Literature DB >> 32795385

Potential Role of Social Distancing in Mitigating Spread of Coronavirus Disease, South Korea.

Sang Woo Park, Kaiyuan Sun, Cécile Viboud, Bryan T Grenfell, Jonathan Dushoff.   

Abstract

In South Korea, the coronavirus disease outbreak peaked at the end of February and subsided in mid-March. We analyzed the likely roles of social distancing in reducing transmission. Our analysis indicated that although transmission might persist in some regions, epidemics can be suppressed with less extreme measures than those taken by China.

Entities:  

Keywords:  COVID-19; Coronavirus disease; SARS-CoV-2; South Korea; pneumonia; respiratory diseases; severe acute respiratory syndrome coronavirus 2; social distancing; viruses; zoonoses

Mesh:

Year:  2020        PMID: 32795385      PMCID: PMC7588540          DOI: 10.3201/eid2611.201099

Source DB:  PubMed          Journal:  Emerg Infect Dis        ISSN: 1080-6040            Impact factor:   6.883


The first coronavirus disease (COVID-19) case in South Korea was confirmed on January 20, 2020 (). In the city of Daegu, the disease spread rapidly within a church community after the city’s first case was reported on February 18 (). Chains of transmission that began from this cluster distinguish the epidemic in South Korea from that in any other country. As of March 16, a total of 8,236 cases were confirmed, of which 61% were related to the church (). The Daegu Metropolitan Government implemented several measures to prevent the spread of COVID-19. On February 20, the Daegu Metropolitan Government recommended wearing masks in everyday life and staying indoors (). On February 23, South Korea raised its national alert level to the highest level () and delayed the start of school semesters (). Intensive testing and contact tracing enabled rapid identification and isolation of case-patients and reduction of onward transmission (). We describe potential roles of social distancing in mitigating COVID-19 spread in South Korea by comparing metropolitan traffic data with transmission in 2 major cities.

The Study

We analyzed epidemiologic data describing the COVID-19 outbreak in South Korea during January 20–March 16. We transcribed daily numbers of reported cases in each municipality from Korea Centers for Disease Control and Prevention (KCDC) press releases (). We also transcribed partial line lists from press releases by KCDC and municipal governments. All data and code are stored in a publicly available GitHub repository (https://github.com/parksw3/Korea-analysis). We compared epidemiologic dynamics of COVID-19 from 2 major cities: Daegu (2020 population: 2.4 million) and Seoul (2020 population: 9.7 million). During January 20–March 16, KCDC reported 6,083 cases from Daegu and 248 from Seoul. The Daegu epidemic was characterized by a single large peak followed by a decrease (Figure 1, panel A); the Seoul epidemic comprised several small outbreaks (Figure 1, panel B).
Figure 1

Comparison of daily epidemiologic and traffic data from Daegu (A) and Seoul (B) during the coronavirus disease (COVID-19) outbreak, South Korea. Black bars indicate no. COVID-19 cases; lines represent daily metropolitan traffic volume in 2020 (red) and mean daily metropolitan traffic volume during 2017–2019 (black). Daily traffic from previous years have been shifted by 1–3 days to align day of the weeks. Vertical dashed lines indicate February 18, 2020, when the first COVID-19 case was confirmed in Daegu. Gray bars indicate weekends.

