Literature DB >> 32774511

Phylogenetic origins and family classification of typhuloid fungi, with emphasis on Ceratellopsis, Macrotyphula and Typhula (Basidiomycota).

I Olariaga1,2, S Huhtinen3, T Læssøe4, J H Petersen5, K Hansen1.   

Abstract

Typhuloid fungi are a very poorly known group of tiny clavarioid homobasidiomycetes. The phylogenetic position and family classification of the genera targeted here, Ceratellopsis, Macrotyphula, Pterula sensu lato and Typhula, are controversial and based on unresolved phylogenies. Our six-gene phylogeny with an expanded taxon sampling shows that typhuloid fungi evolved at least twice in the Agaricales (Pleurotineae, Clavariineae) and once in the Hymenochaetales. Macrotyphula, Pterulicium and Typhula are nested within the Pleurotineae. The type of Typhula (1818) and Sclerotium (1790), T. phacorrhiza and S. complanatum (synonym T. phacorrhiza), are encompassed in the Macrotyphula clade that is distantly related to a monophyletic group formed by species usually assigned to Typhula. Thus, the correct name for Macrotyphula (1972) and Typhula is Sclerotium and all Typhula species but those in the T. phacorrhiza group need to be transferred to Pistillaria (1821). To avoid undesirable nomenclatural changes, we suggest to conserve Typhula with T. incarnata as type. Clavariaceae is supported as a separate, early diverging lineage within Agaricales, with Hygrophoraceae as a successive sister taxon to the rest of the Agaricales. Ceratellopsis s. auct. is polyphyletic because C. acuminata nests in Clavariaceae and C. sagittiformis in the Hymenochaetales. Ceratellopsis is found to be an earlier name for Pterulicium, because the type, C. queletii, represents Pterulicium gracile (synonym Pterula gracilis), deeply nested in the Pterulicium clade. To avoid re-combining a large number of names in Ceratellopsis we suggest to conserve it with C. acuminata as type. The new genus Bryopistillaria is created to include C. sagittiformis. The families Sarcomyxaceae and Phyllotopsidaceae, and the suborder Clavariineae, are described as new. Six new combinations are proposed and 15 names typified.
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Entities:  

Keywords:  Agaricomycetes; Bryopistillaria Olariaga, Huhtinen, Læssøe, J.H. Petersen & K. Hansen; Bryopistillaria sagittiformis (Pat.) Olariaga, Huhtinen, Læssøe, J.H. Petersen & K. Hansen; Ceratella ferryi Quél. & Fautrey; Clavaria aculina Quél.; Clavaria microscopica Malbr. & Sacc.; Clavariaceae; Clavariineae Olariaga, Huhtinen, Læssøe, J.H. Petersen & K. Hansen; Macrotyphula megasperma (Berthier) Olariaga, Huhtinen, Læssøe, J.H. Petersen & K. Hansen; Macrotyphula phacorrhiza (Reichard: Fr.) Olariaga, Huhtinen, Læssøe, J.H. Petersen & K. Hansen; Phyllotopsidaceae Locquin ex Olariaga, Huhtinen, Læssøe, J.H. Petersen & K. Hansen; Pistillaria aciculata Durieu & Lév. ex Sacc.; Pistillaria aculeata Pat.; Pistillaria acuminata Fuckel; Pistillaria attenuata Syd. & P. Syd.; Pistillaria carestiae Ces. in Bres. & Sacc.; Pistillaria equiseticola Boud.; Pistillaria helenae Pat.; Pistillaria juncicola Bourdot & Galzin; Pistillaria queletii Pat.; Pistillaria sagittiformis Pat.; Pleurotineae; Sarcomyxaceae Olariaga, Huhtinen, Læssøe, J.H. Petersen & K. Hansen; Sclerotium; Sclerotium complanatum Tode; Typhula brunaudii Quél.; Typhula podocarpi (Crous) Olariaga, Huhtinen, Læssøe, J.H. Petersen & K. Hansen; Typhulaceae; basidioma evolution; clavarioid fungi

Year:  2020        PMID: 32774511      PMCID: PMC7388190          DOI: 10.1016/j.simyco.2020.05.003

Source DB:  PubMed          Journal:  Stud Mycol        ISSN: 0166-0616            Impact factor:   16.097


  37 in total

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2.  Trends in morphological evolution in homobasidiomycetes inferred using maximum likelihood: a comparison of binary and multistate approaches.

Authors:  David Hibbett
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3.  Reconstructing the Clavariaceae using nuclear large subunit rDNA sequences and a new genus segregated from Clavaria.

