Literature DB >> 32863103

Mobile Transposable Elements Shape Plant Genome Diversity.

Saleh Alseekh1, Federico Scossa2, Alisdair R Fernie3.   

Abstract

The presence of various types of structural variants, including transposons, make up the major part of the genomic differences among plant species. Two recent papers, Domínguez et al. and Alonge et al. explore specifically the impact that retrotransposons and other structural variants had on several tomato phenotypes of agricultural importance.
Copyright © 2020 The Authors. Published by Elsevier Ltd.. All rights reserved.

Entities:  

Keywords:  agronomic traits; quantitative variation; structural genome variants; tomato; transposable elements

Mesh：

Substances：

Year:  2020        PMID： 32863103     DOI： 10.1016/j.tplants.2020.08.003

Source DB:  PubMed          Journal:  Trends Plant Sci        ISSN： 1360-1385            Impact factor:   18.313


  3 in total

1.  Using precision phenotyping to inform de novo domestication.

Authors:  Alisdair R Fernie; Saleh Alseekh; Jie Liu; Jianbing Yan
Journal:  Plant Physiol       Date:  2021-07-06       Impact factor: 8.340

Review 2.  The INCREASE project: Intelligent Collections of food-legume genetic resources for European agrofood systems.

Authors:  Elisa Bellucci; Orlando Mario Aguilar; Saleh Alseekh; Kirstin Bett; Creola Brezeanu; Douglas Cook; Lucía De la Rosa; Massimo Delledonne; Denise F Dostatny; Juan J Ferreira; Valérie Geffroy; Sofia Ghitarrini; Magdalena Kroc; Shiv Kumar Agrawal; Giuseppina Logozzo; Mario Marino; Tristan Mary-Huard; Phil McClean; Vladimir Meglič; Tamara Messer; Frédéric Muel; Laura Nanni; Kerstin Neumann; Filippo Servalli; Silvia Străjeru; Rajeev K Varshney; Marta W Vasconcelos; Massimo Zaccardelli; Aleksei Zavarzin; Elena Bitocchi; Emanuele Frontoni; Alisdair R Fernie; Tania Gioia; Andreas Graner; Luis Guasch; Lena Prochnow; Markus Oppermann; Karolina Susek; Maud Tenaillon; Roberto Papa
Journal:  Plant J       Date:  2021-09-23       Impact factor: 7.091

3.  A comprehensive annotation dataset of intact LTR retrotransposons of 300 plant genomes.

Authors:  Shan-Shan Zhou; Xue-Mei Yan; Kai-Fu Zhang; Hui Liu; Jie Xu; Shuai Nie; Kai-Hua Jia; Si-Qian Jiao; Wei Zhao; You-Jie Zhao; Ilga Porth; Yousry A El Kassaby; Tongli Wang; Jian-Feng Mao
Journal:  Sci Data       Date:  2021-07-15       Impact factor: 6.444
  3 in total

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