Comparison of daily epidemiologic and traffic data from Daegu (A) and Seoul (B) during the coronavirus disease (COVID-19) outbreak, South Korea. Black bars indicate no. COVID-19 cases; lines represent daily metropolitan traffic volume in 2020 (red) and mean daily metropolitan traffic volume during 2017–2019 (black). Daily traffic from previous years have been shifted by 1–3 days to align day of the weeks. Vertical dashed lines indicate February 18, 2020, when the first COVID-19 case was confirmed in Daegu. Gray bars indicate weekends. We obtained the daily number of persons who boarded the subway or monorail in Daegu and Seoul during 2017–2020. For Daegu, we used data from https://data.go.kr for lines 1–3; for Seoul, we used data from https://data.seoul.go.kr for lines 1–9 (Figure 1). Soon after the first church-related case was reported, traffic volume decreased by »80% in Daegu and »50% in Seoul. To our knowledge, KCDC first recommended social distancing on February 29 (), and no official guidelines existed regarding public transportation, which suggests that distancing was, at least in part, voluntary. We reconstructed the time series of a proxy for incidence of infection I, representing the number of persons who became infected at time t and reported later, and estimated the instantaneous reproduction number, R, defined as the average number of secondary infections caused by an infected person, given conditions at time t (). We adjusted the daily number of reported cases to account for changes in testing criteria and censoring bias (Appendix) and then sampled infection dates using inferred onset-to-confirmation delay distributions from the partial line list (Appendix) and previous estimated incubation period distribution (Table) to obtain our incidence proxy, I. Finally, we estimated R on the basis of the renewal equation ():where w is the generation-interval distribution randomly drawn from a prior distribution (Table). We weighted each sample of R using a gamma probability distribution with a mean of 2.6 and a SD ± 2 to reflect prior knowledge (S. Abbott, unpub. data, https://doi.org/10.12688/wellcomeopenres.16006.1) and took weighted quantiles to calculate medians and associated 95% credible intervals. We estimated R for February 2 (14 days after the first confirmed case) through March 10 (after which the effects of censoring were too strong for reliable estimates) (Appendix). All analyses were performed using R version 3.6.1 (https://www.r-project.org).
Table

Assumed incubation and generation-interval distributions in an analysis of the potential role of social distancing in mitigating the spread of coronavirus disease, South Korea, 2020*

DistributionParameterizationPriorsSource
Incubation period distributionGamma (µI, µ2I2)µI » gamma (6.5 d, 145); σ » gamma (2.6 d, 25)(6)
Generation-interval distributionNegative binomial (µG, θ)µG » gamma (5 d, 62); θ » gamma (5, 20)(7,8)

*Gamma distributions are parameterized using its mean and shape. Negative binomial distributions are parameterized using its mean and dispersion. Priors are chosen such that the 95% quantiles of prior means and standard deviations are consistent with previous estimates.

*Gamma distributions are parameterized using its mean and shape. Negative binomial distributions are parameterized using its mean and dispersion. Priors are chosen such that the 95% quantiles of prior means and standard deviations are consistent with previous estimates. We reconstructed incidence proxy (Figure 2, panels A, B) and estimates of R (Figure 2, panels C, D) in Daegu and Seoul. In Daegu, incidence peaked shortly after the first case was confirmed (Figure 2, panel A). In Daegu, symptoms had developed in the first case-patient on February 7; this person had visited the church on February 9 and 16, indicating the disease probably was spreading within the church community earlier (). Likewise, the estimates of R gradually decreased and eventually decreased to <1 approximately 1 week after the first case was reported, coinciding with the decrease in the metropolitan traffic volume (Figure 2, panel C). The initial decrease in R was likely to have been caused by our resampling method for infection times for each reported case, which oversmooths the incidence curve and the R estimates (K. Gostic, unpub. data, https://doi.org/10.1101/2020.06.18.20134858). In Seoul, estimates of R decreased slightly but remained at »1 (Figure 2, panel D), which might be explained by less-intense social distancing. Stronger distancing or further intervention would have been necessary to reduce R to <1 by March 10.
Figure 2

Comparison of reconstructed coronavirus disease incidence proxy and instantaneous reproduction number R in Daegu (A, C) and Seoul (B, D), South Korea. The instantaneous reproduction number R reflects transmission dynamics at time t. Black lines and gray shading represent the median estimates of reconstructed incidence (A, B) and R (C, D) and their corresponding 95% credible intervals. Gray bars show the number of reported cases. Red lines represent the normalized traffic volume (daily traffic, 2020, divided by the mean daily traffic, 2017–2019). Vertical dashed lines indicate February 18, 2020, when the first case was confirmed in Daegu.

