Literature DB >> 32834600

A mathematical study on the spread of COVID-19 considering social distancing and rapid assessment: The case of Jakarta, Indonesia.

Dipo Aldila1, Sarbaz H A Khoshnaw2, Egi Safitri1, Yusril Rais Anwar1, Aanisah R Q Bakry1, Brenda M Samiadji1, Demas A Anugerah1, M Farhan Alfarizi Gh1, Indri D Ayulani1, Sheryl N Salim1.   

Abstract

The aim of this study is to investigate the effects of rapid testing and social distancing in controlling the spread of COVID-19, particularly in the city of Jakarta, Indonesia. We formulate a modified susceptible exposed infectious recovered compartmental model considering asymptomatic individuals. Rapid testing is intended to trace the existence of asymptomatic infected individuals among the population. This asymptomatic class is categorized into two subclasses: detected and undetected asymptomatic individuals. Furthermore, the model considers the limitations of medical resources to treat an infected individual in a hospital. The model shows two types of equilibrium point: COVID-19 free and COVID-19 endemic. The COVID-19-free equilibrium point is locally and asymptotically stable if the basic reproduction number ( R 0 ) is less than unity. In contrast, COVID-19-endemic equilibrium always exists when R 0 > 1 . The model can also show a backward bifurcation at R 0 = 1 whenever the treatment saturation parameter, which describes the hospital capacity, is larger than a specific threshold. To justify the model parameters, we use the incidence data from the city of Jakarta, Indonesia. The data pertain to infected individuals who self-isolate in their homes and visit the hospital for further treatment. Our numerical experiments indicate that strict social distancing has the potential to succeed in reducing and delaying the time of an outbreak. However, if the strict social distancing policy is relaxed, a massive rapid-test intervention should be conducted to avoid a large-scale outbreak in the future.
© 2020 Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  34D05; 92D30; Asymptomatic cases; Backward bifurcation; Basic reproduction number; COVID-19; Rapid test; Social distancing

Year:  2020        PMID: 32834600      PMCID: PMC7321057          DOI: 10.1016/j.chaos.2020.110042

Source DB:  PubMed          Journal:  Chaos Solitons Fractals        ISSN: 0960-0779            Impact factor:   9.922


