Literature DB >> 32746353

Fully Integrated Time-Gated 3D Fluorescence Imager for Deep Neural Imaging.

Jaebin Choi, Adriaan J Taal, William L Meng, Eric H Pollmann, John W Stanton, Changhyuk Lee, Sajjad Moazeni, Laurent C Moreaux, Michael L Roukes, Kenneth L Shepard.   

Abstract

This paper presents a device for time-gated fluorescence imaging in the deep brain, consisting of two on-chip laser diodes and 512 single-photon avalanche diodes (SPADs). The edge-emitting laser diodes deliver fluorescence excitation above the SPAD array, parallel to the imager. In the time domain, laser diode illumination is pulsed and the SPAD is time-gated, allowing a fluorescence excitation rejection up to O.D. 3 at 1 ns of time-gate delay. Each SPAD pixel is masked with Talbot gratings to enable the mapping of 2D array photon counts into a 3D image. The 3D image achieves a resolution of 40, 35, and 73 μm in the x, y, and z directions, respectively, in a noiseless environment, with a maximum frame rate of 50 kilo-frames-per-second. We present measurement results of the spatial and temporal profiles of the dual-pulsed laser diode illumination and of the photon detection characteristics of the SPAD array. Finally, we show the imager's ability to resolve a glass micropipette filled with red fluorescent microspheres. The system's 420 μm-wide cross section allows it to be inserted at arbitrary depths of the brain while achieving a field of view four times larger than fiber endoscopes of equal diameter.

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Year:  2020        PMID: 32746353      PMCID: PMC7528638          DOI: 10.1109/TBCAS.2020.3008513

Source DB:  PubMed          Journal:  IEEE Trans Biomed Circuits Syst        ISSN: 1932-4545            Impact factor:   3.833


  22 in total

1.  Light field image sensors based on the Talbot effect.

Authors:  Albert Wang; Patrick Gill; Alyosha Molnar
Journal:  Appl Opt       Date:  2009-11-01       Impact factor: 1.980

Review 2.  Optical properties of biological tissues: a review.

Authors:  Steven L Jacques
Journal:  Phys Med Biol       Date:  2013-05-10       Impact factor: 3.609

3.  Direct integration of micro-LEDs and a SPAD detector on a silicon CMOS chip for data communications and time-of-flight ranging.

Authors:  J F C Carreira; A D Griffiths; E Xie; B J E Guilhabert; J Herrnsdorf; R K Henderson; E Gu; M J Strain; M D Dawson
Journal:  Opt Express       Date:  2020-03-02       Impact factor: 3.894

4.  Minimally invasive multimode optical fiber microendoscope for deep brain fluorescence imaging.

Authors:  Shay Ohayon; Antonio Caravaca-Aguirre; Rafael Piestun; James J DiCarlo
Journal:  Biomed Opt Express       Date:  2018-03-06       Impact factor: 3.732

5.  A Vertically Integrated CMOS Microsystem for Time-Resolved Fluorescence Analysis.

Authors:  Bruce R Rae; Jonathan McKendry; David Renshaw; John M Girkin; Martin D Dawson; R K Henderson
Journal:  IEEE Trans Biomed Circuits Syst       Date:  2010-12       Impact factor: 3.833

6.  Fully Integrated Time-Gated 3D Fluorescence Imager for Deep Neural Imaging.

Authors:  Jaebin Choi; Adriaan J Taal; William L Meng; Eric H Pollmann; John W Stanton; Changhyuk Lee; Sajjad Moazeni; Laurent C Moreaux; Michael L Roukes; Kenneth L Shepard
Journal:  IEEE Trans Biomed Circuits Syst       Date:  2020-07-10       Impact factor: 3.833

7.  A Single-Photon Avalanche Diode Array for Fluorescence Lifetime Imaging Microscopy.

Authors:  David Eric Schwartz; Edoardo Charbon; Kenneth L Shepard
Journal:  IEEE J Solid-State Circuits       Date:  2008-11-21       Impact factor: 5.013

8.  Superresolution imaging of chemical synapses in the brain.

Authors:  Adish Dani; Bo Huang; Joseph Bergan; Catherine Dulac; Xiaowei Zhuang
Journal:  Neuron       Date:  2010-12-09       Impact factor: 17.173

9.  Subcellular spatial resolution achieved for deep-brain imaging in vivo using a minimally invasive multimode fiber.

Authors:  Sebastian A Vasquez-Lopez; Raphaël Turcotte; Vadim Koren; Martin Plöschner; Zahid Padamsey; Martin J Booth; Tomáš Čižmár; Nigel J Emptage
Journal:  Light Sci Appl       Date:  2018-12-19       Impact factor: 17.782

10.  Highly sensitive lens-free fluorescence imaging device enabled by a complementary combination of interference and absorption filters.

Authors:  Kiyotaka Sasagawa; Ayaka Kimura; Makito Haruta; Toshihiko Noda; Takashi Tokuda; Jun Ohta
Journal:  Biomed Opt Express       Date:  2018-08-17       Impact factor: 3.732

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  4 in total

Review 1.  Integrated Neurophotonics: Toward Dense Volumetric Interrogation of Brain Circuit Activity-at Depth and in Real Time.

Authors:  Laurent C Moreaux; Dimitri Yatsenko; Wesley D Sacher; Jaebin Choi; Changhyuk Lee; Nicole J Kubat; R James Cotton; Edward S Boyden; Michael Z Lin; Lin Tian; Andreas S Tolias; Joyce K S Poon; Kenneth L Shepard; Michael L Roukes
Journal:  Neuron       Date:  2020-10-14       Impact factor: 17.173

2.  Optics-Free Chip-Scale Intraoperative Imaging Using NIR-Excited Upconverting Nanoparticles.

Authors:  Hossein Najafiaghdam; Cassio C S Pedroso; Bruce E Cohen; Mekhail Anwar
Journal:  IEEE Trans Biomed Circuits Syst       Date:  2022-05-19       Impact factor: 5.234

3.  Fully Integrated Time-Gated 3D Fluorescence Imager for Deep Neural Imaging.

Authors:  Jaebin Choi; Adriaan J Taal; William L Meng; Eric H Pollmann; John W Stanton; Changhyuk Lee; Sajjad Moazeni; Laurent C Moreaux; Michael L Roukes; Kenneth L Shepard
Journal:  IEEE Trans Biomed Circuits Syst       Date:  2020-07-10       Impact factor: 3.833

4.  Confocal-based fluorescence fluctuation spectroscopy with a SPAD array detector.

Authors:  Eli Slenders; Marco Castello; Mauro Buttafava; Federica Villa; Alberto Tosi; Luca Lanzanò; Sami Valtteri Koho; Giuseppe Vicidomini
Journal:  Light Sci Appl       Date:  2021-02-05       Impact factor: 17.782

  4 in total

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