| Literature DB >> 32751271 |
Hui Jeong An1, Eun Hee Ahn2, Jung Oh Kim1, Chang Soo Ryu1, Han Sung Park1, Sung Hwan Cho1, Ji Hyang Kim2, Woo Sik Lee3, Jung Ryeol Lee4, Young Ran Kim2, Nam Keun Kim1.
Abstract
This paper investigates whether glycoprotein 6 (GP6) gene polymorphisms are a risk factor for recurrent pregnancy loss (RPL) in Korean women. Genotypes were determined by polymerase chain reaction-restriction fragment length polymorphism and real-time polymerase chain reaction amplification. We identified five polymorphisms in the GP6 gene: rs1654410 T>C, rs1671153 T>G, rs1654419 G>A, rs12610286 A>G, and rs1654431 G>A. GP6 rs1654410 CC was associated with decreased RPL risk (adjusted odds ratio = 0.292, 95% confidence interval = 0.105-0.815, p = 0.019), and recessive genotypes were also significantly associated with decreased RPL risk (adjusted odds ratio = 0.348, 95% confidence interval = 0.128-0.944, p = 0.038). GP6 rs1654419 GA was associated with decreased RPL risk (adjusted odds ratio = 0.607, 95% confidence interval = 0.375-0.982, p = 0.042), and dominant genotypes were significantly associated with decreased RPL risk (adjusted odds ratio = 0.563, 95% confidence interval = 0.358-0.885, p = 0.013). Altogether, the genotype frequencies of GP6 rs1654410 T>C and GP6 rs1654419 G>A were significantly different between RPL patients and control participants. Therefore, although GP6 polymorphisms may be useful as biomarkers of RPL, additional studies with heterogeneous cohorts are required to better understand the influence of GP6 and assess its performance as a biomarker.Entities:
Keywords: glycoprotein 6 (GP6); miRNA; platelet; polymorphism; recurrent pregnancy loss
Mesh:
Substances:
Year: 2020 PMID: 32751271 PMCID: PMC7464359 DOI: 10.3390/genes11080862
Source DB: PubMed Journal: Genes (Basel) ISSN: 2073-4425 Impact factor: 4.096
Figure 1Analysis of variance for aPTT, PAI-1, PT, and homocysteine levels according to GP6 polymorphisms (PL ≥ 3). (A) aPTT levels were significantly different (p = 0.047) between GP6 rs12610286 AA (mean ± SD, 32.36 ± 4.30), AG (32.73 ± 3.99), and GG (30.49 ± 3.02). (B) PAI-1 levels were significantly different (p = 0.0003) between GP6 rs12610286 AA (mean ± SD, 11.75 ± 6.01), AG (7.89 ± 4.34), and GG (13.26 ± 4.88). (C) PT (sec) levels were significantly different (p = 0.045) between GP6 rs12610286 AA (mean ± SD, 0.97 ± 0.10), AG (0.94 ± 0.12), and GG (0.95 ± 0.09). (D) Homocysteine levels were significantly different (p = 0.026) between GP6 rs1654410 TT (mean ± SD, 36.54 ± 3.54), TC (37.12 ± 3.88), and CC (35.04 ± 4.31).
Clinical variables in control participants and RPL patients.