Introduction

Coronavirus disease 2019, or COVID-19, is an infectious disease caused by a new type of coronavirus named severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), which is known to have originated in the city of Wuhan, China in December 2019 [1]. This virus is transmitted from human to human and has spread widely across China and 214 other countries and territories. It is spread through droplets that exit the nose or mouth when a person infected with COVID-19 coughs or exhales. These droplets then land and settle on surrounding objects and surfaces. If a person who touches any of those objects or surfaces then touches their eyes, nose, or mouth, they may become infected. Transmission can also occur if a person inhales droplets from a cough or breath of a person infected with COVID-19 [2]. On March 12, 2020, the World Health Organization (WHO) declared COVID-19 as a pandemic. Till May 16, 2020, there were 4,338,658 cases and 297,119 deaths worldwide. In Indonesia, there were 17,025 positive COVID-19 cases and 1,089 deaths till May 13, 2020 [2]. According to the WHO [3], COVID-19 generally has an incubation period of 5–6 days, with a range of 1–14 days. The symptoms of COVID-19 are nonspecific and vary widely, ranging from no symptoms to severe pneumonia and eventual death. Based on specific cases, some of the symptoms of COVID-19 include fever, dry cough, fatigue, nasal congestion, diarrhea, and headache. People who are at high risk for severe illness include those aged 60 years and over and those with hypertension, diabetes, cardiovascular problems, cancer, or a chronic respiratory disease. The mortality rate increases with age, with the highest death rate among people aged over 80 years. In children, the disease is relatively rare. Each country is at a different stage of the epidemic. In most countries where the spread of the virus has caused outbreaks with exponential growth, governments have called for physical distancing and movement restrictions, commonly known as lockdown, to slow the spread of the COVID-19 outbreak [4]. Some of these countries include China, Italy, and the United Kingdom. Moreover, there are some countries that have managed to handle the COVID-19 outbreak without a lockdown; one such country is South Korea. Based on a report in [5], South Korea conducted massive numbers of polymerase chain reaction tests, which reached 726,747 by May 15, 2020 [6]. In addition to death, this pandemic has also had negative psychological, economic, and social impacts globally. The COVID-19 pandemic has resulted in changes in the work environment, indirectly affecting gender inequality, and an increased risk of suicide owing to lockdown, social distancing, and economic crisis [7]. Panic in communities may be reduced by educating the public regarding the predictions of the COVID-19 epidemic and the interventions that must be conducted. Communities must also unite and work together to help governments overcome the epidemic by following the guidelines provided by the relevant authorities [7]. Several mathematical models have been proposed by several authors to understand the spreading mechanism of COVID-19. In [8], [9], [10], [11], [12], [13], [14], the authors proposed a modified susceptible-exposed-infected-recovered (SEIR) model to understand the effects of undetected infection, hospitalization, and quarantine. The model was analyzed to determine the equilibria and the basic reproduction number. Parameter estimation was conducted by the authors in [11], [12], [15], [16] using a statistical approach involving a Bayesian or Markov Chain Monte Carlo method. In addition to compartmental deterministic modeling, the spread of COVID-19 can be predicted statistically using a time-series approach [17], [18], [19]. A time-series model is effective owing to its ability to accommodate the factors influencing the spread of COVID-19 that cannot be calculated using other statistical approaches [17]. A frequently used time-series model is the autoregressive integrated moving average (p, d, q). In this study, we propose a modified SEIR model that considers asymptomatic cases. These asymptomatic cases describe a hidden case in the field. As an intervention, rapid testing has been implemented by many countries to detect infected individuals in this asymptomatic group. Therefore, we categorize our asymptomatic individuals into two groups: detected and undetected. Furthermore, we also accommodate the limitation of resources for medical treatment. This is an extremely important factor that will have an essential role in a successful eradication of COVID-19. Many countries are not ready for an exponential growth of COVID-19 cases because many hospitals will become overwhelmed by the high number of patients. To validate the model, COVID-19 incidence data from the city of Jakarta are used for parameter estimation. The basic reproduction number is calculated, and a sensitivity analysis of the model is conducted. The model is then used to predict the effects of social and physical distancing to stop the spreading of COVID-19, and to monitor the effects of the plan to gradually ease social distancing guidelines of the government in Jakarta. The remainder of this paper is organized as follows. In Section 2, the construction of the SEA compartmental model is described. Next, the mathematical properties of the model, such as the equilibrium points, basic reproduction number, and existence of backward bifurcation, are detailed in Section 3. In Section 4, we explain the real-world problem using the incidence data of Jakarta, Indonesia. A discussion on the basic reproduction number and the results of the sensitivity analysis are provided in Section 6. Finally, some conclusions are presented in Section 7.