Comparison of reconstructed coronavirus disease incidence proxy and instantaneous reproduction number R in Daegu (A, C) and Seoul (B, D), South Korea. The instantaneous reproduction number R reflects transmission dynamics at time t. Black lines and gray shading represent the median estimates of reconstructed incidence (A, B) and R (C, D) and their corresponding 95% credible intervals. Gray bars show the number of reported cases. Red lines represent the normalized traffic volume (daily traffic, 2020, divided by the mean daily traffic, 2017–2019). Vertical dashed lines indicate February 18, 2020, when the first case was confirmed in Daegu. Although we found clear, positive correlations on a daily scale between normalized traffic and the median estimates of R in Daegu (r = 0.93; 95% credible interval 0.86–0.96; Appendix) and Seoul (r = 0.76; 95% credible interval 0.60–0.87; Appendix), these correlations are conflated by time trends and by other measures that could have affected R. We did not find clear signatures of lags in the correlation between R and traffic volume (Appendix Figure 3). Patterns in R were similar in directly adjacent provinces (Gyeongsangbuk-do and Gyeonggi-do), demonstrating the robustness of our analysis (Appendix Figure 4).

Conclusions

The South Korea experience with COVID-19 provides evidence that epidemics can be suppressed with less extreme measures than those taken by China () and demonstrates the necessity of prompt identification and isolation of case-patients in preventing spread (). Our analysis reveals the potential role of social distancing in assisting such efforts. Even though social distancing alone might not prevent spread, it can flatten the epidemic curve (compare Figure 2, panels B, D) and reduce the burden on the healthcare system (). Our study is not without limitations. Because of insufficient data, we could not account for differences in delay distributions or changes in testing capacity among cities; line list data were mostly derived from outside Daegu. Nonetheless, the sensitivity analyses support the robustness of our findings (Appendix Figures 5–8). We were unable to distinguish local and imported cases and thus might have overestimated R (). Conducting a separate analysis for Seoul that accounts for imported cases did not affect our qualitative conclusions (Appendix Figure 9). Finally, although the method of resampling infection time can capture qualitative changes in R, estimates of R can be oversmoothed and should be interpreted with care (K. Gostic, unpub. data, https://doi.org/10.1101/2020.06.18.20134858). Nonetheless, our estimates of R are broadly consistent with previous estimates (). We used metropolitan traffic to quantify the degree of social distancing. The 80% decrease in traffic volume suggests that distancing measures in Daegu might be comparable to those in Wuhan, China (). We were unable to directly estimate the effect of social distancing on population contacts or epidemiologic dynamics. Other measures, such as intensive testing and tracing of core transmission groups, are also likely to have affected transmission dynamics. Our study highlights the importance of considering geographic heterogeneity in estimating epidemic potential. The sharp decrease in Daegu drove the number of reported cases in South Korea. Our analysis revealed that the epidemic remained close to the epidemic threshold in other regions, including Seoul and Gyeonggi-do. Relatively weak distancing might have assisted the recent resurgence of COVID-19 cases in Seoul (E. Shim, G. Chowell, unpub. data, https://doi.org/10.1101/2020.07.21.20158923).

Appendix

Additional methods and results for analysis of the potential role of social distancing in mitigating spread of coronavirus disease, South Korea.
  10 in total

1.  Response to the emerging novel coronavirus outbreak.

Authors:  Ilona Kickbusch; Gabriel Leung
Journal:  BMJ       Date:  2020-01-31

2.  How will country-based mitigation measures influence the course of the COVID-19 epidemic?

Authors:  Roy M Anderson; Hans Heesterbeek; Don Klinkenberg; T Déirdre Hollingsworth
Journal:  Lancet       Date:  2020-03-09       Impact factor: 79.321

3.  Estimating individual and household reproduction numbers in an emerging epidemic.

Authors:  Christophe Fraser
Journal:  PLoS One       Date:  2007-08-22       Impact factor: 3.240

