistant_3 | T24_1 | T24_2 | T24_3 |
|---|---|---|---|---|---|---|
| –0.58597 | –0.28833 | –0.58597 | 0.169592 | 0.431298 | 0.64276 | |
| –0.39833 | –0.39833 | –0.39833 | 0.291868 | 0.054718 | 0.984777 | |
| –0.21256 | 0.169592 | –0.11866 | 0.984777 | 0.984777 | 0.054718 | |
| –0.11866 | –0.25988 | –0.28833 | 0.64276 | 0.506704 | 0.291868 | |
| –0.28833 | –0.21256 | –0.06436 | 0.506704 | 0.169592 | 0.343298 | |
| 0.431298 | 0.64276 | 0.506704 | –0.28833 | –0.21256 | –0.39833 | |
| 0.984777 | 0.343298 | 0.431298 | –0.11866 | –0.39833 | –0.25988 | |
| 0.64276 | 0.506704 | 0.64276 | –0.39833 | –0.28833 | –0.28833 | |
| 0.506704 | 0.984777 | 0.984777 | –0.58597 | –0.58597 | –0.58597 |
Negative values (–) denote low expression and positive ones denote high expression.
Results of fold-change and p-value of differential genes
| Gene symbol | logFC | adj. | |
|---|---|---|---|
| –0.901304 | 0.000252951 | 0.001011803 | |
| –0.842114 | 0.001995655 | 0.004561498 | |
| –0.728634 | 0.009445382 | 0.01679179 | |
| –0.702731 | 0.001070063 | 0.002853502 | |
| –0.528279 | 0.00794332 | 0.01588664 | |
| 0.82666 | 0.000201318 | 0.001011803 | |
| 0.84541 | 0.000836573 | 0.002677033 | |
| 0.9224 | 6.02E-05 | 0.000481658 | |
| 1.41139 | 2.45E-06 | 3.91E-05 |
Negative values (–) denote low expression and positive denote high expression. LogFC represents the gene expression fold change of T24 cells compared with T24 gemcitabine resistant cells. P-value and adj. p-value refer to statistical values, p < 0.05 indicates statistical significance.
Detailed information of the differential genes
| Genes | Full name | Position | ID |
|---|---|---|---|
| ATG9 autophagy related 9 homolog B | chr7:150720259-150720200 | NM_173681 | |
| ATG12 autophagy related 12 homolog | chr5:115167432-115167373 | NM_004707 | |
| ATG4 autophagy related 4 homolog D | chr19:10663725-10663784 | NM_032885 | |
| ATG13 autophagy related 13 homolog | chr11:46690061-46690120 | NM_001205119 | |
| ATG16 autophagy related 16-like 1 | chr2:234202948-234203007 | NM_030803 | |
| ATG7 autophagy related 7 homolog | chr3:11468321-11468380 | NM_006395 | |
| DNA-damage regulated autophagy modulator 1 | chr12:102317112-102317171 | NM_018370.2 | |
| DNA-damage regulated autophagy modulator 2 | chr1:111662564-111662505 | NM_178454.5 | |
| ATG10 autophagy related 10 homolog | chr5:81550614-81550673 | NM_001131028 |
Figure 1DRAM2 was up-regulated in gemcitabine-resistant cells. A – The heat map showed that DRAM2 was up-regulated in gemcitabine-resistant cells. B – The IC50 of T24-GEM cells (9.953 μg/ml) was significantly higher than that of T24 cells (2.366 μg/ml), and the cell viability of T24-GEM cells was higher compared with T24 cells. C – The expression level of DRAM2 in T24-GEM cells was remarkably higher than that in T24 cells as examined by western blot. **P < 0.01 compared with T24 cells
Figure 2Knockdown of DRAM2 increased the sensitivity of T24-GEM cells to chemotherapy and inhibited autophagy. A – The expression of DRAM2 in T24-GEM cells significantly decreased after transfection with si-DRAM2 as measured by qRTPCR. B – The expression of DRAM2 in T24-GEM cells significantly decreased after transfection with si-DRAM2 as measured by western blot. C – T24-GEM cells became more sensitive to gemcitabineinduced damage with the IC50 level decreasing from 9.953 μg/ml to 2.266 μg/ml after transfection with si-DRAM2. D – The cell growth of T24-GEM cells transfected with si-DRAM2 was suppressed significantly confirmed by MTT assay. E – The apoptosis rate of T24-GEM cells in si-DRAM2 groups significantly increased in comparison with the si-Con group as detected by flow cytometry F – The number of autophagosome in T24-GEM cells in si-DRAM2 groups obviously decreased as shown by transmission electron microscopy. G – Autophagy markers LC3 I/II of T24-GEM cells in si-DRAM2 groups significantly increased as detected by western blot. NC – negative control group, T24-GEM cells were transfected with Lipofectamine 2000 reagent. Si-Con – siRNA control group, T24-GEM cells were transfected with siRNA control sequence. si-DRAM2 – si-DRAM2 group, T24 cells were transfected with si-DRAM2 sequence. **P < 0.01 compared with si-Con group
Figure 3Over-expression of DRAM2 decreased the sensitivity of T24 cells to chemotherapy and promoted autophagy. A – The expression of DRAM2 in T24 cells dramatically increased after transfection with pcDNA3.1-DRAM2 as observed by qRT-PCR. B – The expression of DRAM2 in pcDNA3.1 group of T24 cells was significantly higher than that in the pcDNA3.1 group as detected by western blot. C – After over-expression of DRAM2, the IC50 value increased to 3.595 μg/ml, which was much higher than that in the pcDNA3.1 group. D – MTT assay showed that cell proliferation of T24 cells was significantly enhanced in the DRAM2 overexpression group compared with the pcDNA3.1 group. E – Compared with the pcDNA3.1 group, the apoptosis rate of T24 cells drastically increased after transfection with pcDNA3.1-DRAM2 as detected by flow cytometer F – The number of autophagosome in T24 cells in the pcDNA3.1-DRAM2 group obviously increased as shown by transmission electron microscopy. G – Autophagy markers LC3 I/II of T24 cells in pcDNA3.1-DRAM2 groups significantly decreased as detected by western blot. NC – negative control group, T24 cells were transfected with the Lipofectamine 2000 reagent. pcDNA3.1 – pcDNA3.1 control group, T24 cells were transfected with empty pcDNA3.1 vector. pcDNA3.1-DRAM2 – pcDNA3.1-DRAM2 group, T24 cells were transfected with pcDNA3.1-DRAM2. **P < 0.01 compared with NC group