Literature DB >> 32841461

Automated conservation assessment of the orchid family with deep learning.

Alexander Zizka1,2, Daniele Silvestro3,4, Pati Vitt1,5, Tiffany M Knight1,6,7.   

Abstract

International Union for Conservation of Nature (IUCN) Red List assessments are essential for prioritizing conservation needs but are resource intensive and therefore available only for a fraction of global species richness. Automated conservation assessments based on digitally available geographic occurrence records can be a rapid alternative, but it is unclear how reliable these assessments are. We conducted automated conservation assessments for 13,910 species (47.3% of the known species in the family) of the diverse and globally distributed orchid family (Orchidaceae), for which most species (13,049) were previously unassessed by IUCN. We used a novel method based on a deep neural network (IUC-NN). We identified 4,342 orchid species (31.2% of the evaluated species) as possibly threatened with extinction (equivalent to IUCN categories critically endangered [CR], endangered [EN], or vulnerable [VU]) and Madagascar, East Africa, Southeast Asia, and several oceanic islands as priority areas for orchid conservation. Orchidaceae provided a model with which to test the sensitivity of automated assessment methods to problems with data availability, data quality, and geographic sampling bias. The IUC-NN identified possibly threatened species with an accuracy of 84.3%, with significantly lower geographic evaluation bias relative to the IUCN Red List and was robust even when data availability was low and there were geographic errors in the input data. Overall, our results demonstrate that automated assessments have an important role to play in identifying species at the greatest risk of extinction.
© 2020 The Authors. Conservation Biology published by Wiley Periodicals LLC on behalf of Society for Conservation Biology.

Keywords:  IUC-NN; IUCN Red List; Lista Roja UICN; Orchidaceae; aprendizaje mecánico; biodiversidad; biodiversity; calidad de datos; data quality; machine learning; sampling bias; sesgo de muestreo

Mesh:

Year:  2020        PMID: 32841461     DOI: 10.1111/cobi.13616

Source DB:  PubMed          Journal:  Conserv Biol        ISSN: 0888-8892            Impact factor:   6.560


  10 in total

1.  The likely extinction of hundreds of palm species threatens their contributions to people and ecosystems.

Authors:  S Bellot; Y Lu; A Antonelli; W J Baker; J Dransfield; F Forest; W D Kissling; I J Leitch; E Nic Lughadha; I Ondo; S Pironon; B E Walker; R Cámara-Leret; S P Bachman
Journal:  Nat Ecol Evol       Date:  2022-09-26       Impact factor: 19.100

2.  Improving biodiversity protection through artificial intelligence.

Authors:  Daniele Silvestro; Alexandre Antonelli; Stefano Goria; Thomas Sterner
Journal:  Nat Sustain       Date:  2022-03-24

3.  Automated assessment reveals that the extinction risk of reptiles is widely underestimated across space and phylogeny.

Authors:  Gabriel Henrique de Oliveira Caetano; David G Chapple; Richard Grenyer; Tal Raz; Jonathan Rosenblatt; Reid Tingley; Monika Böhm; Shai Meiri; Uri Roll
Journal:  PLoS Biol       Date:  2022-05-26       Impact factor: 9.593

4.  Deep Species Distribution Modeling From Sentinel-2 Image Time-Series: A Global Scale Analysis on the Orchid Family.

Authors:  Joaquim Estopinan; Maximilien Servajean; Pierre Bonnet; François Munoz; Alexis Joly
Journal:  Front Plant Sci       Date:  2022-04-22       Impact factor: 6.627

5.  Nectar Chemistry or Flower Morphology-What Is More Important for the Reproductive Success of Generalist Orchid Epipactis palustris in Natural and Anthropogenic Populations?

Authors:  Emilia Brzosko; Andrzej Bajguz; Justyna Burzyńska; Magdalena Chmur
Journal:  Int J Mol Sci       Date:  2021-11-10       Impact factor: 5.923

6.  Global Estimation and Mapping of the Conservation Status of Tree Species Using Artificial Intelligence.

Authors:  Sandro Valerio Silva; Tobias Andermann; Alexander Zizka; Gregor Kozlowski; Daniele Silvestro
Journal:  Front Plant Sci       Date:  2022-04-29       Impact factor: 5.753

7.  More than half of data deficient species predicted to be threatened by extinction.

Authors:  Jan Borgelt; Martin Dorber; Marthe Alnes Høiberg; Francesca Verones
Journal:  Commun Biol       Date:  2022-08-04

Review 8.  An overview of remote monitoring methods in biodiversity conservation.

Authors:  Rout George Kerry; Francis Jesmar Perez Montalbo; Rajeswari Das; Sushmita Patra; Gyana Prakash Mahapatra; Ganesh Kumar Maurya; Vinayak Nayak; Atala Bihari Jena; Kingsley Eghonghon Ukhurebor; Ram Chandra Jena; Sushanto Gouda; Sanatan Majhi; Jyoti Ranjan Rout
Journal:  Environ Sci Pollut Res Int       Date:  2022-10-05       Impact factor: 5.190

9.  Extinction Risk Assessment of the Greek Endemic Flora.

Authors:  Konstantinos Kougioumoutzis; Ioannis P Kokkoris; Maria Panitsa; Arne Strid; Panayotis Dimopoulos
Journal:  Biology (Basel)       Date:  2021-03-04

10.  The adaptive challenge of extreme conditions shapes evolutionary diversity of plant assemblages at continental scales.

Authors:  Danilo M Neves; Andrew J Kerkhoff; Susy Echeverría-Londoño; Cory Merow; Naia Morueta-Holme; Robert K Peet; Brody Sandel; Jens-Christian Svenning; Susan K Wiser; Brian J Enquist
Journal:  Proc Natl Acad Sci U S A       Date:  2021-09-14       Impact factor: 11.205

  10 in total

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