Literature DB >> 32777421

Quantitative approach to study secondary structure of proteins by FT-IR spectroscopy, using a model wheat gluten system.

Mehtap Fevzioglu1, Oguz Kaan Ozturk2, Bruce R Hamaker3, Osvaldo H Campanella4.   

Abstract

Amide I and Amide III vibrational modes are frequently used to study protein secondary structure with Fourier transform infrared (FT-IR) spectroscopy. However, for protein mixtures, neither the sole Amide I nor Amide III region provides sufficient information for structural quantitation because of overlapping peaks, especially in the Amide I region. Here, an improved quantitative approach is proposed to estimate secondary structure of protein systems using resolution enhancement and curve-fitting data processing techniques on a gluten model system to investigate structure-function relationships. Twelve different scenarios were prepared to assign bands in the Amide I region. Frequency ranges of 1660-1640 cm-1 and 1665-1660 cm-1 were found to highly contribute to variability in secondary structure contents of samples. Utilization of the Amide III region as a conducive tool to assign bands in the Amide I region led to a better differentiation of some secondary structural motifs and a more accurate quantitation of protein secondary structure. The study presents an understanding of FT-IR data analysis for a quick technique to assess secondary structures of protein mixtures.
Copyright © 2020. Published by Elsevier B.V.

Entities:  

Keywords:  FT-IR; Gluten; Protein secondary structure

Mesh:

Substances:

Year:  2020        PMID: 32777421     DOI: 10.1016/j.ijbiomac.2020.07.299

Source DB:  PubMed          Journal:  Int J Biol Macromol        ISSN: 0141-8130            Impact factor:   6.953


  4 in total

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4.  Molecular Characterization and SNP-Based Molecular Marker Development of Two Novel High Molecular Weight Glutenin Genes from Triticum spelta L.

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Journal:  Int J Mol Sci       Date:  2022-09-21       Impact factor: 6.208

  4 in total

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