| Literature DB >> 32799914 |
Viet-Linh Nguyen1, Vito Colella1,2, Grazia Greco1, Fang Fang3, Wisnu Nurcahyo4, Upik Kesumawati Hadi5, Virginia Venturina6, Kenneth Boon Yew Tong7, Yi-Lun Tsai8, Piyanan Taweethavonsawat9, Saruda Tiwananthagorn10, Sahatchai Tangtrongsup10, Thong Quang Le11, Khanh Linh Bui12, Thom Do13, Malaika Watanabe14, Puteri Azaziah Megat Abd Rani14, Filipe Dantas-Torres1,15, Lenaig Halos16, Frederic Beugnet16, Domenico Otranto17,18.
Abstract
BACKGROUND: Ticks and fleas are considered amongst the most important arthropod vectors of medical and veterinary concern due to their ability to transmit pathogens to a range of animal species including dogs, cats and humans. By sharing a common environment with humans, companion animal-associated parasitic arthropods may potentially transmit zoonotic vector-borne pathogens (VBPs). This study aimed to molecularly detect pathogens from ticks and fleas from companion dogs and cats in East and Southeast Asia.Entities:
Keywords: Asia; Cats; Companion animals; Dogs; Fleas; Ticks; Vector-borne pathogens; Zoonotic
Mesh:
Year: 2020 PMID: 32799914 PMCID: PMC7429691 DOI: 10.1186/s13071-020-04288-8
Source DB: PubMed Journal: Parasit Vectors ISSN: 1756-3305 Impact factor: 3.876
Primers, target genes and PCR conditions used in this study
| Pathogen | Primer (5’-3’) | Target gene | Product size (bp) | PCR protocol | Reference |
|---|---|---|---|---|---|
| Piroplasmid-F: CCAGCAGCCGCGGTAATTC | 350–400 | 95 °C for 10 min initial denaturation, followed by 35 cycles of 95 °C for 30 s, 64 °C for 20 s, 72 °C for 20 s, then 72 °C for 7 min for the final elongation | [ | ||
| Piroplasmid-R: CTTTCGCAGTAGTTYGTCTTTAACAAATCT | |||||
| EHR16SD: GGTACCYACAGAAGAAGTCC | 345 | 95 °C for 10 min initial denaturation, followed by 35 cycles of 95 °C for 30 s, 60 °C for 30 s, 72 °C for 30 s, then 72 °C for 10 min for the final elongation | [ | ||
| EHR16SR: TAGCACTCATCGTTTACA GC | |||||
| Trans-1: TATGTATCCACCGTAGCCAGT | 687 | 95 °C for 10 min initial denaturation, followed by 35 cycles of 95 °C for 30 s, 64 °C for 60 s, 72 °C for 60 s, then 72 °C for 7 min for the final elongation | [ | ||
| Trans-2: CCCAACAACACCTCCTTATTC | |||||
| ssrA-F: GCTATGGTAATAAATGGACAATGAAATAA | 301 | 95 °C for 2 min initial denaturation, followed by 45 cycles of 95 °C for 15 s, 60 °C for 60 s | [ | ||
| ssrA-R: GCTTCTGTTGCCAGGTG | |||||
| Probe: FAM-ACCCCGCTTAAACCTGCGACG | |||||
| CS-78F: GCAAGTATCGGTGAGGATGTAAT | 401 | 95 °C for 10 min initial denaturation, followed by 40 cycles of 95 °C for 30 s, 58 °C for 30 s, 72 °C for 40 s, then 72 °C for 7 min for the final elongation | [ | ||
| CS-323R: GCTTCCTTAAAATTCAATAAATCAGGAT | |||||
| Spotted fever group rickettsiae | Rr190.70F: ATGGCGAATATTTCTCCAAAA | 632 | 95 °C for 10 min initial denaturation, followed by 35 cycles of 94 °C for 40 s, 58 °C for 30 s, 72 °C for 45 s, then 72 °C for 10 min for the final elongation | [ | |
| Rr190.701R: GTTCCGTTAATGGCAGCATCT |
Pathogens detected in ticks according to their species, developmental stage, sex and host in East and Southeast Asia
| Apicomplexan protozoans | |||||||
|---|---|---|---|---|---|---|---|
| China ( | 1 | ||||||
| C; | |||||||
| D; | |||||||
| D; | |||||||
| D; | 1F | ||||||
| Indonesia ( | 2 | 1 | |||||
| C; | 1F | ||||||
| D; | 1F | 1F | |||||
| D; | |||||||
| Malaysia ( | 2 | 1 | |||||
| D; | 1F, 1M | 1M | |||||
| The Philippines ( | 2 | 1 | 12 | ||||
| C; | 1N, 1F | 1N, 1M | |||||
| D; | 1M | 1N, 2F, 7M | |||||
