| Literature DB >> 32761964 |
Amelie Schmolke1, Farah Abi-Akar1, Colleen Roy1, Nika Galic2, Silvia Hinarejos3.
Abstract
In pesticide risk assessments, semifield studies, such as large-scale colony feeding studies (LSCFSs), are conducted to assess potential risks at the honey bee colony level. However, such studies are very cost and time intensive, and high overwintering losses of untreated control hives have been observed in some studies. Honey bee colony models such as BEEHAVE may provide tools to systematically assess multiple factors influencing colony outcomes, to inform study design, and to estimate pesticide impacts under varying environmental conditions. Before they can be used reliably, models should be validated to demonstrate they can appropriately reproduce patterns observed in the field. Despite the recognized need for validation, methodologies to be used in the context of applied ecological models are not agreed on. For the parameterization, calibration, and validation of BEEHAVE, we used control data from multiple LSCFSs. We conducted detailed visual and quantitative performance analyses as a demonstration of validation methodologies. The BEEHAVE outputs showed good agreement with apiary-specific validation data sets representing the first year of the studies. However, the simulations of colony dynamics in the spring periods following overwintering were identified as less reliable. The comprehensive validation effort applied provides important insights that can inform the usability of BEEHAVE in applications related to higher tier risk assessments. In addition, the validation methodology applied could be used in a wider context of ecological models. Environ Toxicol Chem 2020;39:2269-2285.Entities:
Keywords: Calibration; Ecological modeling; Honey bee colony model; Model performance indicators; Overwintering losses; Validation methods
Mesh:
Substances:
Year: 2020 PMID: 32761964 PMCID: PMC7702171 DOI: 10.1002/etc.4839
Source DB: PubMed Journal: Environ Toxicol Chem ISSN: 0730-7268 Impact factor: 3.742
BEEHAVE parameters and inputs altered during calibration to achieve improved match between simulation outputs and colony condition assessment (CCA) data from 2 large‐scale colony feeding studies (LSCFSs) used for calibration
| Parameter group | BEEHAVE parameter | Values tested during calibration | Parameter description | Reason for inclusion in calibration |
|---|---|---|---|---|
| Egg laying | egg_laying_x1 | 150, 175, | Parameters define timing and steepness of seasonal egg‐laying function | Simulated seasonality in egg numbers not matched with CCA data; seasonality of egg laying expected to differ due to climate |
| egg_laying_x2 | 15, 20, | |||
| egg_laying_x3 | 32, | |||
| egg_laying_x4 | 150, | |||
| egg_laying_x5 | 25, | |||
| MAX_EGG_LAYING | 1200, 1400, | Maximum daily egg production | Egg numbers in CCA data highly variable; average exceeded simulated egg numbers | |
| Pollen consumption | DAILY_POLLEN_NEED_ADULT_DRONE | 0.0002, | Daily pollen consumption (mg) by life stage/sex | Alternative daily pollen consumption (mg) rates derived from BeeRex model (US Environmental Protection Agency |
| DAILY_POLLEN_NEED_FORAGER | 0.041, | |||
| DAILY_POLLEN_NEED_IHBEE |
| |||
| DAILY_POLLEN_NEED_LARVA | 6.53, | |||
| DAILY_POLLEN_NEED_LARVA_DRONE | 5.7, | |||
| Brood raising by winter bees | pollenStoreLasting_d |
| Defines pollen collection motivation dependent on pollen stores in the hive | Shifting balance between nectar and pollen collection |
| WINTERBEE_NURSING | TRUE, | Switch between winter bees performing brood nursing according to in‐hive bees (‘TRUE’) or foragers (‘FALSE’) | Physiological changes reported in winter bees allowing them to revert back to conducting in‐hive tasks efficiently (Winston | |
| Nectar and pollen availability and quality in the landscape | Forest/woodland spring resource category | Variable resource category scenarios based on flowering estimates (see Supplemental Data, Table S13) | Defines the bee resource availability and gathering times in patches with forest/woodland land cover (see Supplemental Data, Section 3.3) | Estimates for spring resources particularly uncertain; flowering trees potentially provide high resources |
| Sugar concentration (mol/L) in nectar from noncrop sources | 1, | Sugar concentration in nectar | Sugar concentration is variable dependent on plant species, weather, and other factors; 1.5 mol/L reflects high sugar content | |
| Nectar and pollen availability in noncrop resource categories | Variable availability scenarios dependent on noncrop resource category (see Supplemental Data, Table S14) | Total nectar and pollen available/d from a patch/m2 (see Supplemental Data, Section 3.3) | Nectar and pollen availabilities from nonmass flowering crops based on uncertain estimates | |
| Nectar/pollen gathering times (s) in noncrop resource patches |
| Gathering times define the time needed by a forager in a resource patch to fill its honey crop/pollen baskets (see Supplemental Data, Section 3.3) | Reports of gathering times vary widely in the literature; gathering times impact resource influx to the colony and forager mortality |
BEEHAVE default values are in bold.