Proposed SEA model

The objective of our study is to analyze the effect of rapid testing and self-monitored isolation, and to predict the long-term dynamics of the incidence data of Jakarta, Indonesia. To achieve these purposes, our model should consider asymptomatic cases, as well as a parameter describing a rapid test intervention. To achieve this, let us divide the human population into six categories based on their health status: Susceptible population (S(t)) := Group of susceptible individuals. Exposed population (E(t)) := Group of individuals, who are already infected by COVID-19, but not yet infective. Infected population (I(t)) := Group of an infected individuals who shows symptoms and are treated in a hospital. Limited social interactions occur in this group of individuals. Asymptomatic undetected population (A(t)) := Infected population having a capability to transmit COVID-19, do not show any symptoms, and undetected by the government. Such individuals have a larger probability of spreading the disease compared with I and A. Asymptomatic detected population (A(t)) = Individuals in this category are similar to those in A in terms of their health status, but have already been detected by the government through a swab-test, rapid test, or other tests. Although this group of individuals has the capability of spreading the disease, they do not isolate themselves in a hospital owing to a limited hospital capacity. Therefore, a monitored self-isolation is applicable to them. Recovered population (R(t)) := Recovered individuals with a short-term immunity to COVID-19. Therefore:We make the following assumptions for the formulation of the model. The human population is homogeneously mixed. Rapid testing for COVID-19 is implemented to identify infected individuals among the population and is provided to an individual who does not show any symptoms. Therefore, this rapid testing is given to an individuals in all types of compartments, except I. Asymptomatic undetected individuals can socialize more than those in I and A owing to the absence of symptoms . Disease induced death only exists for individuals in I. Infected individuals in hospitals have a chance to recover faster than infected individuals who have not received medical treatment. Caused by a limited number of beds or other medical resources in a hospital, we assume that the additional recovery rate for an infected individual in the hospital is saturated with respect to the number of patients that need to be handled, using the saturated parameter b. Using the transmission diagram given in Fig. 1 and the aforementioned assumptions, the model to describes the transmission of COVID-19 by considering rapid testing and asymptomatic cases is expressed as the following systems of equation.Here, Λ, β, μ, and ϕ are the natural recruitment rate, infection rate, natural death rate, and death rate from COVID-19, respectively. ξ and ξ represent the reduction of β for I and A, respectively, owing to isolation at home or in a hospital. Furthermore, α, γ 0, and δ denote the progression rate of COVID-19 based on its incubation period, natural recovery rate, and disappearance of temporal immunity, respectively. Note that p describes the proportion of exposed individuals who have progressed into asymptomatic individuals, γ 1 is the enhancement of natural recovery rate owing to treatment in a hospital, η is the rate of hospitalization from A to I, and ν is the effort required for early detection of COVID-19 infection. Note that system (1) is supplemented with an non-negative initial condition:
Fig. 1

Transmission diagram of COVID-19 spread considering asymptomatic undetected cases and rapid-test.

Transmission diagram of COVID-19 spread considering asymptomatic undetected cases and rapid-test.

Model analysis

Basic properties of the model

It is not difficult to prove that all variables in system (1) remain nonnegative for all time t ≥ 0 as long as the initial conditions are nonnegative. Next, we show that our model is well-posed in biological meaning. Let us consider the possible region Summation of all rates of change for each variable in system (1) yieldsClearly, if then we have that . Since is bounded by we have that . Furthermore, we have that . Additionally, it can be seen that every solution of our COVID-19 model in  (1)with the initial condition in will remain in for all t > 0. Therefore, we have that is positively invariant and attracting. Hence, the COVID-19 model in (1) is well-posed.

Qualitative analysis of the model

COVID-19 free equilibrium and the basic reproduction number

Considering the right-hand side of system (1) is equal to zero, we have two types of equilibrium points for system (1). The first equilibrium is the COVID-19 free equilibrium point, which is given byUsing the next-generation matrix approach [20], the basic reproduction number of system (1) is given by (See Appendix A for the derivation of the ) From the results in [21], we have the local stability criteria of depending on in the following theorem. The COVID-19 free equilibriumis locally asymptotically stable ifand unstable otherwise. Threshold quantity presents the expected number of new COVID-19 infections generated from one primary infection into an absolute susceptible population during a single infection period. From the results of Theorem 1, it can be shown that COVID-19 can be eliminated from the population if . Please note that in (4) is a basic reproduction number when a rapid test is implemented. When a rapid test is not implemented into the model, then in (4) is reduced to the following:This shows the multiplication among the total human population when no COVID-19 exists, ratio between the infection rate and exposed/incubation period of category E, and infection period of categories A and I. It is easy to see that reducing is highly related to reducing β, which can be implemented by reducing the contact probability through lockdown or social distancing, and reducing ξ by conducting a proper quarantine procedure in a hospital, such that ξ → 0. Another way to reduce is by increasing the recovery rate owing to hospitalization (γ 1). Further discussion on the complete is provided in Section 5.