4.  Quantifying SARS-CoV-2 transmission suggests epidemic control with digital contact tracing.

Authors:  Luca Ferretti; Chris Wymant; David Bonsall; Christophe Fraser; Michelle Kendall; Lele Zhao; Anel Nurtay; Lucie Abeler-Dörner; Michael Parker
Journal:  Science       Date:  2020-03-31       Impact factor: 47.728

5.  Improved inference of time-varying reproduction numbers during infectious disease outbreaks.

Authors:  R N Thompson; J E Stockwin; R D van Gaalen; J A Polonsky; Z N Kamvar; P A Demarsh; E Dahlqwist; S Li; E Miguel; T Jombart; J Lessler; S Cauchemez; A Cori
Journal:  Epidemics       Date:  2019-08-26       Impact factor: 4.396

6.  Estimating the generation interval for coronavirus disease (COVID-19) based on symptom onset data, March 2020.

Authors:  Tapiwa Ganyani; Cécile Kremer; Dongxuan Chen; Andrea Torneri; Christel Faes; Jacco Wallinga; Niel Hens
Journal:  Euro Surveill       Date:  2020-04

7.  Effect of Nonpharmaceutical Interventions on Transmission of Severe Acute Respiratory Syndrome Coronavirus 2, South Korea, 2020.

Authors:  Sukhyun Ryu; Seikh Taslim Ali; Cheolsun Jang; Baekjin Kim; Benjamin J Cowling
Journal:  Emerg Infect Dis       Date:  2020-06-02       Impact factor: 6.883

8.  Contact Tracing during Coronavirus Disease Outbreak, South Korea, 2020.

Authors:  Young Joon Park; Young June Choe; Ok Park; Shin Young Park; Young-Man Kim; Jieun Kim; Sanghui Kweon; Yeonhee Woo; Jin Gwack; Seong Sun Kim; Jin Lee; Junghee Hyun; Boyeong Ryu; Yoon Suk Jang; Hwami Kim; Seung Hwan Shin; Seonju Yi; Sangeun Lee; Hee Kyoung Kim; Hyeyoung Lee; Yeowon Jin; Eunmi Park; Seung Woo Choi; Miyoung Kim; Jeongsuk Song; Si Won Choi; Dongwook Kim; Byoung-Hak Jeon; Hyosoon Yoo; Eun Kyeong Jeong
Journal:  Emerg Infect Dis       Date:  2020-07-16       Impact factor: 6.883

9.  The effect of human mobility and control measures on the COVID-19 epidemic in China.

Authors:  Moritz U G Kraemer; Chia-Hung Yang; Bernardo Gutierrez; Chieh-Hsi Wu; Brennan Klein; David M Pigott; Louis du Plessis; Nuno R Faria; Ruoran Li; William P Hanage; John S Brownstein; Maylis Layan; Alessandro Vespignani; Huaiyu Tian; Christopher Dye; Oliver G Pybus; Samuel V Scarpino
Journal:  Science       Date:  2020-03-25       Impact factor: 47.728

10.  Incubation period of 2019 novel coronavirus (2019-nCoV) infections among travellers from Wuhan, China, 20-28 January 2020.

Authors:  Jantien A Backer; Don Klinkenberg; Jacco Wallinga
Journal:  Euro Surveill       Date:  2020-02
  10 in total
  10 in total

1.  Impact of coronavirus disease 2019 on respiratory surveillance and explanation of high detection rate of human rhinovirus during the pandemic in the Republic of Korea.

Authors:  Heui Man Kim; Eun Jung Lee; Nam-Joo Lee; Sang Hee Woo; Jeong-Min Kim; Jee Eun Rhee; Eun-Jin Kim
Journal:  Influenza Other Respir Viruses       Date:  2021-08-18       Impact factor: 5.606

2.  Sociodemographic and Policy Factors Associated with the Transmission of COVID-19: Analyzing Longitudinal Contact Tracing Data from a Northern Chinese City.