Authors:  Bryn T M Dentinger; David J McLaughlin
Journal:  Mycologia       Date:  2006 Sep-Oct       Impact factor: 2.696

4.  Contributions of rpb2 and tef1 to the phylogeny of mushrooms and allies (Basidiomycota, Fungi).

Authors:  P Brandon Matheny; Zheng Wang; Manfred Binder; Judd M Curtis; Young Woon Lim; R Henrik Nilsson; Karen W Hughes; Valérie Hofstetter; Joseph F Ammirati; Conrad L Schoch; Ewald Langer; Gitta Langer; David J McLaughlin; Andrew W Wilson; Tobias Frøslev; Zai-Wei Ge; Richard W Kerrigan; Jason C Slot; Zhu-Liang Yang; Timothy J Baroni; Michael Fischer; Kentaro Hosaka; Kenji Matsuura; Michelle T Seidl; Jukka Vauras; David S Hibbett
Journal:  Mol Phylogenet Evol       Date:  2006-09-23       Impact factor: 4.286

5.  The origin of red algae: implications for plastid evolution.

Authors:  J W Stiller; B D Hall
Journal:  Proc Natl Acad Sci U S A       Date:  1997-04-29       Impact factor: 11.205

6.  Stable isotope analyses reveal previously unknown trophic mode diversity in the Hymenochaetales.

Authors:  Hailee B Korotkin; Rachel A Swenie; Otto Miettinen; Jessica M Budke; Ko-Hsuan Chen; François Lutzoni; Matthew E Smith; P Brandon Matheny
Journal:  Am J Bot       Date:  2018-10-26       Impact factor: 3.844

Review 7.  After the gold rush, or before the flood? Evolutionary morphology of mushroom-forming fungi (Agaricomycetes) in the early 21st century.

Authors:  David S Hibbett
Journal:  Mycol Res       Date:  2007-01-26

8.  The genome of Laccaria bicolor provides insights into mycorrhizal symbiosis.

Authors:  F Martin; A Aerts; D Ahrén; A Brun; E G J Danchin; F Duchaussoy; J Gibon; A Kohler; E Lindquist; V Pereda; A Salamov; H J Shapiro; J Wuyts; D Blaudez; M Buée; P Brokstein; B Canbäck; D Cohen; P E Courty; P M Coutinho; C Delaruelle; J C Detter; A Deveau; S DiFazio; S Duplessis; L Fraissinet-Tachet; E Lucic; P Frey-Klett; C Fourrey; I Feussner; G Gay; J Grimwood; P J Hoegger; P Jain; S Kilaru; J Labbé; Y C Lin; V Legué; F Le Tacon; R Marmeisse; D Melayah; B Montanini; M Muratet; U Nehls; H Niculita-Hirzel; M P Oudot-Le Secq; M Peter; H Quesneville; B Rajashekar; M Reich; N Rouhier; J Schmutz; T Yin; M Chalot; B Henrissat; U Kües; S Lucas; Y Van de Peer; G K Podila; A Polle; P J Pukkila; P M Richardson; P Rouzé; I R Sanders; J E Stajich; A Tunlid; G Tuskan; I V Grigoriev
Journal:  Nature       Date:  2008-03-06       Impact factor: 49.962

9.  IQ-TREE: a fast and effective stochastic algorithm for estimating maximum-likelihood phylogenies.

Authors:  Lam-Tung Nguyen; Heiko A Schmidt; Arndt von Haeseler; Bui Quang Minh
Journal:  Mol Biol Evol       Date:  2014-11-03       Impact factor: 16.240

10.  Strand-Specific RNA-Seq Analyses of Fruiting Body Development in Coprinopsis cinerea.

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Journal:  PLoS One       Date:  2015-10-28       Impact factor: 3.240

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  2 in total

Review 1.  Evolutionary Morphogenesis of Sexual Fruiting Bodies in Basidiomycota: Toward a New Evo-Devo Synthesis.

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Journal:  Microbiol Mol Biol Rev       Date:  2021-11-24       Impact factor: 13.044

2.  Taxonomy and phylogeny of Resinicium sensu lato from Asia-Pacific revealing a new genus and five new species (Hymenochaetales, Basidiomycota).

Authors:  Jia Yu; Xue-Wei Wang; Shi-Liang Liu; Shan Shen; Li-Wei Zhou
Journal:  IMA Fungus       Date:  2021-07-19       Impact factor: 3.515

  2 in total

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