The COVID-19 endemic equilibrium points

The endemic equilibrium point of system (1) is expressed aswhere expressed as a functions of I* are described in Appendix B, whereas I* is taken from the positive roots of the following third order polynomial :withHere, a 2 and a 1 have significantly long expressions and are therefore omitted in this study. Because a 3 is always positive, and a 0 < 0 if we have the following theorem. System (1) has always a COVID-19 endemic equilibrium pint whenever . Note that has one zero roots whenever , whereas the other two roots can be positive, negative, or even imaginary. Let us consider the most extreme case in which we have no positive roots. Because we have a 3 > 0, we then have and . Therefore, when we have the polynomial is being translated downward and providing one positive root. This completes the proof.   □ Theorem 1 and 2 indicate that become the endemic threshold; this occurs because,when we have that the COVID-19 free equilibrium is stable; however, when then we have at least one positive COVID-19 endemic equilibrium. Furthermore, since the polynomial is third-order , we have at most three COVID-19 endemic equilibrium. Next, we analyze the possibility of having a COVID-19 endemic equilibrium when . The results stated in the following theorem. Whenever b > b*, where and system (1) has a COVID-19 endemic equilibrium point when . For the proof of this theorem, please refer to Appendix C. □ As a direct consequence of Theorem 3 and 2, we have the following corollary. System (1) has two endemic equilibrium points when if b > b*. We end this section with the following theorem to describe the condition of a backward bifurcation of system (1). System (1) undergoes backward bifurcation in if b > b*. In contrast , it undergoes forward bifurcation in if b < b*. For the proof of Theorem, please see Appendix D  □

Parameter estimation: case study of the city of Jakarta, Indonesia

COVID-19 incidence data of Jakarta

Jakarta is the capital of Indonesia, with a population of 10,374,235 as of 2019, and a population growth rate of 0.94% per year. Jakarta consists of six sub-governments, namely South, East, West, North and Central Jakarta, and the Thousand Islands. The largest population is in East Jakarta at 2,916,020 people. The first COVID-19 case in Jakarta was recorded on March 3, 2020, from a patient who had contact with Japanese citizens (whom later on was confirmed to be positive for COVID-19). Social distancing is the most preferred action by the Jakarta city government to reduce the spread of COVID-19. This rule has been applied since April 10, 2020, which is based on Jakarta Governor Regulation No 33/2020. The regulation requires the closure of schools, public facilities such as malls, and many other places that might potentially have a gathering of people in the same location . The data used in this study are COVID-19 incident data from Jakarta, collected from March 3, to May 10, 2020. These data can be divided into two types of active cases, namely active cases that must be treated in a hospital (I) and independent isolation at home (A). The incident data used are listed in Table 1 .
Table 1

COVID-19 incidence data from Jakarta, collected from 03 March 2020 until 10 May 2020.

DataIAdDataIAdDataIAd
3 March ’202026 March ’2032411318 April ’201769670
4 March ’202027 March ’2034613219 April ’201839695
5 March ’204028 March ’2036413420 April ’201826752
6 March ’204029 March ’2043515121 April ’201935753
7 March ’204030 March ’2044915122 April ’201985815
8 March ’204031 March ’2045115723 April ’202010888
9 March ’203101 April ’2049917624 April ’201988959
10 March ’203102 April ’2056519525 April ’2019471050
11 March ’203303 April ’2062720926 April ’2019521099
12 March ’205704 April ’2069122327 April ’2019501169
13 March ’206505 April ’2068527928 April ’2020241206
14 March ’207006 April ’2078331729 April ’2020021238
15 March ’208407 April ’2089533830 April ’2020731272
16 March ’207878 April ’209763571 May ’2021511312
17 March ’2083279 April ’2010774052 May ’2020891304
18 March ’20914210 April ’2011394333 May ’2020621323
19 March ’201215711 April ’2011524414 May ’2020801330
20 March ’201256612 April ’2012774685 May ’2021461370
21 March ’201577113 April ’2013705216 May ’2021951381
22 March ’201777714 April ’2013855587 May ’2021961431
23 March ’202257915 April ’2014246138 May ’2022811426
24 March ’2026010916 April ’2016016199 May ’2023121442
25 March ’2029011217 April ’20172764310 May ’2023601533
COVID-19 incidence data from Jakarta, collected from 03 March 2020 until 10 May 2020.