| Singapore ( | |||||||
| C; | |||||||
| Taiwan ( | 1 | 2 | 1 | ||||
| C; | |||||||
| D; | 1F, 1M | ||||||
| D; | 1M | 1F | |||||
| Thailand ( | 3 | 1 | |||||
| D; | |||||||
| D; | |||||||
| D; | 1F, 2M | 1F | |||||
| Vietnam ( | 3 | 6 | |||||
| D; | 2F, 1M | 5F, 1M | |||||
| Total | 3 | 7 | 1 | 1 | 2 | 4 | 21 |
Abbreviations: C, cat; D, dog; L, larva; N, nymph; M, adult male; F, adult female
aThis female tick was reported as “Ixodes sp.” in [10]. Following reassessment of photomicrography images of this tick by one of the co-authors (F.D.-T.) the following morphological features were observed: auriculae and cornua present; porose area small, not contiguous, hypostome with a 2/2 dental formula on almost the entire hypostome; coxa I with slight internal spur, coxae III and IV each with external spur; syncoxae present on coxae I and II; trochanters lacking spurs. As such, this female shares several morphological features with Ixodes ovatus [46], but genetic data from a partial 16S rDNA sequence (percent identity: 90.7% with U95900) suggest that this may belong to a distinct species
Pathogens detected in fleas according to their species, developmental stage, sex and host in East and Southeast Asia
| “ | ||||
|---|---|---|---|---|
| China ( | 1 | 2 | ||
| C; | 1F | 2F | ||
| D; | ||||
| Indonesia ( | 12 | 9 | 21 | |
| C; | 7F, 2M | 18F | ||
| C; | 1M | |||
| D; | 2F | 2F | ||
| D; | 1M | 7F, 2M | ||
| Malaysia ( | ||||
| C; | ||||
| D; | ||||
| The Philippines ( | 20 | 9 | 4 | |
| C; | 4F, 3M | 3F, 1M | ||
| D; | 12F, 1M | 1F | ||
| D; | 8F | |||
| Singapore ( | 2 | |||
| C; | 1M | |||
| C; | 1F | |||
| Taiwan ( | 8 | 4 | ||
| C; | 3F, 2M | 3F, 1M | ||
| D; | 3F | |||
| D; | ||||
| Thailand ( | 1 | 4 | 1 | 5 |
| C; | 2F | |||
| D; | 1F | 1F | ||
| D; | 2F, 2M | 1M | 1F, 1M | |
| Vietnam ( | 6 | 5 | 3 | |
| C; | 3F, 1M | 3F | ||
| D; | 2F | |||
| D; | 4F, 1M | |||
| Total | 48 | 27 | 1 | 41 |
Abbreviations: C, cat; D, dog; F, female; M, male
Fig. 1Phylogenetic relationships of Rickettsia spp. isolated in this study (in bold) to other Rickettsia spp. based on partial sequences of the ompA gene. The analyses were performed using a Maximum Likelihood method with Tamura 3-parameter model. A discrete Gamma distribution was used to model evolutionary rate differences among sites. GenBank accession number, isolation source and country of origin are presented for each sequence
Fig. 2Phylogenetic relationships of Rickettsia spp. isolated in this study (in bold) to other Rickettsia spp. based on partial sequences of the gltA gene. The analyses were performed using a Maximum Likelihood method with Tamura 3-parameter model. A discrete Gamma distribution was used to model evolutionary rate differences among sites. GenBank accession number, isolation source and country of origin are presented for each sequence
Fig. 3Phylogenetic relationships of the present Rhipicephalus sanguineus (s.l.) sequences (in bold) to other Rhipicephalus spp. based on a portion of the mitochondrial 16S rRNA gene. As most sequences (n = 34) were identified as belonging to the tropical lineage Rh. sanguineus (s.l.), representatives were selected for each country. The analyses were performed using a Maximum Likelihood method with Tamura 3-parameter model. A discrete Gamma distribution was used to model evolutionary rate differences among sites. GenBank accession number, isolation source and country of origin are presented for each sequence