| Characteristics | Controls | RPL |
|
|---|---|---|---|
| Age (years) | 32.75 ± 3.84 | 33.20 ± 4.54 | 0.211 |
| BMI (kg/m2) | 21.63 ± 3.44 | 19.77 ± 6.83 | 0.291 |
| Previous pregnancy losses ( | N/A | 3.28 ± 1.83 | |
| Live births ( | 1.71 ± 0.58 | N/A | |
| Mean gestational age (weeks) | 39.14 ± 1.56 | 7.32 ± 2.05 | <0.0001 |
| Homocysteine (µmol/L) | 35.98 ± 4.13 | 37.30 ± 3.36 | |
| Total cholesterol (mg/dL) | N/A | 187.73 ± 49.41 | |
| Uric acid (mg/dL) | N/A | 3.80 ± 0.83 | 0.357 |
| PLT (103/µL) | 242.11 ± 61.86 | 255.43 ± 59.22 | 0.034 |
| PT (sec) | 0.84 ± 0.09 | 0.98 ± 0.09 | <0.0001 |
| PAI-1 (ng/mL) | NA | 10.37 ± 5.70 | |
| aPTT (sec) | 33.05 ± 3.08 | 32.23 ± 4.32 | 0.203 |
| BUN (mg/dL, mean ±SD) | N/A | 9.98 ± 2.76 | |
| Creatinine (mg/dL, mean ±SD) | N/A | 0.72 ± 0.12 | |
| FSH (mIU/mL, mean ±SD) | 8.13 ± 2.80 | 7.51 ± 10.52 | 0.546 |
| LH (mIU/mL, mean ±SD) | 3.38 ± 1.87 | 6.29 ± 12.08 | 0.012 |
| E2 (pg/mL, mean ±SD) | 26.00 ± 14.94 | 35.70 ± 29.45 | 0.001 |
Note: RPL, recurrent pregnancy loss; BMI, body mass index; PLT, platelet count; PT, prothrombin time; PAI-1, plasminogen activator inhibitor-1; aPTT, activated par tial thromboplastin time; BUN, blood urea nitrogen; FSH, follicle-stimulating hormone; LH, luteinizing hormone; E2, estradiol.
Genotype frequencies of glycoprotein 6 (GP6) polymorphisms in the control and RPL patients.
| Genotypes | Controls | PL ≥ 2 | AOR (95% CI) |
|
| Controls | PL ≥ 3 | AOR (95% CI) |
|
| PL ≥ 4 | AOR (95% CI) |
|
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| TT | 88 (40.2) | 189 (48.7) | 1.000 (reference) | 88 (40.2) | 69 (50.0) | 1.000 (reference) | 37 (50.0) | 1.000 (reference) | |||||
| TC | 108 (49.3) | 176 (45.4) | 1.218 (0.737–2.012) | 0.432 | 0.781 | 108 (49.3) | 64 (46.4) | 0.760 (0.488–1.183) | 0.223 | 0.309 | 34 (45.9) | 0.760 (0.440–1.312) | 0.325 |
| CC | 23 (10.5) | 23 (5.9) | 1.285 (0.693–2.385) | 0.446 | 0.511 | 23 (10.5) | 5 (3.6) | 0.292 (0.105–0.815) | 0.019 | 0.095 | 3 (4.1) | 0.338 (0.094–1.209) | 0.095 |
| Dominant (TT vs. TC + CC) | 1.236 (0.766–1.995) | 0.355 | 0.627 | 0.684 (0.444–1.054) | 0.085 | 0.142 | 0.695 (0.408–1.185) | 0.182 | |||||
| Recessive (TT + TC vs. CC) | 1.126 (0.672–1.888) | 0.641 | 0.641 | 0.348 (0.128–0.944) | 0.038 | 0.190 | 0.395 (0.114–1.368) | 0.143 | |||||
| HWE | 0.423 | 0.302 | |||||||||||
| TT | 107 (48.9) | 216 (55.7) | 1.000 (reference) | 107 (48.9) | 74 (53.6) | 1.000 (reference) | 37 (50.0) | 1.000 (reference) | |||||
| TG | 98 (44.7) | 155 (39.9) | 0.788 (0.558–1.113) | 0.176 | 0.781 | 98 (44.7) | 55 (39.9) | 0.826 (0.528–1.291) | 0.401 | 0.401 | 29 (39.2) | 0.879 (0.501–1.543) | 0.653 |
| GG | 14 (6.4) | 17 (4.4) | 0.625 (0.295–1.324) | 0.220 | 0.511 | 14 (6.4) | 9 (6.5) | 1.039 (0.421–2.567) | 0.934 | 0.934 | 8 (10.8) | 1.905 (0.720–5.042) | 0.194 |