Estimation of epidemiological parameters

To conduct the parameter estimation for data-driven from Jakarta, Indonesia, owing to the short-term of the data, we consider model (1) but neglect the natural newborns, natural death rate, and the drop out rate from recovered compartment due to the possibility that a temporal immunities will expire . Based on this assumption, Model (1) now reads as follows:To conduct a parameter estimation, we divided our data based on the date that strict social distancing in Jakarta was first time implemented. The first interval is from March 3, until April 10, 2020. During this interval, we found that the best fit parameters are :With these parameters, we have that in Jakarta during this interval is 1.75. This indicates that COVID-19 has a big potency to be endemic in Jakarta if accurate, precise, and fast policies were not carried out soon. During the second interval, after the strict social distancing implemented, we set other parameters constant, whereas β and η should be re-estimated. In this second interval from April 11 until May 10, we have and . This data gives in the second interval. It can be seen that β was reduced by 34%, which indicates the effect of the social distancing policy. On the other hand, η reduced by 68.4%, since the number of infected individual continued increasing in the hospitals. Therefore, the transition from A to I need to be reduced because of the limitation on the hospital capacity. The results of the parameter estimation for system (1) with respect to the incidence data in Jakarta are given in Fig. 2 .
Fig. 2

Comparison between COVID-19 incidence data of Jakarta from March 3, - May 10, 2020 in Jakarta (dotted) with the simulation of A and I from the model in system (9).

Comparison between COVID-19 incidence data of Jakarta from March 3, - May 10, 2020 in Jakarta (dotted) with the simulation of A and I from the model in system (9).

Discussion of and sensitivity analysis

We conduct numerical experiments in this section in three scenarios. The aim of the first experiment is to analyze the elasticity of . From Theorem 1, Theorem 2, Theorem 3and 4, it is clear to see that our model is dependent on the size of . Understanding how behave when the parameters change will help acchieve a more effective intervention to control the spread of COVID-19. The second experiment aims to see how the estimated parameter from the incidence data in Jakarta might exhibit a backward bifurcation when the quality and size of the patients handled in the hospital getting worse. The final experiment is the sensitivity analysis to determine the most significant parameters in determining the dynamics of each variable.

Elasticity of

To perform the elasticity analysis on we calculate the normalized forward sensitivity index of using the following formula :where ω is the set of parameters in system (1). For example, the elasticity index of with respect to α is given byIn a similar way, we can find all elasticity indices of for the remaining of parameters. Substituting the parameters value found from Section 4 and assuming and the elasticity value of all parameters in system (1) respect to is given in Table 2 .
Table 2

Elasticity value of with respect to the parameters in system (1).

ωΓωR0ωΓωR0
Λ1β1
μ-1.000262026δ0
η−0.07563488004ν−0.2174486541
ξ10.2088834091ξa0.2268945826
α0.0001685711554γ0−0.5986593834
γ1−0.08578494311ϕ−0.02237868082
p0.6929432923b0
Elasticity value of with respect to the parameters in system (1). The positive and negative signs in Table 2 indicate increasing and decreasing values of with respect to the parameters, respectively. Therefore, we can state that increases when Λ, β, ξ or p increases. In the other hand, whenever μ, η, ν, γ 0, γ 1, or ϕ increases, then will decreases. Furthermore, for an example, since increasing ν for 10% will reduce 2.174486541%. A similar interpretation is given for the remaining parameters in Table 2. It is interesting to see that the saturation parameter b, which describes the capacity of the hospital or the number of a medical officers, does not affect the size of since . However, bplays an important role in determining whether the system (1) undergoes a forward or backward bifurcation when . From Table 2, it can be seen that βis the most positive significant parameter that can be used to control . Therefore, social/physical distancing is a very reasonable intervention to control the spread of COVID-19. Furthermore, it can be seen that reducing ξand ξ will reduce which indicates that a better the reduction of contact from infected humans through isolation in the hospital or at home is able to reduce . The most negative index of is given by μ. However, this parameter can not be changed in the field. The most negative index parameter that is controllable in the field is ν, which describes the rate of the rapid testing. Therefore, we can conclude that more massive the government endeavor is to find the asymptomatic individuals, and the more such individuals are asked to isolate independently at home, the more we can reduce . Furthermore, we can see that increasing the additional recovery rate caused by hospitalization (γ 1) will reduce . Fig. 3 presents an area for a combination between ν and β that will determine the size of . It can be seen that the increased value of βwill increase while an increased value of ν will reduce . The area of βcan differ into three intervals. The first interval is when . In this interval, is always larger than unity for all value of ν between 0 and 1. This means that the intervention of rapid tests will not make the COVID-19 free equilibrium stable. The second interval is when . In this area, a combination of νand β should be considered carefully to reach the condition of a stable COVID-19 free equilibrium point. For more precisely, for a random in the second interval, it needs ν > ν* wheresuch that COVID-19 eradicated from the community. For an example, if then it requires ν > 0.5630546276 to achieve a stable COVID-19 free equilibrium point. The last interval is when . In the third interval, the intervention of rapid testing is not needed to reach a stable COVID-19 free equilibrium point. However, giving a positive value of νwill accelerate the time needed to achieve a stable COVID-19 free equilibrium point.
Fig. 3

