Literature DB >> 32794272

Efficient sampling for polynomial chaos-based uncertainty quantification and sensitivity analysis using weighted approximate Fekete points.

Kyle M Burk1,2, Akil Narayan3,4, Joseph A Orr1,2.   

Abstract

Performing uncertainty quantification (UQ) and sensitivity analysis (SA) is vital when developing a patient-specific physiological model because it can quantify model output uncertainty and estimate the effect of each of the model's input parameters on the mathematical model. By providing this information, UQ and SA act as diagnostic tools to evaluate model fidelity and compare model characteristics with expert knowledge and real world observation. Computational efficiency is an important part of UQ and SA methods and thus optimization is an active area of research. In this work, we investigate a new efficient sampling method for least-squares polynomial approximation, weighted approximate Fekete points (WAFP). We analyze the performance of this method by demonstrating its utility in stochastic analysis of a cardiovascular model that estimates changes in oxyhemoglobin saturation response. Polynomial chaos (PC) expansion using WAFP produced results similar to the more standard Monte Carlo in quantifying uncertainty and identifying the most influential model inputs (including input interactions) when modeling oxyhemoglobin saturation, PC expansion using WAFP was far more efficient. These findings show the usefulness of using WAFP based PC expansion to quantify uncertainty and analyze sensitivity of a oxyhemoglobin dissociation response model. Applying these techniques could help analyze the fidelity of other relevant models in preparation for clinical application.
© 2020 John Wiley & Sons Ltd.

Entities:  

Keywords:  approximate Fekete points; cardiovascular modeling; oxyhemoglobin dissociation; polynomial chaos expansion; sensitivity analysis; uncertainty quantification

Year:  2020        PMID: 32794272      PMCID: PMC8138745          DOI: 10.1002/cnm.3395

Source DB:  PubMed          Journal:  Int J Numer Method Biomed Eng        ISSN: 2040-7939            Impact factor:   2.747


  24 in total

1.  Simple accurate mathematical models of blood HbO2 and HbCO2 dissociation curves at varied physiological conditions: evaluation and comparison with other models.

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Journal:  Eur J Appl Physiol       Date:  2015-08-23       Impact factor: 3.078

2.  A guide to uncertainty quantification and sensitivity analysis for cardiovascular applications.

Authors:  Vinzenz Gregor Eck; Wouter Paulus Donders; Jacob Sturdy; Jonathan Feinberg; Tammo Delhaas; Leif Rune Hellevik; Wouter Huberts
Journal:  Int J Numer Method Biomed Eng       Date:  2015-11-26       Impact factor: 2.747

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Journal:  Arch Biochem Biophys       Date:  1969-01       Impact factor: 4.013

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Journal:  J Appl Physiol       Date:  1966-07       Impact factor: 3.531

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Journal:  Arch Biochem Biophys       Date:  1967-07       Impact factor: 4.013

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Journal:  Biochem Biophys Res Commun       Date:  1967-01-23       Impact factor: 3.575

9.  Quantitative determination of carbamino adducts of alpha and beta chains in human adult hemoglobin in presence and absence of carbon monoxide and 2,3-diphosphoglycerate.

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Authors:  Ranjan K Dash; James B Bassingthwaighte
Journal:  Ann Biomed Eng       Date:  2010-04       Impact factor: 3.934

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Authors:  Jake Bergquist; Lindsay Rupp; Brian Zenger; James Brundage; Anna Busatto; Rob S MacLeod
Journal:  Hearts (Basel)       Date:  2021-11-05

2.  A Computational Framework for Atrioventricular Valve Modeling Using Open-Source Software.

Authors:  Wensi Wu; Stephen Ching; Steve A Maas; Andras Lasso; Patricia Sabin; Jeffrey A Weiss; Matthew A Jolley
Journal:  J Biomech Eng       Date:  2022-10-01       Impact factor: 1.899

3.  Uncertainty Quantification of the Effects of Segmentation Variability in ECGI.

Authors:  Jess D Tate; Wilson Good; Nejib Zemzemi; Machteld Boonstra; Peter van Dam; Dana H Brooks; Akil Narayan; Rob S MacLeod
Journal:  Funct Imaging Model Heart       Date:  2021-06-18
  3 in total

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