| Dominant (TT vs. TG + GG) | 0.770 (0.551–1.076) | 0.125 | 0.625 | 0.852 (0.554–1.310) | 0.465 | 0.465 | 0.994 (0.584–1.693) | 0.983 | |||||
| Recessive (TT + TG vs. GG) | 0.693 (0.334–1.439) | 0.325 | 0.542 | 1.153 (0.480–2.768) | 0.751 | 0.751 | 2.051 (0.810–5.195) | 0.130 | |||||
| HWE | 0.173 | 0.097 | |||||||||||
| GG | 122 (55.7) | 262 (67.5) | 1.000 (reference) | 122 (55.7) | 96 (69.6) | 1.000 (reference) | 54 (73.0) | 1.000 (reference) | |||||
| GA | 77 (35.2) | 106 (27.3) | 0.920 (0.580–1.461) | 0.625 | 0.781 | 77 (35.2) | 36 (26.1) | 0.607 (0.375–0.982) | 0.042 | 0.118 | 17 (23.0) | 0.506 (0.273–0.940) | 0.031 |
| AA | 20 (9.1) | 20 (5.2) | 1.294 (0.700–2.394) | 0.511 | 0.511 | 20 (9.1) | 6 (4.3) | 0.392 (0.151–1.018) | 0.055 | 0.114 | 3 (4.1) | 0.345 (0.098–1.213) | 0.097 |
| Dominant (GG vs. GA + AA) | 1.006 (0.653–1.551) | 0.878 | 0.878 | 0.563 (0.358–0.885) | 0.013 | 0.055 | 0.473 (0.265–0.846) | 0.012 | |||||
| Recessive (GG + GA vs. AA) | 1.355 (0.774–2.372) | 0.288 | 0.542 | 0.464 (0.181–1.189) | 0.110 | 0.270 | 0.427 (0.123–1.486) | 0.181 | |||||
| HWE | 0.085 | 0.642 | |||||||||||
| AA | 118 (53.9) | 202 (52.1) | 1.000 (reference) | 118 (53.9) | 64 (46.4) | 1.000 (reference) | 31 (41.9) | 1.000 (reference) | |||||
| AG | 90 (41.1) | 148 (38.1) | 0.979 (0.691–1.387) | 0.905 | 0.905 | 90 (41.1) | 61 (44.2) | 1.305 (0.832–2.049) | 0.247 | 0.309 | 38 (51.4) | 1.725 (0.987–3.013) | 0.056 |
| GG | 11 (5.0) | 38 (9.8) | 2.025 (0.995–4.120) | 0.052 | 0.260 | 11 (5.0) | 13 (9.4) | 2.106 (0.888–4.994) | 0.091 | 0.114 | 5 (6.8) | 1.670 (0.538–5.187) | 0.375 |
| Dominant (AA vs. AG + GG) | 1.088 (0.780–1.517) | 0.621 | 0.776 | 1.384 (0.899–2.129) | 0.140 | 0.175 | 1.689 (0.986–2.895) | 0.056 | |||||
| Recessive (AA + AG vs. GG) | 2.006 (1.001–4.018) | 0.050 | 0.250 | 1.822 (0.787–4.219) | 0.162 | 0.270 | 1.267 (0.423–3.803) | 0.673 | |||||
| HWE | 0.238 | 0.160 | |||||||||||
| GG | 79 (36.1) | 154 (39.7) | 1.000 (reference) | 79 (36.1) | 34 (24.6) | 1.000 (reference) | 18 (24.3) | 1.000 (reference) | |||||
| GA | 104 (47.5) | 178 (45.9) | 0.875 (0.608–1.259) | 0.472 | 0.781 | 104 (47.5) | 74 (53.6) | 1.663 (1.007–2.746) | 0.047 | 0.118 | 45 (60.8) | 1.967 (1.052–3.677) | 0.034 |
| AA | 36 (16.4) | 56 (14.4) | 0.774 (0.468–1.279) | 0.318 | 0.511 | 36 (16.4) | 30 (21.7) | 1.772 (0.932–3.369) | 0.081 | 0.114 | 11 (14.9) | 1.391 (0.582–3.325) | 0.458 |
| Dominant (GG vs. GA + AA) | 0.856 (0.608–1.207) | 0.376 | 0.627 | 1.746 (1.082–2.818) | 0.022 | 0.055 | 1.856 (1.013–3.400) | 0.045 | |||||
| Recessive (GG + GA vs. AA) | 0.833 (0.526–1.319) | 0.436 | 0.545 | 1.309 (0.757–2.263) | 0.336 | 0.420 | 0.860 (0.412–1.799) | 0.689 | |||||
| HWE | 0.857 | 0.694 |
Note: AORs were adjusted for age of participants. RPL, recurrent pregnancy loss; AOR, adjusted odds ratio; CI, confidence interval; FDR-P, false discovery rate-adjusted p-value.