Sensitivity area of with respect to ν and β. The black curve indicates .

Sensitivity area of with respect to ν and β. The black curve indicates .

Forward and backward bifurcation

From Theorem 4, system (1) undergoes backward bifurcation in if b < b*. In the other hand, when b > b*, then system (1) undergoes forward bifurcation in . Using estimated parameters value from previous section, we have that when and . Therefore, we have that our system (1)undergoes forward bifurcation when since which illustrated in Fig. 4 (a). On the other hand, backward bifurcation appears when we choose which describes a low capacity of the hospital to take care of the infected individual. This is illustrated in Fig. 4(b).
Fig. 4

Forward (a) and backward (b) bifurcation diagrams of system (1) showing the exchange of stability in . The red curve presents the COVID-19 endemic equilibrium point, while the blue curve indicates a COVID-19 free equilibrium point. (For interpretation of the references to colour in this figure legend, the reader is referred to the web version of this article.)

Forward (a) and backward (b) bifurcation diagrams of system (1) showing the exchange of stability in . The red curve presents the COVID-19 endemic equilibrium point, while the blue curve indicates a COVID-19 free equilibrium point. (For interpretation of the references to colour in this figure legend, the reader is referred to the web version of this article.)

Sensitivity analysis

We compute the local sensitivity for our suggested model equations of COVID-19 in system (1). The computational results here are obtained using three different techniques: non-normalizations, half normalizations and full normalizations using SimBiology Toolbox for MATLAB; see Fig. 5, Fig. 6, Fig. 7 . Interestingly, the results provide us further understanding to the model and give ones to identify the critical model parameters. Based on non-normalization technique, the most sensitive parameter in the suggested model is the infectious transmission rate β; see Figs. 5a. In addition, the susceptible and exposed individuals are also extremely sensitive to these parameters {ξ 0, b}, see Fig. 5b. By using a half normalization technique, the model states {E, A} are extremely sensitive to the infectious transmission rate β, while they are less sensitive to the other parameters, see Fig. 6a and b. Furthermore, computational results show that the exposed infected, asymptomatic undetected individuals, asymptomatic detected individuals, symptomatic infected and recovered individuals are more sensitive to the set of parameters {β, p, α, ν, γ 0} while they are less sensitive to the other model parameters, see Fig. 7a and b. This gives us how public health partners pay more attention priority on interventions for such groups.
Fig. 5

Local sensitivity analysis with non–normalization technique in computational simulations using MATLAB for confirmed cases of the COVID-19 in Jakarta, (a) the sensitivity of all variables with respect to all parameters, (b) the sensitivity of all variables with respect to all parameters except β.

Fig. 6

Local sensitivity analysis with half normalization technique in computational simulations using MATLAB for confirmed cases of the COVID-19 in Jakarta, (a) the sensitivity of all variables with respect to all parameters, (b) the sensitivity of all variables with respect to all parameters except β.

Fig. 7

Local sensitivity analysis with full normalization technique in computational simulations using MATLAB for confirmed cases of the COVID-19 in Jakarta, (a) the sensitivity of all variables with respect to all parameters, (b) the sensitivity of all variables with respect to parameters {ξ1, ϕ, b, η}.

