Literature DB >> 3278221

Codon usage in Plasmodium falciparum.

A Saul1, D Battistutta.   

Abstract

The codon frequencies used in 7874 codons from 17 sequences of Plasmodium falciparum have been examined. The frequency distribution is markedly biased. A and C occur with similar frequency in all positions but G is predominantly in the first base and T is predominantly in the last position. This information can be used to predict the coding strand and reading frame of P. falciparum genes.

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Year:  1988        PMID： 3278221     DOI： 10.1016/0166-6851(88)90022-9

Source DB:  PubMed          Journal:  Mol Biochem Parasitol        ISSN： 0166-6851            Impact factor:   1.759


  23 in total

1.  Hybridization arrest of cell-free translation of the malarial dihydrofolate reductase/thymidylate synthase mRNA by anti-sense oligodeoxyribonucleotides.

Authors:  C Sartorius; R M Franklin
Journal:  Nucleic Acids Res       Date:  1991-04-11       Impact factor: 16.971

2.  Codon usage in pathogenic Entamoeba histolytica.

Authors:  E Tannich; R D Horstmann
Journal:  J Mol Evol       Date:  1992-03       Impact factor: 2.395

3.  Reduced extension temperatures required for PCR amplification of extremely A+T-rich DNA.

Authors:  X Z Su; Y Wu; C D Sifri; T E Wellems
Journal:  Nucleic Acids Res       Date:  1996-04-15       Impact factor: 16.971

4.  Sequence diversity and molecular evolution of the merozoite surface antigen 2 of Plasmodium falciparum.

Authors:  I Felger; V M Marshal; J C Reeder; J A Hunt; C S Mgone; H P Beck
Journal:  J Mol Evol       Date:  1997-08       Impact factor: 2.395

5.  Compositional bias coupled with selection and mutation pressure drives codon usage in Brassica campestris genes.

Authors:  Prosenjit Paul; Arup Kumar Malakar; Supriyo Chakraborty
Journal:  Food Sci Biotechnol       Date:  2017-12-12       Impact factor: 2.391

6.  Expression and characterization of the Plasmodium falciparum haemoglobinase falcipain-3.

Authors:  P S Sijwali; B R Shenai; J Gut; A Singh; P J Rosenthal
Journal:  Biochem J       Date:  2001-12-01       Impact factor: 3.857

7.  Molecular cloning, characterization and localization of PfPK4, an eIF-2alpha kinase-related enzyme from the malarial parasite Plasmodium falciparum.

Authors:  J J Möhrle; Y Zhao; B Wernli; R M Franklin; B Kappes
Journal:  Biochem J       Date:  1997-12-01       Impact factor: 3.857

8.  Plasmodium falciparum translational machinery condones polyadenosine repeats.

Authors:  Slavica Pavlovic Djuranovic; Jessey Erath; Ryan J Andrews; Peter O Bayguinov; Joyce J Chung; Douglas L Chalker; James Aj Fitzpatrick; Walter N Moss; Pawel Szczesny; Sergej Djuranovic
Journal:  Elife       Date:  2020-05-29       Impact factor: 8.140

9.  Gene sequence tags from Plasmodium falciparum genomic DNA fragments prepared by the "genease" activity of mung bean nuclease.

Authors:  G R Reddy; D Chakrabarti; S M Schuster; R J Ferl; E C Almira; J B Dame
Journal:  Proc Natl Acad Sci U S A       Date:  1993-11-01       Impact factor: 11.205

10.  Divergence in codon usage of Lactobacillus species.

Authors:  P H Pouwels; J A Leunissen
Journal:  Nucleic Acids Res       Date:  1994-03-25       Impact factor: 16.971
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