Genotype combinations of GP6 polymorphisms in control participants and (RPL) patients.
| Genotypes | Controls ( | RPL Patients ( | AOR (95% CI) |
|
|
|---|---|---|---|---|---|
| GP6 rs1654410/GP6 rs1671153 | |||||
| TT/TT | 53 (24.2) | 107 (27.6) | 1.000 (reference) | ||
| TT/TG | 43 (19.6) | 61 (15.7) | 0.687 (0.411–1.146) | 0.150 | 0.750 |
| CC/TT | 15 (6.8) | 10 (2.6) | 0.333 (0.140–0.792) | 0.013 | 0.039 |
| CC/GG | 2 (0.9) | 1 (0.3) | 0.254 (0.022–2.873) | 0.268 | 0.402 |
| GP6 rs1654410/GP6 rs1654419 | |||||
| TT/GG | 51 (23.3) | 109 (28.1) | 1.000 (reference) | ||
| TT/AA | 15 (6.8) | 10 (2.6) | 0.276 (0.113–0.674) | 0.005 | 0.015 |
| CC/GG | 15 (6.8) | 19 (4.9) | 0.662 (0.307–1.430) | 0.294 | 0.725 |
| CC/GA | 7 (3.2) | 3 (0.8) | 0.202 (0.050–0.813) | 0.024 | 0.048 |
| CC/AA | 1 (0.5) | 1 (0.3) | 0.443 (0.027–7.270) | 0.569 | 0.569 |
| GP6 rs1654410/GP6 rs12610286 | |||||
| TT/AA | 48 (21.9) | 100 (25.8) | 1.000 (reference) | ||
| TT/AG | 48 (21.9) | 57 (14.7) | 0.570 (0.339–0.957) | 0.033 | 0.132 |
| CC/AG | 11 (5.0) | 10 (2.6) | 0.451 (0.176–1.153) | 0.096 | 0.243 |
| CC/GG | 12 (5.5) | 13 (3.4) | 0.540 (0.228–1.280) | 0.162 | 0.243 |
| GP6 rs1654410/GP6 rs1654431 | |||||
| TT/GG | 35 (16.0) | 74 (19.1) | 1.000 (reference) | ||
| TT/GA | 57 (26.0) | 78 (20.1) | 0.640 (0.377–1.087) | 0.099 | 0.396 |
| CC/GG | 10 (4.6) | 6 (1.5) | 0.282 (0.094–0.852) | 0.025 | 0.100 |
| GP6 rs1671153/GP6 rs1654419 | |||||
| TT/GG | 73 (33.3) | 142 (36.6) | 1.000 (reference) | ||
| TG/AA | 12 (5.5) | 10 (2.6) | 0.391 (0.157–0.974) | 0.044 | 0.132 |
| GG/GA | 6 (2.7) | 5 (1.3) | 0.444 (0.131–1.511) | 0.194 | 0.291 |
| GP6 rs1671153/GP6 rs12610286 | |||||
| TT/AA | 53 (24.2) | 122 (31.4) | 1.000 (reference) | ||
| TT/AG | 52 (23.7) | 66 (17.0) | 0.556 (0.342–0.905) | 0.018 | 0.072 |
| TG/AG | 44 (20.1) | 59 (15.2) | 0.604 (0.362–1.007) | 0.053 | 0.106 |
| GP6 rs1671153/GP6 rs1654431 | |||||
| TT/GG | 56 (25.6) | 85 (21.9) | 1.000 (reference) | ||
| TT/AA | 6 (2.7) | 33 (8.5) | 3.476 (1.360–8.885) | 0.009 | 0.036 |
| TG/GG | 29 (13.2) | 54 (13.9) | 1.224 (0.697–2.151) | 0.482 | 0.699 |
| GP6 rs1654419/GP6 rs12610286 | |||||
| GG/AA | 69 (31.5) | 133 (34.3) | 1.000 (reference) | ||