Local sensitivity analysis with non–normalization technique in computational simulations using MATLAB for confirmed cases of the COVID-19 in Jakarta, (a) the sensitivity of all variables with respect to all parameters, (b) the sensitivity of all variables with respect to all parameters except β. Local sensitivity analysis with half normalization technique in computational simulations using MATLAB for confirmed cases of the COVID-19 in Jakarta, (a) the sensitivity of all variables with respect to all parameters, (b) the sensitivity of all variables with respect to all parameters except β. Local sensitivity analysis with full normalization technique in computational simulations using MATLAB for confirmed cases of the COVID-19 in Jakarta, (a) the sensitivity of all variables with respect to all parameters, (b) the sensitivity of all variables with respect to parameters {ξ1, ϕ, b, η}. Consequently, identification of the critical model parameters in this study based on computational simulations is an effective way to further study the model both practically and theoretically and to provide some suggestions for future improvements regarding COVID-19 transmissions, interventions, and control of the spread of the disease. It can be concluded that the person–to–person contact, the transmission rate, the progression rate of the incubation period, the effort for early detection through testing and the natural recovery rate may have a significant role in controlling this disease. Other factors also have a role to infect in the infection of people at different levels, as clearly indicated in our computational simulations.

Analyzing the plan for gradual relaxing of strict social distancing in the city of Jakarta, Indonesia

In Fig. 8 , we present the estimation and actual incidence data of COVID-19 in Jakarta, from March 3, until May 10, and then the simulation continued for a longer period of time. Note that the policy of Jakarta government to conduct physical and social distancing was applied on April 10, 2020. Since April 10, the reduction of incidence occurs significantly. The physical distancing in Jakarta called PSBB (in Indonesian: Pembatasan Sosial Berskala Besar (large-scale social restriction)). It can be seen that, if social distancing intervention is maintained for a longer period of time, then the outbreak of COVID-19 in Jakarta will be significantly reduced, and delayed. With this intervention, the hospitals can treat infected individuals at a maximum capacity.
Fig. 8

A long-time simulation for the prediction of incidence of COVID-19 in Jakarta.

A long-time simulation for the prediction of incidence of COVID-19 in Jakarta. Recently, the Jakarta government has planned to relax the strict social distancing policy. This relaxed policy will be implemented in five-phases: Phase 1: June 1- June 8. Industry and public services can operate based on the Covid-19 health protocol. Phase 2: June 8, - June 15. Shopping centers may operate as before (shops may open), but under the COVID-19 health protocol. Phase 3: June 15, - July 6. Similar to phase 2, but all the schools will not open simultaneously. Phase 4: July 6, - July 20. Economic activities may be evaluated, for example, in case of restaurants and travel. Phase 5: July 20, - July 27. Evaluation of the social activities on a large scale will be evaluated. Based on this description, it is assumed that the transmission rate will increasing step by step from (when social distancing implemented in April 10) to (early infection period of data). To handle this, we assume β to be a step function as follows:Using above β(t), the dynamics of I(t) and A(t) are shown in Fig. 9 . It appears that the policy of relaxing the strict social distancing rule can result in an increasing number of new infections. However, it will not be as it was before social distancing was implemented. The possible explanation for this is that the policy for relaxing the social distancing is too early to take place.
Fig. 9

Long-time simulation for prediction of incidence of COVID-19 in Jakarta with easing of social distancing policy.

Long-time simulation for prediction of incidence of COVID-19 in Jakarta with easing of social distancing policy. Based on the elasticity analysis of described in the previous section, rapid testing is one promising alternative for the eradication of COVID-19. Therefore, we simulated the results of the policy to relax the strict social distancing rules combined with a more rapid test intervention. To simulate this scenario, we use the same β as in (11), but increasing the rapid testing and hospitalization rate twice larger. The results are shown in Fig. 10 . It can be seen that increasing rapid tests and hospitalization as a tolerance policy of relaxing the social distancing rules succeds in reducing the number of the infected population. Unfortunately, when the social distancing completely stops (after July 27), then the effect of rapid test and hospitalization is no longer able to compensate for the impact of relaxing the strict social distancing for the purpose of reducing the spread of COVID-19. Therefore, the number of the infected populations will start to re-increase and produce a new outbreak.
Fig. 10

Long-time simulation for prediction of incidence of COVID-19 in Jakarta with easing the social distancing policy combined with more massive rapid test and hospitalization.

