Literature DB >> 32786158

Combined analysis of transcriptomic and genetic data for the identification of loci involved in glucocorticosteroid response in asthma.

Natalia Hernandez-Pacheco1,2, Mario Gorenjak3, Staša Jurgec3,4, Almudena Corrales1,5, Andrea Jorgensen6, Leila Karimi7, Susanne J Vijverberg8,9,10, Vojko Berce3,11, Maximilian Schieck12,13, Marialbert Acosta-Herrera14, Martin Kerick14, Lesly-Anne Samedy-Bates15,16, Roger Tavendale17, Jesús Villar5,18,19, Somnath Mukhopadhyay17,20, Munir Pirmohamed21, Katia M C Verhamme7, Michael Kabesch12, Daniel B Hawcutt22,23, Steve Turner24, Colin N Palmer17, Esteban G Burchard15,16, Anke H Maitland-van der Zee8,9,10, Carlos Flores1,5,25,26, Uroš Potočnik3,4, Maria Pino-Yanes1,2,5,26.   

Abstract

Entities:  

Keywords:  asthma treatment; childhood asthma; exacerbations; genetic polymorphism; pharmacogenomics

Mesh：

Year:  2020        PMID： 32786158      PMCID： PMC7908891          DOI： 10.1111/all.14552

Source DB:  PubMed          Journal:  Allergy        ISSN： 0105-4538            Impact factor:   13.146


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  9 in total

Review 1.  Latent TGF-beta binding proteins: extracellular matrix association and roles in TGF-beta activation.

Authors:  Marko Hyytiäinen; Carita Penttinen; Jorma Keski-Oja
Journal:  Crit Rev Clin Lab Sci       Date:  2004       Impact factor: 6.250

2.  Leveraging Polygenic Functional Enrichment to Improve GWAS Power.

Authors:  Gleb Kichaev; Gaurav Bhatia; Po-Ru Loh; Steven Gazal; Kathryn Burch; Malika K Freund; Armin Schoech; Bogdan Pasaniuc; Alkes L Price
Journal:  Am J Hum Genet       Date:  2018-12-27       Impact factor: 11.025

3.  Fibulin-1c regulates transforming growth factor-β activation in pulmonary tissue fibrosis.

Authors:  Gang Liu; Marion A Cooley; Andrew G Jarnicki; Theo Borghuis; Prema M Nair; Gavin Tjin; Alan C Hsu; Tatt Jhong Haw; Michael Fricker; Celeste L Harrison; Bernadette Jones; Nicole G Hansbro; Peter A Wark; Jay C Horvat; W Scott Argraves; Brian G Oliver; Darryl A Knight; Janette K Burgess; Philip M Hansbro
Journal:  JCI Insight       Date:  2019-07-25

4.  Genome-wide association study of inhaled corticosteroid response in admixed children with asthma.

Authors:  Natalia Hernandez-Pacheco; Niloufar Farzan; Ben Francis; Leila Karimi; Katja Repnik; Susanne J Vijverberg; Patricia Soares; Maximilian Schieck; Mario Gorenjak; Erick Forno; Celeste Eng; Sam S Oh; Lina Pérez-Méndez; Vojko Berce; Roger Tavendale; Lesly-Anne Samedy; Scott Hunstman; Donglei Hu; Kelley Meade; Harold J Farber; Pedro C Avila; Denise Serebrisky; Shannon M Thyne; Emerita Brigino-Buenaventura; William Rodriguez-Cintron; Saunak Sen; Rajesh Kumar; Michael Lenoir; Jose R Rodriguez-Santana; Juan C Celedón; Somnath Mukhopadhyay; Uroš Potočnik; Munir Pirmohamed; Katia M Verhamme; Michael Kabesch; Colin N A Palmer; Daniel B Hawcutt; Carlos Flores; Anke H Maitland-van der Zee; Esteban G Burchard; Maria Pino-Yanes
Journal:  Clin Exp Allergy       Date:  2019-02-15       Impact factor: 5.018

5.  Airway fibroblasts in asthma manifest an invasive phenotype.

Authors:  Jennifer L Ingram; Molly J Huggins; Tony D Church; Yuejuan Li; Dave C Francisco; Simone Degan; Rafael Firszt; Denise M Beaver; Njira L Lugogo; Ying Wang; Mary E Sunday; Paul W Noble; Monica Kraft
Journal:  Am J Respir Crit Care Med       Date:  2011-03-25       Impact factor: 21.405

6.  Local apoptosis promotes collagen production by monocyte-derived cells in transforming growth factor β1-induced lung fibrosis.