| AA/GG | 7 (3.2) | 29 (7.5) | 2.065 (0.857–4.977) | 0.106 | 0.265 |
| GA/AG | 36 (16.4) | 41 (10.6) | 0.594 (0.348–1.014) | 0.056 | 0.265 |
| GA/AG | 11 (5.0) | 4 (1.0) | 0.181 (0.055–0.595) | 0.005 | 0.015 |
| GP6 rs1654419/GP6 rs1654431 | |||||
| GG/GG | 58 (26.5) | 92 (23.7) | 1.000 (reference) | ||
| AA/AA | 13 (5.9) | 49 (12.6) | 2.203 (1.091–4.447) | 0.028 | 0.112 |
| AA/AA | 7 (3.2) | 17 (4.4) | 1.535 (0.600–3.931) | 0.371 | 0.543 |
| GP6 rs12610286/GP6 rs1654431 | |||||
| AA/GG | 44 (20.1) | 78 (20.2) | 1.000 (reference) | ||
| GG/AA | 8 (3.7) | 34 (8.8) | 2.373 (1.004–5.608) | 0.049 | 0.196 |
| AG/GA | 51 (23.3) | 62 (16.0) | 0.685 (0.406–1.156) | 0.157 | 0.314 |
Note: RPL, recurrent pregnancy loss; AOR, adjusted odds ratio; CI, confidence interval; a, Fisher’s exact test; b, FDR-adjusted p value.
Interaction of RPL incidence and environmental factors.
| Characteristics | GP6 rs1654410 (TT vs. TC + CC) | GP6 rs1671153 (TT vs. TG + GG) | GP6 1654419 (GG + GA vs. AA) | GP6 rs12610286 (AA + AG vs. GG) | GP6 rs1654431 (GG + GA vs. AA) | |||||
|---|---|---|---|---|---|---|---|---|---|---|
| AOR (95% CI) * |
| AOR (95% CI) * |
| AOR (95% CI) * |
| AOR (95% CI) * |
| AOR (95% CI) * |
| |
|
| ||||||||||
| <32 | 1.389 (0.810–2.383) | 0.233 | 0.944 (0.551–1.617) | 0.833 | 1.672 (0.950–2.944) | 0.075 | 0.888 (0.518–1.520) | 0.664 | 1.291 (0.747–2.229) | 0.360 |
| ≥32 | 0.789 (0.516–1.207) | 0.274 | 1.280 (0.835–1.961) | 0.258 | 1.151 (0.738–1.795) | 0.536 | 0.908 (0.595–1.384) | 0.653 | 1.156 (0.749–1.783) | 0.513 |
| BMI | ||||||||||
| <25 kg/m2 | 1.325 (0.798–2.200) | 0.277 | 0.821 (0.495–1.362) | 0.445 | 0.860 (0.520–1.423) | 0.558 | 1.320 (0.795–2.193) | 0.284 | 0.784 (0.463–1.328) | 0.365 |
| ≥25 kg/m2 | 0.434 (0.099–1.893) | 0.267 | 1.433 (0.365–5.623) | 0.606 | 2.398 (0.544–10.571) | 0.248 | 0.487 (0.118–2.006) | 0.319 | 1.245 (0.307–5.041) | 0.759 |
| Platelet | ||||||||||
| <242.11 × 103 cell | 0.908 (0.498–1.655) | 0.752 | 1.078 (0.586–1.981) | 0.810 | 1.056 (0.578–1.931) | 0.859 | 0.841 (0.462–1.532) | 0.572 | 1.294 (0.710–2.356) | 0.400 |