Long-time simulation for prediction of incidence of COVID-19 in Jakarta with easing the social distancing policy combined with more massive rapid test and hospitalization.

Conclusions

A new deterministic compartmental model was constructed in this study to evaluate the spreading of COVID-19 among the human population. The model considers many important factors, such as hidden cases, rapid testing to trace hidden cases, limitation of medical resources, social distancing, quarantine/isolation, and parameter estimation for the incidence date from the city of Jakarta, Indonesia. The model consisted of six variables and was rigorously analyzed. A qualitative analysis of the model showed the following results. The model exhibits two types of equilibrium points: COVID-19 free and COVID-19 endemic. The local stability of each equilibrium point depends on the basic reproduction number . We found that the COVID-19-free equilibrium point is always locally asymptotically stable if is less than unity. A COVID-19-endemic equilibrium point always exists when is larger than unity. The model undergoes a backward bifurcation phenomenon at the associated is equal to one , whenever the saturation parameter for hospitalization (b) is larger than a specific threshold (b*). This means that whenever the medical resources are insufficient (larger b), the risk of the appearance of a backward bifurcation increases; this is related to the existence of the COVID-19-endemic equilibrium despite . Therefore, the success of the intervention also depends on the initial condition when the interventions is implemented. The study shows that increasing the capacity of a hospital or providing a considerably better quality of treatment in the hospital increases the probability of avoiding a backwardbifurcation. Numerical experiments of the model based on the incidence data of the city of Jakarta suggest the following. The basic reproduction number in Jakarta during the early spread of COVID-19 is 1.75, which is larger than unity. This means that COVID-19 will persist in the population if no intervention is implemented by the government or the community. From an analysis of the elasticity of we observe that the infection rate (β) is the most significant controllable parameter to reduce followed by the effectiveness of self-isolation and quarantine. Smaller values of these mentioned parameters will reduce thereby increasing the chance of eradicating COVID-19 from the community. The government must be careful when relaxing the policy of strict social distancing, particularly in terms of when it should be initiated. Mistakes in the prediction of when to start relaxing the social distancing policy can affect the emergence of a second outbreak. A rapid test-based intervention has been proven to have potential in reducing as an alternative approach, instead of relying solely on a lockdown or strict social distancing. Significantly better results might be obtained if these interventions can be implemented simultaneously. During this pandemic, it is important to avoid overconfidence in the capabilities of the model for the long term prediction of the data. Many assumptions were made in the study to simplify the model without compromising the main objective. Although many important qualitative features were found from the model applied in this study, several limitations can still be found, and an alternative way to improve the model should be developed. One of the limitations in this study is that the applied model does not include the spatial spread of COVID-19 and the possibility of a relapse for recovered individuals. Further research is required in this field to address this limitation and a better modeling is needed to understand and anticipate the outcome of the COVID-19 pandemic.

Funding

author is funded by with PUTI KI Q2 research grant scheme, ID No : NKB-775/UN2.RST/HKP.05.00/2020.

CRediT authorship contribution statement

Dipo Aldila: Conceptualization, Methodology, Formal analysis, Software, Investigation, Validation, Writing - original draft, Writing - review & editing. Sarbaz H.A. Khoshnaw: Software, Conceptualization, Writing - original draft. Egi Safitri: Formal analysis, Investigation, Writing - original draft. Yusril Rais Anwar: Software, Investigation. Aanisah R.Q. Bakry: Software, Data curation. Brenda M. Samiadji: Investigation, Validation, Writing - original draft. Demas A. Anugerah: Software, Conceptualization, Writing - original draft. M. Farhan Alfarizi GH: Data curation, Validation. Indri D. Ayulani: Writing - original draft, Data curation. Sheryl N. Salim: Investigation, Data curation.

Declaration of Competing Interest

The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper.
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