Authors:  Xueyan Peng; Susan K Mathai; Lynne A Murray; Thomas Russell; Ronald Reilkoff; Qingsheng Chen; Mridu Gulati; Jack A Elias; Richard Bucala; Ye Gan; Erica L Herzog
Journal:  Fibrogenesis Tissue Repair       Date:  2011-05-17

7.  RNA-Seq transcriptome profiling identifies CRISPLD2 as a glucocorticoid responsive gene that modulates cytokine function in airway smooth muscle cells.

Authors:  Blanca E Himes; Xiaofeng Jiang; Peter Wagner; Ruoxi Hu; Qiyu Wang; Barbara Klanderman; Reid M Whitaker; Qingling Duan; Jessica Lasky-Su; Christina Nikolos; William Jester; Martin Johnson; Reynold A Panettieri; Kelan G Tantisira; Scott T Weiss; Quan Lu
Journal:  PLoS One       Date:  2014-06-13       Impact factor: 3.240

8.  Airway Smooth Muscle-Specific Transcriptomic Signatures of Glucocorticoid Exposure.

Authors:  Mengyuan Kan; Cynthia Koziol-White; Maya Shumyatcher; Martin Johnson; William Jester; Reynold A Panettieri; Blanca E Himes
Journal:  Am J Respir Cell Mol Biol       Date:  2019-07       Impact factor: 6.914

Review 9.  Genetic associations of the response to inhaled corticosteroids in asthma: a systematic review.

Authors:  Ozlem Keskin; Niloufar Farzan; Esra Birben; Hayriye Akel; Cagatay Karaaslan; Anke H Maitland-van der Zee; Michael E Wechsler; Susanne J Vijverberg; Omer Kalayci
Journal:  Clin Transl Allergy       Date:  2019-01-09       Impact factor: 5.871
  9 in total
  5 in total

Review 1.  Advances and highlights in biomarkers of allergic diseases.

Authors:  Ismail Ogulur; Yagiz Pat; Ozge Ardicli; Elena Barletta; Lacin Cevhertas; Ruben Fernandez-Santamaria; Mengting Huang; Manal Bel Imam; Jana Koch; Siyuan Ma; Debbie J Maurer; Yasutaka Mitamura; Yaqi Peng; Urszula Radzikowska; Arturo O Rinaldi; Juan Rodriguez-Coira; Pattraporn Satitsuksanoa; Stephan R Schneider; Alexandra Wallimann; Damir Zhakparov; Reihane Ziadlou; Marie-Charlotte Brüggen; Willem van de Veen; Milena Sokolowska; Katja Baerenfaller; Luo Zhang; Mubeccel Akdis; Cezmi A Akdis
Journal:  Allergy       Date:  2021-09-27       Impact factor: 14.710

2.  Multiomics analysis identifies BIRC3 as a novel glucocorticoid response-associated gene.

Authors:  Mengyuan Kan; Avantika R Diwadkar; Haoyue Shuai; Jaehyun Joo; Alberta L Wang; Mei-Sing Ong; Joanne E Sordillo; Carlos Iribarren; Meng X Lu; Natalia Hernandez-Pacheco; Javier Perez-Garcia; Mario Gorenjak; Uroš Potočnik; Esteban G Burchard; Maria Pino-Yanes; Ann Chen Wu; Blanca E Himes
Journal:  J Allergy Clin Immunol       Date:  2021-12-28       Impact factor: 14.290

3.  Dysregulation of Synaptic Signaling Genes Is Involved in Biology of Uterine Leiomyoma.

Authors:  Jovan Krsteski; Mario Gorenjak; Igor But; Maja Pakiž; Uroš Potočnik
Journal:  Genes (Basel)       Date:  2021-07-29       Impact factor: 4.096

Review 4.  Genetic Determinants of Poor Response to Treatment in Severe Asthma.

Authors:  Ricardo G Figueiredo; Ryan S Costa; Camila A Figueiredo; Alvaro A Cruz
Journal:  Int J Mol Sci       Date:  2021-04-20       Impact factor: 5.923

5.  Omics data integration identifies ELOVL7 and MMD gene regions as novel loci for adalimumab response in patients with Crohn's disease.

Authors:  Mario Gorenjak; Mateja Zupin; Gregor Jezernik; Pavel Skok; Uroš Potočnik
Journal:  Sci Rep       Date:  2021-03-09       Impact factor: 4.379
  5 in total

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