| ≥242.11 × 103 cell | 1.108 (0.622–1.973) | 0.728 | 1.267 (0.711–2.258) | 0.422 | 4.461 (2.234–8.905) | 0.0001 | 0.691 (0.389–1.225) | 0.205 | 1.184 (0.657–2.133) | 0.575 |
| PT | ||||||||||
| ≥0.84 s | 1.447 (0.314–6.666) | 0.635 | 0.596 (0.114–3.127) | 0.541 | 1.897 (0.389–9.251) | 0.429 | 0.335 (0.056–2.006) | 0.231 | 0.803 (0.170–3.782) | 0.781 |
| <0.84 s | 1.208 (0.533–2.740) | 0.651 | 0.630 (0.274–1.448) | 0.277 | 0.696 (0.306–1.582) | 0.387 | 0.844 (0.372–1.913) | 0.684 | 0.761 (0.314–1.843) | 0.545 |
| aPTT | ||||||||||
| <33.05 s | 1.074 (0.486–2.370) | 0.861 | 0.598 (0.265–1.350) | 0.216 | 1.272 (0.567–2.852) | 0.559 | 0.963 (0.435–2.132) | 0.926 | 1.061 (0.463–2.432) | 0.890 |
| ≥33.05 s | 1.754 (0.664–4.630) | 0.257 | 0.723 (0.272–1.924) | 0.516 | 0.915 (0.349–2.396) | 0.856 | 0.781 (0.299–2.043) | 0.615 | 0.711 (0.259–1.950) | 0.507 |
| FSH | ||||||||||
| <8.13 mIU/mL | 1.013 (0.579–1.772) | 0.965 | 0.833 (0.479–1.447) | 0.516 | 2.716 (1.458–5.057) | 0.002 | 0.685 (0.393–1.192) | 0.181 | 0.950 (0.531–1.700) | 0.862 |
| ≥8.13 mIU/mL | 0.906 (0.382–2.150) | 0.822 | 0.672 (0.283–1.595) | 0.367 | 0.921 (0.381–2.226) | 0.855 | 0.880 (0.365–2.121) | 0.776 | 2.842 (0.857–9.424) | 0.088 |
| LH | ||||||||||
| <3.38 mIU/mL | 1.427 (0.702–2.901) | 0.326 | 1.195 (0.590–2.420) | 0.622 | 2.047 (0.963–4.351) | 0.063 | 0.731 (0.361–1.482) | 0.385 | 0.764 (0.359–1.628) | 0.485 |
| ≥3.38 mIU/mL | 0.713 (0.370–1.374) | 0.312 | 0.540 (0.284–1.025) | 0.060 | 1.707 (0.883–3.298) | 0.112 | 0.802 (0.421–1.527) | 0.502 | 1.311 (0.642–2.677) | 0.457 |
| E2 | ||||||||||
| <26.00 pg/mL | 1.439 (0.720–2.880) | 0.303 | 0.685 (0.342–1.372) | 0.285 | 2.322 (1.134–4.755) | 0.021 | 0.510 (0.247–1.050) | 0.068 | 0.874 (0.400–1.911) | 0.736 |
| ≥26.00 pg/mL | 0.795 (0.404–1.563) | 0.506 | 0.840 (0.429–1.647) | 0.612 | 1.821 (0.905–3.664) | 0.093 | 0.506 (0.256–1.002) | 0.051 | 1.604 (0.785–3.280) | 0.195 |
Note: AOR, adjusted odds ratio; 95% CI, 95% confidence interval; BMI, body mass index; PLT, platelet count; PT, prothrombin time; aPTT, activated par tial thromboplastin time; FSH, follicle stimulating hormone; LH, luteinizing hormone; E2, estradiol. The adjusted odds ratio on the basis of risk factors, such as age, BMI, PLT, PT, aPTT, FSH, LH, and E2.