Goodness‐of‐fit indicators and area comparison statistics applied to compare apiary‐specific predictions from BEEHAVE simulations with observations from the validation data seta
| Goodness‐of‐fit indicator | Equation | Remarks | References |
|---|---|---|---|
| Normalized mean absolute error (NMAE) |
| Other names used for the same indicator: relative MAE, MARE | Bennett et al. |
| Normalized mean square error (NRMSE) |
| Indicator is very sensitive to outliers; NRMSE ≤0.5 suggested acceptable performance for TKTD models (European Food Safety Authority | Bennett et al. |
| RMSE‐standard deviation ratio (RSR) |
| Indicator of how well the model explains the variance in the observations; indicator is sensitive to outliers | Moriasi et al. |
| Adequacy (A) |
| Indicator takes a high value if the range of observations falls within the range of predictions | Gabsi et al. |
| Reliability (R) |
| Indicator takes a high value if the range of predictions falls within the range of observations | Gabsi et al. |
In the equations, O are the observations, P the predictions, and the mean of the n observations. UL stands for upper limit and LL for lower limit of the ranges of observations and predictions, respectively.
TKTD = toxicokinetic toxicodynamic.
Calibrated parameter values used in BEEHAVE validation simulations, and observed impacts on BEEHAVE simulation outcomes of alterations in parameter values applied in the calibration
| Parameter group | BEEHAVE parameter | Calibrated value | Impact of parameter on BEEHAVE simulation outcomes |
|---|---|---|---|
| Egg laying | egg_laying_x1 | 385 | Improved match with data: extension of egg‐laying season led to higher adult bee numbers in the winter and increased spring colony growth |
| egg_laying_x2 |
| ||
| egg_laying_x3 | 36 | ||
| egg_laying_x4 | 155 | ||
| egg_laying_x5 |
| ||
| MAX_EGG_LAYING |
| Slightly improved match with data: decrease in maximum egg‐laying rate led to slightly lower adult bee numbers in summer and fall; reduced egg‐laying rate may reflect higher mortality in eggs in study colonies | |
| Pollen consumption | DAILY_POLLEN_NEED_ADULT_DRONE |
| Improved match with data: pollen consumption rates derived from BeeRex (US Environmental Protection Agency |
| DAILY_POLLEN_NEED_FORAGER |
| ||
| DAILY_POLLEN_NEED_IHBEE |
| ||
| DAILY_POLLEN_NEED_LARVA |
| ||
| DAILY_POLLEN_NEED_LARVA_DRONE |
| ||
| Brood raising by winter bees | pollenStoreLasting_d |
| Improved match with data: increased pollen collection increased winter bee numbers and spring colony growth |
| WINTERBEE_NURSING | FALSE | No improved match with data: the assumption of higher efficiency in brood nursing by winter bees led to more variable brood and adult numbers in the spring but no consistent improvement in match with study data | |
| Nectar and pollen availability and quality in the landscape | Forest/woodland spring resource category |
| Improved match with data: assuming only high pollen availability in the spring did not have clear impacts on colony spring growth but assuming high nectar and pollen moderately increased spring growth |
| Sugar concentration (mol/L) in nectar from noncrop sources |
| Improved match with data: lower sugar concentration in nectar from noncrop resources led to moderate decrease in summer and fall honey stores as well as small decrease in adult bee numbers | |
| Nectar and pollen availability in noncrop resource categories | Exponential decline in nectar and pollen availability with declining resource category | No improved match with data: increase in resource availability had only very minor impacts on colony dynamics | |
| Nectar/pollen gathering times (s) in noncrop resource patches |
| Improved match with data: considerably reduced adult bee numbers in summer and lower honey stores due to broader range of gathering times dependent on noncrop resource category |
Bold values deviate from BEEHAVE default.
