Literature DB >> 3282559

Temperature adaptation of lactate dehydrogenase. Structural, functional and genetic aspects.

H Zuber1.   

Abstract

Comparison of the primary structures of thermophilic, mesophilic and psychrophilic lactate dehydrogenase (LDH) reveals a multitude of temperature-related amino acid substitutions. In the substitutions amino acid residues occurring preferentially in thermophilic, mesophilic (psychrophilic) LDH were found. On this basis, amino acid residues could be classified in an order from typical thermophilic (thermostabilizing) to typical mesophilic (thermolabilizing, increasing dynamics of the enzyme molecule) residues. The temperature-dependent ratio between thermostabilizing and thermolabilizing amino acid residues forms the basis for the specific structural and functional properties of thermophilic or mesophilic LDH. It is interesting that there appears to be a relationship between this order from thermophilic to mesophilic amino acid residues and the type of bases coding for these individual residues in the translation step of protein biosynthesis. Temperature-related amino acid substitutions are based on temperature-related base substitutions. A possible mechanism of temperature adaptation of LDH through alternative selection of thermophilic and mesophilic amino acid residues at the level of tRNA (anticodon)-mRNA (codon) interactions is discussed. These temperature-adaptation processes are evolutionary events in which the evolution and structure of the genetic code are involved.

Entities:  

Mesh:

Substances:

Year:  1988        PMID: 3282559     DOI: 10.1016/0301-4622(88)87037-6

Source DB:  PubMed          Journal:  Biophys Chem        ISSN: 0301-4622            Impact factor:   2.352


  17 in total

1.  Structural prediction of a novel chitinase from the psychrophilic Glaciozyma antarctica PI12 and an analysis of its structural properties and function.

Authors:  Aizi Nor Mazila Ramli; Nor Muhammad Mahadi; Mohd Shahir Shamsir; Amir Rabu; Kwee Hong Joyce-Tan; Abdul Munir Abdul Murad; Rosli Md Illias
Journal:  J Comput Aided Mol Des       Date:  2012-06-19       Impact factor: 3.686

2.  Dynamics and unfolding pathways of a hyperthermophilic and a mesophilic rubredoxin.

Authors:  T Lazaridis; I Lee; M Karplus
Journal:  Protein Sci       Date:  1997-12       Impact factor: 6.725

3.  Structural prediction of a novel laminarinase from the psychrophilic Glaciozyma antarctica PI12 and its temperature adaptation analysis.

Authors:  Sepideh Parvizpour; Jafar Razmara; Ashraf Fadhil Jomah; Mohd Shahir Shamsir; Rosli Mohd Illias
Journal:  J Mol Model       Date:  2015-02-27       Impact factor: 1.810

Review 4.  Multifactorial level of extremostability of proteins: can they be exploited for protein engineering?

Authors:  Debamitra Chakravorty; Mohd Faheem Khan; Sanjukta Patra
Journal:  Extremophiles       Date:  2017-03-10       Impact factor: 2.395

Review 5.  Thermal adaptation of α-amylases: a review.

Authors:  Kalpana Hiteshi; Reena Gupta
Journal:  Extremophiles       Date:  2014-08-13       Impact factor: 2.395

6.  Structural and functional analysis of a novel psychrophilic β-mannanase from Glaciozyma antarctica PI12.

Authors:  Sepideh Parvizpour; Jafar Razmara; Aizi Nor Mazila Ramli; Rosli Md Illias; Mohd Shahir Shamsir
Journal:  J Comput Aided Mol Des       Date:  2014-05-22       Impact factor: 3.686

Review 7.  Thermostable marine microbial proteases for industrial applications: scopes and risks.

Authors:  Noora Barzkar; Ahmad Homaei; Roohullah Hemmati; Seema Patel
Journal:  Extremophiles       Date:  2018-02-13       Impact factor: 2.395

8.  Stabilization of creatinase from Pseudomonas putida by random mutagenesis.

Authors:  J Schumann; G Böhm; G Schumacher; R Rudolph; R Jaenicke
Journal:  Protein Sci       Date:  1993-10       Impact factor: 6.725

9.  Flagellar structure and hyperthermophily: analysis of a single flagellin gene and its product in Aquifex pyrophilus.

Authors:  W Behammer; Z Shao; W Mages; R Rachel; K O Stetter; R Schmitt
Journal:  J Bacteriol       Date:  1995-11       Impact factor: 3.490

10.  Cloning, sequencing and transcript analysis of the gene encoding formylmethanofuran: tetrahydromethanopterin formyltransferase from the hyperthermophilic Methanothermus fervidus.

Authors:  A Lehmacher
Journal:  Mol Gen Genet       Date:  1994-01
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.