Authors:  Han Liu; Zai Liang; Shiyong Zhang; Lihua Liu
Journal:  J Urban Health       Date:  2022-05-31       Impact factor: 5.801

3.  Analysis of SARS-CoV-2 Transmission in Different Settings, Brunei.

Authors:  Liling Chaw; Wee Chian Koh; Sirajul Adli Jamaludin; Lin Naing; Mohammad Fathi Alikhan; Justin Wong
Journal:  Emerg Infect Dis       Date:  2020-10-09       Impact factor: 6.883

4.  Transmission heterogeneities, kinetics, and controllability of SARS-CoV-2.

Authors:  Wei Wang; Lidong Gao; Cécile Viboud; Hongjie Yu; Kaiyuan Sun; Yan Wang; Kaiwei Luo; Lingshuang Ren; Zhifei Zhan; Xinghui Chen; Shanlu Zhao; Yiwei Huang; Qianlai Sun; Ziyan Liu; Maria Litvinova; Alessandro Vespignani; Marco Ajelli
Journal:  Science       Date:  2020-11-24       Impact factor: 47.728

5.  Impact of Social Distancing Due to Coronavirus Disease 2019 on the Changes in Glycosylated Hemoglobin Level in People with Type 2 Diabetes Mellitus.

Authors:  Sung-Don Park; Sung-Woo Kim; Jun Sung Moon; Yin Young Lee; Nan Hee Cho; Ji-Hyun Lee; Jae-Han Jeon; Yeon-Kyung Choi; Mi Kyung Kim; Keun-Gyu Park
Journal:  Diabetes Metab J       Date:  2020-12-04       Impact factor: 5.376

6.  Effect of fever or respiratory symptoms on leaving without being seen during the COVID-19 pandemic in South Korea.

Authors:  Dohyung Kim; Weon Jung; Jae Yong Yu; Hansol Chang; Se Uk Lee; Taerim Kim; Sung Yeon Hwang; Hee Yoon; Tae Gun Shin; Min Seob Sim; Ik Joon Jo; Won Chul Cha
Journal:  Clin Exp Emerg Med       Date:  2022-03-31

7.  Analyzing the Effect of Social Distancing Policies on Traffic at Sinchon Station, South Korea, during the COVID-19 Pandemic in 2020 and 2021.

Authors:  Nam-Gun Kim; Hyeri Jang; Seungkeun Noh; Ju-Hee Hong; Jongsoon Jung; Jinho Shin; Yongseung Shin; Jongseong Kim
Journal:  Int J Environ Res Public Health       Date:  2022-07-13       Impact factor: 4.614

8.  Using Proper Mean Generation Intervals in Modeling of COVID-19.

Authors:  Xiujuan Tang; Salihu S Musa; Shi Zhao; Shujiang Mei; Daihai He
Journal:  Front Public Health       Date:  2021-07-05

9.  Effect of Non-lockdown Social Distancing and Testing-Contact Tracing During a COVID-19 Outbreak in Daegu, South Korea, February to April 2020: A Modeling Study.

Authors:  Yi-Hsuan Chen; Chi-Tai Fang; Yu-Ling Huang
Journal:  Int J Infect Dis       Date:  2021-07-29       Impact factor: 3.623

10.  Pathogenesis, Symptomatology, and Transmission of SARS-CoV-2 through Analysis of Viral Genomics and Structure.

Authors:  Halie M Rando; Adam L MacLean; Alexandra J Lee; Ronan Lordan; Sandipan Ray; Vikas Bansal; Ashwin N Skelly; Elizabeth Sell; John J Dziak; Lamonica Shinholster; Lucy D'Agostino McGowan; Marouen Ben Guebila; Nils Wellhausen; Sergey Knyazev; Simina M Boca; Stephen Capone; Yanjun Qi; YoSon Park; David Mai; Yuchen Sun; Joel D Boerckel; Christian Brueffer; James Brian Byrd; Jeremy P Kamil; Jinhui Wang; Ryan Velazquez; Gregory L Szeto; John P Barton; Rishi Raj Goel; Serghei Mangul; Tiago Lubiana; Anthony Gitter; Casey S Greene
Journal:  mSystems       Date:  2021-10-26       Impact factor: 6.496

  10 in total

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