Figure 1Adult bee numbers (left) and honey stores (right) across large‐scale colony feeding studies (LSCFSs) used for BEEHAVE validation. Shaded areas show the range of BEEHAVE outputs across all apiaries and repetitions simulated (110 simulations for LSCFS_2013_1; 120 simulations for all other LSCFSs). Dots represent the data reported from the colony condition assessments (CCAs). Lines with whiskers mark the range of CCA data across all apiaries and with uncertainty range applied to observations. Vertical dotted lines mark the study initiation. (Note that in LSCFS_2016_1, study initiation occurred over several days across apiaries.)
Figure 2Scatter plots of apiary‐specific colony condition assessment data against BEEHAVE outputs across the 5 studies used for validation. The means of the 2 control colonies/apiary in the studies are compared with the mean outputs from corresponding BEEHAVE simulations (10 repetitions). The black line denotes a perfect match between predictions and observations. DOY = day of year; LSCFS = large‐scale colony feeding studies.
Figure 3Distribution plots of deviations between apiary‐specific colony condition assessment data and BEEHAVE outputs across the 5 studies used for validation. The means of the 2 control colonies/apiary in the studies are compared with the mean outputs from corresponding BEEHAVE simulations (10 repetitions). Deviations >0 correspond to overestimation by BEEHAVE; deviations <0 correspond to underestimation.
Bias in simulated adult bee numbers and honey stores compared with first‐year colony condition assessment data by studya
| Adult bee numbers | Honey stores (kg) | |||
|---|---|---|---|---|
| Study | Absolute bias | % bias | Absolute bias | % bias |
| LSCFS_2013_1 | 1587 | 19 | –0.4 | −5 |
| LSCFS_2014_1 | 7209 | 43 | 0.2 | 1 |
| LSCFS_2014_2 | −79 | 0 | 1.4 | 17 |
| LSCFS_2016_1 | 8032 | 57 | 6.4 | 41 |
| LSCFS_2016_2 | 8610 | 62 | −10.6 | −28 |
Positive numbers denote overpredictions by BEEHAVE, and negative numbers correspond to underpredictions.
LSCFS = large‐scale colony feeding study.
Figure 4Goodness‐of‐fit indicators for adult bee numbers (left) and honey stores (right) comparing first‐year BEEHAVE outputs with large‐scale colony feeding study (LSCFS) data across the validation data set, and by study (including studies used for calibration). Indicator calculation: Ia: colony condition assessment (CCA) data (apiary‐ and CCA‐specific averages) compared with BEEHAVE outputs (average/not corrected for bias); Ib: CCA data (apiary‐ and CCA‐specific averages) compared with BEEHAVE outputs (average/bias‐corrected). IIa: CCA data (apiary‐ and CCA‐specific ranges) compared with BEEHAVE outputs (average/not corrected for bias); IIb: CCA data (apiary‐ and CCA‐specific ranges) compared with BEEHAVE outputs (average/bias‐corrected). Thresholds for NRMSE and RSR proposed for other model types are shown as dashed horizontal lines. NMAE = normalized mean absolute error; NRMSE = normalized mean square error; RSR = RMSE‐standard deviation ratio.
Figure 5Area comparison statistics for adult bee numbers (left) and honey stores (right) comparing first year BEEHAVE outputs with large‐scale colony feeding study (LSCFS) data across the validation data set, and by study (including studies used for calibration). Aa = adequacy, not corrected for bias; Ab = adequacy, bias‐corrected; Ra = reliability, not corrected for bias; Rb = reliability, bias‐corrected.